ELASPIC home << Job #oncokb << P20936.Y472H
x
Choose which mutations you want to be shown in the result table below.
Reset to show everything.
x
Status of calculations
: Completed with success
: Mutation not in domain
: Running
: In task queue
: Error
When calculations are done, you can click on each mutation to see their detailed results.
x
Try again
can be rerun by clicking the button:
RERUN
For more information about the error, contact us.
x
ELASPIC ΔΔG
The final Gibbs free energy change (ΔΔG) in kcal/mol is predicted using more than 70 sequential, molecular and energetic features with the Stochastic Gradient Boosting of Decision Trees algorithm.
For more information see the ELASPIC publication.
x
ELASPIC2 (EL2) score
The ELASPIC2 (EL2) score is obtained using features generated by pretrained ProteinSolver and ProtBert neural networks with the Stochastic Gradient Boosting of Decision Trees algorithm and a ranking objective function.
For more information see the ELASPIC2 (EL2) publication.

P20936.Y472H

Detailed results for job #oncokb produced by ELASPIC
P20936, Ras GTPase-activating protein 1:
Y472H
1
1047
SH2
C2+RasGAP
SH2
SH..
PH
RAB5A, Ras-related protein Rab-5A:
1
215
Ras
Select affected interaction:

Switch to the slower HTML5 mode if the applet isn't showing.
Set mode: JAVA | HTML5
Set quality: Best | Normal | Worst
Model: Wild-type | Mutant | Both
Protein: P20936 | RAB5A | Cofactors | All
Center camera: Protein | Mutation
Clone in larger window
Cartoon: On | Off | Translucent
Sticks: On | Off | Within Å:
Labels: On | Off | Only sticks

P20936.Y472H

Completed successfully

Protein, domain: P20936 PH

Interacting with: RAB5A Ras

PDB templates used: 4kax_B, 4kax_A

Seq identity: 0.319, 0.282 Model score: -0.374

ELASPIC ΔΔG: -0.421

ELASPIC2 (EL2) score: -0.858

Mutation run by user.

Download:  PDBwt   | PDBmut

Citation

If you use these results, please cite the papers on this page.