>gi|24797074|ref|NP_291032.2| HLA class II histocompatibility antigen, DP alpha 1 chain precursor [Homo sapiens] >gi|335883185|ref|NP_001229453.1| HLA class II histocompatibility antigen, DP alpha 1 chain precursor [Homo sapiens] >gi|335883187|ref|NP_001229454.1| HLA class II histocompatibility antigen, DP alpha 1 chain precursor [Homo sapiens] >gi|122204|sp|P20036.1|DPA1_HUMAN RecName: Full=HLA class II histocompatibility antigen, DP alpha 1 chain; AltName: Full=DP(W3); AltName: Full=DP(W4); AltName: Full=HLA-SB alpha chain; AltName: Full=MHC class II DP3-alpha; AltName: Full=MHC class II DPA1; Flags: Precursor [Homo sapiens] >gi|673417|emb|CAA26887.1| class II antigen [Homo sapiens] >gi|703089|gb|AAA63220.1| MHC class II DP3-alpha [Homo sapiens] >gi|119624074|gb|EAX03669.1| major histocompatibility complex, class II, DP alpha 1, isoform CRA_a [Homo sapiens] >gi|119624075|gb|EAX03670.1| major histocompatibility complex, class II, DP alpha 1, isoform CRA_a [Homo sapiens] >gi|119624076|gb|EAX03671.1| major histocompatibility complex, class II, DP alpha 1, isoform CRA_a [Homo sapiens] >gi|158258855|dbj|BAF85398.1| unnamed protein product [Homo sapiens] >gi|607346720|gb|AHW47949.1| MHC class II antigen [Homo sapiens] >gi|607346756|gb|AHW47983.1| MHC class II antigen [Homo sapiens]
MRPEDRMFHIRAVILRALSLAFLLSLRGAGAIKADHVSTYAAFVQTHRPTGEFMFEFDEDEMFYVDLDKKETVWHLEEFG
QAFSFEAQGGLANIAILNNNLNTLIQRSNHTQATNDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGELVT
EGVAESLFLPRTDYSFHKFHYLTFVPSAEDFYDCRVEHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIVG
TVLIIKSLRSGHDPRAQGTL
>gi|607346738|gb|AHW47966.1| MHC class II antigen [Homo sapiens]
MRPEDRMFHIRAVILRALSLAFLLSLRGAGAIKADHVSTYAAFVQTHRPTGEFMFEFDDDEMFYVDLDKKETVWHLEEFG
QAFSFEAQGGLANIAILNNNLNTLIQRSNHTQATNDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGELVT
EGVAESLFLPRTDYSFHKFHYLTFVPSAEDFYDCRVEHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIVG
TVLIIKSLRSGHDPRAQGTL
>gi|14602923|gb|AAH09956.1| HLA-DPA1 protein [Homo sapiens] >gi|123993575|gb|ABM84389.1| major histocompatibility complex, class II, DP alpha 1 [synthetic construct] >gi|123999556|gb|ABM87323.1| major histocompatibility complex, class II, DP alpha 1 [synthetic construct] >gi|307684626|dbj|BAJ20353.1| major histocompatibility complex, class II, DP alpha 1 [synthetic construct] >gi|607346702|gb|AHW47932.1| MHC class II antigen [Homo sapiens] >gi|649136027|gb|AIC59007.1| HLA-DPA1, partial [synthetic construct]
MRPEDRMFHIRAVILRALSLAFLLSLRGAGAIKADHVSTYAAFVQTHRPTGEFMFEFDEDEQFYVDLDKKETVWHLEEFG
RAFSFEAQGGLANIAILNNNLNTLIQRSNHTQAANDPPEVTVFPKEPVELGQPNTLICHIDRFFPPVLNVTWLCNGEPVT
EGVAESLFLPRTDYSFHKFHYLTFVPSAEDVYDCRVEHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIVG
TVLIIKSLRSGHDPRAQGPL
>gi|385274819|emb|CCH26301.1| MHC class II antigen [Homo sapiens]
MRPEDRMFHIRAVILRALSLAFLLSLRGAGAIKADHVSTYAMFVQTHRPTGEFMFEFDEDEQFYVDLDKKETVWHLEEFG
RAFSFEAQGGLANIAILNNNLNTLIQRSNHTQAANDPPEVTVFPKEPVELGQPNTLICHIDRFFPPVLNVTWLCNGEPVT
EGVAESLFLPRTDYSFHKFHYLTFVPSAEDVYDCRVEHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIVG
TVLIIKSLRSGHDPRAQGPL
>gi|397474348|ref|XP_003808644.1| PREDICTED: HLA class II histocompatibility antigen, DP alpha 1 chain-like isoform 1 [Pan paniscus] >gi|397474350|ref|XP_003808645.1| PREDICTED: HLA class II histocompatibility antigen, DP alpha 1 chain-like isoform 2 [Pan paniscus] >gi|397474352|ref|XP_003808646.1| PREDICTED: HLA class II histocompatibility antigen, DP alpha 1 chain-like isoform 3 [Pan paniscus]
MRPEDRMFHIRAVIFRALSLAFLLSLRGAGAIKADHVSTYAAFVQTHRPTGEFMFEFDEDEMFYVDLDKKETVWHLEEFG
RAFSFEAQGGLANIAILNNNLNILIQRSNHTQAANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGEPVT
EGVAESLFLPRTDYSFHKFHYLTFVPSAEDFYDCKVEHWGLDQPLLKHWEAQEPIQMPETRETVLCALGLVLGLVGIIVG
TILIIKSLRSGRDPRAQGPL
>gi|426352691|ref|XP_004043843.1| PREDICTED: HLA class II histocompatibility antigen, DP alpha 1 chain-like isoform 1 [Gorilla gorilla gorilla] >gi|426352693|ref|XP_004043844.1| PREDICTED: HLA class II histocompatibility antigen, DP alpha 1 chain-like isoform 2 [Gorilla gorilla gorilla] >gi|426352695|ref|XP_004043845.1| PREDICTED: HLA class II histocompatibility antigen, DP alpha 1 chain-like isoform 3 [Gorilla gorilla gorilla]
MRPEDRMLHIRAVILRALSLAFLLSLRGAGAIKADHVSTYAMFVQTHRPTGEFMFEFDEDEMFYVDLDKKETVWHLEEFG
RAFSFEAQGGLANIAILNNNLNITIQCSNHTQAANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGEPVT
EGVAESLFLPRTDYSFHKFHYLTFVPSAEDFYDCRVEHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIVG
TVLIIKSLRSGRDPRAQGPL
>gi|167717358|gb|ABZ91892.1| MHC class II antigen [Macaca mulatta]
MDINYRPHNVCPEDRMFQTRAIVLRTLSLAFLLSLRGAGAIKADHVSTYAAFVQTHRPTGEFMFEFDEDEMFYVDLDKKE
TVWHLEEFGQAISFEAQGGLANIAILNHNLNITIQRSNYTQAANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVT
WLCNGEPVTEGVAESLFLPRTDYSFHKFHYLTFVPSAEDYYDCRVEHWGLDQPLLKHWEAQEPIQIPETTETVLCALGLV
LGLVGIIVGTVLIIKSLRSGRDPRAQGPL
>gi|523704007|emb|CDF66302.1| MHC class II antigen, partial [Macaca fascicularis] >gi|523704015|emb|CDF66306.1| MHC class II antigen, partial [Macaca mulatta]
VCPEDRMFQTRAVILRALSWAFLLSLRGAGAIKADHVSTYASFVQTHRPTGEFMFEFDEDEMFYVDLDKKETVWHLEEFG
RAFSFEAQGGLANIAALNHNLNTLIQRSNHTQAANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGEPVT
EGVAESLFLPRTDYRLHKFHYLTFVPSAEDFYDCRVEHWGLDQPLLKHWEAQEPIQMPETRETVLCALGLVLGLVGIIVG
TVLIIKSLRSGRDPRAQGPL
>gi|124244251|gb|ABM92291.1| MHC class II antigen [Macaca mulatta]
MDINYRPHNVCPEDRMFQTRAIVLRTLSLAFLLSLRGAGAIKADHVSTYAMFVQTHRPTGEFMFEFDEDEMFYVDLDKKE
TVWHLEEFGQAISFEAQGGLANIAILNHNLNITIQRSNYTQAANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVT
WLCNGEPVTEGVAESLFLPRTDYSFHKFHYLTFVPSAEDYYDCRVEHWGLDQPLLKHWEAQEPIQIPETTETVLCALGLV
LGLVGIIVGTVLIIKSLRSGRDPRAQGPL
>gi|554505437|emb|CDH93747.1| MHC class II antigen [Macaca mulatta]
MRPEDRMFQTRAVILRTLSLAFLLSLGGAGAIKADHVSTYALFVQTHRPTGEYMFEFDEDEMFYVDLDKKETVWHLEEFG
RAFSFEAQGGLDDIATLKYNLNITIQRSNHTQAANDPPEVMVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGEPVT
EGVAESLFLPRTDYSFHKFHYLTFVPSAEDFYDCRVEHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIVG
TILIIKSLRSGRDPRAQGPL
>gi|125995307|dbj|BAF47200.1| MHC class II DPA [Macaca mulatta] >gi|337272800|gb|AEI70160.1| MHC class II antigen [Macaca fascicularis] >gi|339333285|emb|CBX60098.1| MHC class II antigen [Macaca fascicularis] >gi|532164641|emb|CDG23820.1| MHC class II antigen [Macaca mulatta]
MCPEDRMFQTRAVILRTLSLAFLLSLRGAGAIKADHVSTYAMFVQTHRPTGEFMFEFDEDEMFYVDLDKKETVWHLEEFG
RAFSFEAQGGLANIAALNHNLNTLIQLSNHTPAANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGEPVT
EGVAESLFLPRTDYRLHKFHYLTFVPSAEDFYDCRVEHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIVG
SILILKAMRSGRDPRAQGPL
>gi|532690600|emb|CDG23821.2| MHC class II antigen [Macaca mulatta]
MCPEDRMFQTRAVILRTLSLAFLLSLRGAGAIKADHVSTYAMFVQTHRPTGEFMFEFDEDEMFYVDLDKKETVWHLEEFG
RAFSFEAQGGLANIAALNHNLNTLIQLSNHTPAANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGEPVT
EGVAESLFLPRTDYRLHKFHYLTFVPSAEDYYDCRVEHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIVG
SILILKAMRSGRDPRAQGPL
>gi|125488976|gb|ABN42649.1| MHC class II antigen DP alpha chain [Macaca fascicularis]
MCPEDRMFQTRSVILRTLSLAFLLSLRGAGAIKADHVSTYALFVQTHRPTGEYMFEFDEDEQFYVDLDKKETVWHLEEFG
RAFSFEAQGGLDDIATLKYNLNITIQRSNHTQAANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGEPVT
EGVAESLFLPRTDYSFHKFHYLTFVPSAEDFYDCRVEHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIVG
TVLIIKSLRSGRDPRAQGPL
>gi|167717356|gb|ABZ91891.1| MHC class II antigen [Macaca mulatta]
MCPEDRMFQTRSVILRTLSLAFLLSLRGAGAIKADHVSTYALFVQTHRPTGEYMFEFDEDEMFYVDLDKKETVWHLEEFG
RAFSFEAQGGLDDIATLKYNLNITIQRSNHTQAANDPPEVMVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGEPVT
EGVAESLFLPRTDYSFHKFHYLTFVPSAEDFYDCRVEHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIVG
TILIIKSLRSGRDPRAQGPL
>gi|124244245|gb|ABM92288.1| MHC class II antigen [Macaca mulatta]
MFQTRAVILRALSWAFLLSLRGAGAIKADHVSTYASFVQTHRPTGEFMFEFDEDEMFYVDLDKKETVWHLEEFGRAFSFE
AQGGLANIAALNHNLNTLIQRSNHTQAANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGEPVTEGVAES
LFLPRTDYRLHKFHYLTFVPSAEDFYDCRVEHWGLDQPLLKHWEAQEPIQMPETRETVLCALGLVLGLVGIIVGTVLIIK
SLRSGRDPRAQGPL
>gi|220681930|gb|ACL80123.1| MHC class II antigen [Macaca mulatta]
MRPEDRMFQTRAVILRTLSLAFLLSLRGAGAIKADHVLTFTTFVQTHRPTGEYMYELDEDEMFFVDLDKKETIWHLEEFG
RAFSFEAQGGLANIAISNNNLNVTIQLSNHTQATNDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGQPVT
EGVTESLFLPRTDYSFHKFHYLTFVPSAEDYYDCRVEHWGLDQPLLKHWEPQEPIQMPETTETVLCALGLVLGLVGIIVG
TVLIIKSLRSGRDPRAQGPL
>gi|554505447|emb|CDH93752.1| MHC class II antigen [Macaca mulatta]
MRPEDRMFQTRAVILRTLSLAFLLSLRGAGAIKADHVLTFTTFVQTHRPTGEYMYELDEDEIFFVDLDKKETIWHLEEFG
QAFSFEAQGGLANIAISNNNLNVTIQLSNHTQATNDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGQPVT
EGVTESLFLPRTDYSFHKFHYLTFVPSAEDYYDCRVEHWGLDQPLLKHWEPQEPIQMPETTETVLCALGLVLGLVGIIVG
TVLIIKSLRSGRDPRAQGPL
>gi|125488980|gb|ABN42651.1| MHC class II antigen DP alpha chain [Macaca fascicularis] >gi|310789293|gb|ADP24748.1| MHC class II antigen [Macaca mulatta] >gi|496629049|gb|AGL45571.1| MHC class II antigen [Macaca fascicularis] >gi|671708629|gb|AII81831.1| MHC class II antigen [Macaca nemestrina]
MRPEDRMFQTRAVILRTLSLAFLLSLRGAGAIKADHVLTFTTFVQTHRPTGEFMYELDEDEIFFVDLDKKETIWHLEEFG
RAFSFEAQGGLANIAISNNNLNVTIQLSNHTQATNDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGQPVT
EGVTESLFLPRTDYSFHKFHYLTFVPSAEDYYDCRVEHWGLDQPLLKHWEPQEPIQMPETTETVLCALGLVLGLVGIIVG
TVLIIKSLRSGRDPRAQGPL
>gi|338176949|gb|AEI83873.1| MHC class II antigen [Macaca fascicularis]
MFQTRAIVLRTLSLAFLLSLRGAGAIKADHVSTYAMFVQTHRPTGEFMFEFDEDEMFYVDLDKKETVWHLEEFGQAISFE
AQGGLANIAILNHNLNITIQRSNYTQAANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGEPVTEGVAES
LFLPRTDYSFHKFHYLTFVPSAEDYYDCRVEHWGLDQPLLKHWEAQEPIQIPETTETVLCALGLVLGLVGIIVGTVLIIK
SLRSGRDPRAQGPL
>gi|554505439|emb|CDH93748.1| MHC class II antigen [Macaca mulatta]
MCPEDRMFQTRAVILRTLSLAFLLSLRGAGAIKADHVSTYAMFVQTHGPTGEFMFEFDEDEMFYVDLDKKETVWHLEEFG
RAFSFEAQGGLANIAALNHNLNTLIQLSNHTPAANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGEPVT
EGVAESLFLPRTDYRLHKFHYLTFVPSAEDYYDCRVEHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIVG
SILILKAMRSGRDPRAQGPL
>gi|259027654|gb|ACV91088.1| MHC class II antigen [Macaca mulatta] >gi|337272810|gb|AEI70165.1| MHC class II antigen [Macaca fascicularis] >gi|532164637|emb|CDG23818.1| MHC class II antigen [Macaca mulatta] >gi|549084813|emb|CDG57904.1| MHC class II protein [Macaca nemestrina] >gi|549084815|emb|CDG57905.1| MHC class II protein [Macaca nemestrina] >gi|671708631|gb|AII81832.1| MHC class II antigen [Macaca nemestrina]
MRPEDRMFQTRAVILRTLSLAFLLSLRGAGAIKADHVLTFTTFVQTHRPTGEYMYELDEDEIFFVDLDKKETIWHLEEFG
RAFSFEAQGGLANIAISNNNLNVTIQLSNHTQATNDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGQPVT
EGVTESLFLPRTDYSFHKFHYLTFVPSAEDYYDCRVEHWGLDQPLLKHWEPQEPIQMPETTETVLCALGLVLGLVGIIVG
TVLIIKSLRSGRDPRAQGPL
>gi|554505445|emb|CDH93751.1| MHC class II antigen [Macaca mulatta]
MRPEDRMFQTRAVILRTLSLAFLLSLRGAGAIKADHVLTFTTFVQTHRPTGEYMYELDEDEIFFVDLDKKETIWHLEEFG
RAFSFEAQGGLANIAISNNNLNVTIQLSNHTQATNDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGQPVT
EGVTESLFLPRTDYSFHKFHYLTFVPSAEDYYDCRVEHWGLDQPLLKHWEPQEPIQMPETTETVLCALGLVLGLVGIIVG
TVLIIKSLRSGCDPRAQGPL
>gi|532164625|emb|CDG23812.1| MHC class II antigen [Macaca mulatta]
MRPEDRMFQTRAVILRTLSLAFLLSLGGAGAIKADHVSTYAMFVQTHRPTGEYMFEFDEDEMFYVDLDKKETVWHLEEFG
RAFSFEAQGGLASIAILNNNLNNTIQRSNYTQAANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGQPVT
EGVAESLFLPRTDYSFHKFHYLTFVPSAEDYYDCRVEHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIVG
TVLIIKSLRSGRDPRAQGPL
>gi|523704009|emb|CDF66303.1| MHC class II antigen, partial [Macaca fascicularis]
RMFQTRAVILRTLSLAFLLSLRGAGAIKADHVSTYAMFVQTHRPTGEFMFEFDEDEMFYVDLDKKETVWHLEEFGRAFSF
EAQGGLANIAALNHNLNTLIQLSNHTPAASDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGEPVTEGVAE
SLFLPRTDYRLHKFHYLTFVPSAEDFYDCRVEHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIVGSILIL
KAMRSGRDPRAQGPL
>gi|549084821|emb|CDG57908.1| MHC class II protein, partial [Macaca nemestrina]
VCPEDRMFQTRAVILRALSLAFLLSLRGAGAIKADHVSTYASFVQTHRPTGEYMFEFDEDEMFYVDLDKKETVWHLEEFG
RAFSFEAQGGLANIAALNHNLNTLIQRSNHTQAANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGEPVT
EGVAESLFLPRTDYRLHKFHYLTFVPSAEDFYDCRVEHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIVG
TVLIIKSLRSGRDPRAQGPL
>gi|629265954|dbj|BAO74096.1| major histocompatibility complex class II antigen DPA [Macaca fascicularis]
MFQTRAVILRTLSLAFLLSLRGAGAIKADHVSTYAMFVQTHRPTGEFMFEFDEDEMFYVDLDKKETVWHLEEFGRAFSFE
AQGGLANIAALNHNLNTLIQLSNHTPAANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGEPVTEGVAES
LFLPRTDYRLHKFHYLTFVPSAEDFYDCRVEHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIVGSILILK
AMRSGRDPRAQGPL
>gi|532164649|emb|CDG23824.1| MHC class II antigen [Macaca mulatta]
MRPEDRMFQTRAVILRTLSLAFLLSLRGAGAIKADHVSTFAMFVQTHRPTGEYMSEFDEDEMLYVDLDKKETVWHLEEFG
RALFLDAQGGLANIAALNNHLNIMIQRSNHSQAANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGKLVT
KGVTESLFLPRTDYRLHKFHYLTFVPSAEDYYDCRVEHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIVG
SILILKAMRSGRDPRAQGPL
>gi|554505449|emb|CDH93753.1| MHC class II antigen, partial [Macaca mulatta]
VCPEDRMFQTRAVILRALSLAFLLSLRGAGAIKADHVSTYASFVQTHRPTGEYMFEFDEDEMFYVDLDKKETVWHLEEFG
RAFSFEAQGGLANIAALNHNLNTLIQRSNHTQAANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGEPVT
EGVAESLFLPRTDYRLHKFHYLTFVPSAEDFYDCRVEHWGLDQPLLKHWEAQEPIQIPETTETVLCALGLVLGLVGIIVG
TVLIIKSLRSGRDPRAQGPL
>gi|339333275|emb|CBX60093.1| MHC class II antigen [Macaca fascicularis]
MRPEDRMFQTRAVILRTLSLAFLLSLRGAGAIKADHVSTFAMFVQTHRPTGEYMSEFDEDEMLYVDLDKKETVWHLEEFG
RALFLDAQGGLANIAALNNHLNIMIQRSNHSQAANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGELVT
KGVTESLFLPRTDYRLHKFHYLTFVPSAEDYYDCRVEHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIVG
SILILKAMRSGRDSRAQGPL
>gi|758100|emb|CAA25143.1| SB classII histocompatibility antigen alpha-chain [Homo sapiens]
GAGAIKADHVSTYAAFVQTHRPTGEFMFEFDEDEMFYVDLDKKETVWHLEEFGQAFSFEAQGGLANIAILNNNLNTLIQR
SNHTQATNDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGELVTEGVAESLFLPRTDYSFHKFHYLTFVPS
AEDFYDCRVEHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGFIVGTVLIIKSLRSGHDPRAQGTL
>gi|532164639|emb|CDG23819.1| MHC class II antigen, partial [Macaca mulatta]
VCPEDRMFQTRAVILRALSLAFLLSLRGAGAIKADHVSTYASFVQTHRPTGEFMFEFDEDEQFYVDLDKKETVWHLEEFG
RAFSFEAQGGLANIAALNHNLNILIQRSNHTKAANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGEPVT
EGVAESLFLPRTDYRLHKFHYLTFVPSAEDFYDCRVEHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIVG
TVLIIKSLRSGRDPRAQGPL
>gi|109452208|dbj|BAE96548.1| major histocompatibility complex class II [Macaca mulatta]
VCPEDRMFQTRAVVLRALSLAFLLSLRGAGAIKADHVSTYASFVQTHRPTGEFMFEFDEDEQFYVDLDKKETVWHLEEFG
RAFSFEAQGGLANIAALNHNLNILIQRSNHTKAANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGEPVT
EGVAESLFLPRTDYRLHKFHYLTFVPSAEDFYDCRVEHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIVG
TVLIIKSLRSGRDPRAQGPL
>gi|549084811|emb|CDG57903.1| MHC class II protein [Macaca nemestrina]
MRPEDRMFQTRAVILRTLSLAFLLSLGGAGAIKADHVSTYAMFVQTHRPTGEFMFEFDEDEQFYVDLDKKETVWHLEEFG
RAFSFEAQGGLANIAILNNNLNITIQRSNYTQATNDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGEPVT
EGVAESLFLPRTDYSFHKFHYLTFVPSAEDYYDCRVEHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIVG
TVLIIKSLRSGRDPRAQGPL
>gi|549084819|emb|CDG57907.1| MHC class II protein, partial [Macaca nemestrina] >gi|554505451|emb|CDH93754.1| MHC class II antigen, partial [Macaca mulatta]
VCPEDRMFQTRAVILRALSLAFLLSLRGAGAIKADHVSTYASFVQTHRPTGEYMFEFDEDEQFYVDLDKKETVWHLEEFG
RAFSFEAQGGLANIAALNHNLNILIQRSNHTKAANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGEPVT
EGVAESLFLPRTDYRLHKFHYLTFVPSAEDFYDCRVEHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIVG
TVLIIKSLRSGRDPRAQGPL
>gi|600971543|emb|CDO19486.1| MHC class II antigen, partial [Macaca mulatta]
VCPEDRMFQTRAVILRALSLAFLLSLRGAGAIKADHVSTYAMFVQTHRPTGEFMFEFDEDEQFYVDLDKKETVWHLEEFG
RAFSFEAQGGLANIAALNHNLNILIQRSNHTKAANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGEPVT
EGVAESLFLPRTDYRLHKFHYLTFVPSAEDFYDCRVEHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIVG
TVLIIKSLRSGRDPRAQGPL
>gi|338176955|gb|AEI83876.1| MHC class II antigen [Macaca fascicularis] >gi|523704003|emb|CDF66300.1| MHC class II antigen [Macaca fascicularis] >gi|532164631|emb|CDG23815.1| MHC class II antigen [Macaca mulatta]
MRPEDRMFQTRAVILRTLSLAFLLSLRGAGAIKADHVSTYALFVQTHRPTGEFMFEFDEDEQFYVDLDKKETVWHLEEFG
RAFSFEAQGGLANIAILNNNLNITIQRSNYTQAANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGEPVT
EGVAESLFLPRTDYSFHKFHYLTFVPSAEDYYDCRVEHWGLDQPLLKHWEAQEPIQIPETTETVLCALGLVLGLVGIIVG
TVLIIKSLRSGRDPRAQGPL
>gi|635147130|ref|XP_008017365.1| PREDICTED: HLA class II histocompatibility antigen, DP alpha 1 chain [Chlorocebus sabaeus]
MRPEDRMFQSRAVILRALSLAFLLSLRGAGAIKADHVSTYAMFVQTHRPTGEFMFEFDEDEMFYVDLDKKETVWHLEEFG
RAFSFEAQGGLANIAALNHNLNIIIQRSNHSQAANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGQPVT
EGVAESLFLPRTGSGFHKFHYLTFVPSAEDYYDCRVEHWGLDQPLLKHWEAQEPIQIPETTETVLCALGLVLGLVGIIVG
TILIIKSLRSGRDPRAQGPL
>gi|337272804|gb|AEI70162.1| MHC class II antigen [Macaca fascicularis]
MRPEDRMFQTRAVILRTLSLAFLLSLGGAGAIKADHVSTYAMFVQTHRPTGEFMFEFDEDEQFYVDLDKKETVWHLEEFG
RAFSFEAQGGLANIAILNNNLNITIQRSNYTQAANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGEPVT
EGVAESLFLPRTDYSFHKFHYLTFVPSAEDYYDCRVEHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIVG
TVLIIKSLRSGRDPRAQGPL
>gi|296197851|ref|XP_002746467.1| PREDICTED: HLA class II histocompatibility antigen, DP alpha 1 chain [Callithrix jacchus]
MHPEDRVFQIRAVILRAFSLAFLLSLRGAGAIKADHVSTFVMFVQTQRPTGEFVFEFDKDEIFHVDLDKKETVWRLEEFG
RAYSFEVQGGLANIAALNYNLNIMIQRSNHTQATNDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGQPVT
EGVAESVFLPGTDGSFHKFHYLTFVPSAEDVYDCRVEHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIMG
TILIIKSLRSGRDPRAQGPL
>gi|343094711|emb|CCC54323.1| MHC class II antigen [Macaca fascicularis]
MRPEDRMFQTRAVILRTLSLAFLLSLRGAGAIKADHVSTYAAFVQTHRPTGEYMFEFDEDEQFYVDLDKKETVWHLEEFG
RAFSFEAQGGLANIAILNNNLNITIQRSNYTQAANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGQPAT
EGVAESLFLPRTDYSFHKFHYLTFVPSAEDYYDCRVEHWGLDQPLLKHWEAQEPIQMPETRETVLCALGLVLGLVGIIVG
TVLIIKSLRSGRDPRAQGPL
>gi|629265946|dbj|BAO74092.1| major histocompatibility complex class II antigen DPA [Macaca fascicularis]
MFQTRAVILRTLSLAFLLSLRGAGAIKADHVLTFTTFVQTHRPTGEYMYELDEDEIFFVDLDKKETIWHLEEFGRAFSFE
AQGGLANIAISNNNLNVTIQLSNHTQATNDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGQPVTEGVTES
LFLPRTDYSFHKFHYLTFVPSAEDYYDCRVEHWGLDQPLLKHWEPQEPIQMPETTETVLCALGLVLGLVGIIVGTVLIIK
SLRSGRDPRAQGPL
>gi|549084827|emb|CDG57911.1| MHC class II protein [Macaca nemestrina] >gi|671708623|gb|AII81828.1| MHC class II antigen [Macaca nemestrina]
MCPEDRMFQTRAVILRTLSLAFLLSLRGAGAIKADHVSTYAMFVQTHRPTGEFMFEFDEDEQFYVDLDKKETVWHLEEFG
RAFSFEAQGGLANIAILNNNLNITIQRSNYTQAANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGEPVT
EGVAESLFLPRTDYSFHKFHYLTFVPSAEDYYDCRVEHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIVG
TVLIIKSLRSGRDPRAQGPL
>gi|124244247|gb|ABM92289.1| MHC class II antigen [Macaca mulatta]
MCPEDRMFQTRAVILRTLSLAFLLSLRGAGAIKADHVSTYALFVQTHRPTGEFMFEFDEDEQFYVDLDKKETVWHLEEFG
RAFSFEAQGGLANIAILNNNLNITIQRSNYTQAANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGEPVT
EGVAESLFLPRTDYSFHKFHYLTFVPSAEDYYDCRVEHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIVG
TVLIIKSLRSGRDPRAQGPL
>gi|671708633|gb|AII81833.1| MHC class II antigen [Macaca nemestrina]
MFQTRAVILRALSLAFLLSLRGAGAIKADHVSTYASFVQTHRPTGEYMFEFDEDEMFYVDLDKKETVWHLEEFGRAFSFE
AQGGLANIAALNHNLNTLIQRSNHTQAANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGEPVTEGVAES
LFLPRTDYRLHKFHYLTFVPSAEDFYDCRVEHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIVGTVLIIK
SLRSGRDPRAQGPL
>gi|355748456|gb|EHH52939.1| hypothetical protein EGM_13480 [Macaca fascicularis]
MRPEDRMFQTRAVILRTLSLAFLLSLRGAGAIKADHVSTYALFVQTHRPTGEFMFEFDEDEQFYVDLDKKETVWHLEEFG
RAFSFEAQGGLANIAILNNNLNITIQRSNYTQAANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGQPAT
EGVAESLFLPRTDYSFHKFHYLTFVPSAEDYYDCRVEHWGLDQPLLKHWEAQEPIQIPETTETVLCALGLVLGLVGIIVG
TVLIIKSLRSGRDPRAQGPL
>gi|187264161|emb|CAQ15935.1| MHC class II DP alpha chain [Macaca fascicularis] >gi|549084807|emb|CDG57901.1| MHC class II protein [Macaca nemestrina] >gi|671708617|gb|AII81825.1| MHC class II antigen [Macaca nemestrina]
MRPEDRMFQTRAVILRTLSLAFLLSLRGAGAIKADHVSTYAMFVQTHRPTGEYMFEFDEDEQFYVDLDKKETVWHLEEFG
RAFSFEAQGGLANIAILNNNLNITIRRSNYTQAANDPPEVTMFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGQPVT
EGVAESLFLPRTDYSFHKFHYLTFVPSAEDYYDCRVEHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIVG
TVLIIKSLRSGRDPRAQGPL
>gi|549084809|emb|CDG57902.1| MHC class II protein [Macaca nemestrina]
MCPEDRMFQTRAVILRTLSLAFLLSLRGAGAIKADHVSTYAAFVQTHRPTGEYMFEFDEDEQFYVDLDKKETVWHLEEFG
RAFSFEAQGGLANIAILNNNLNITIQRSNYTQAANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGQPAT
EGVAESLFLPRTDYSFHKFHYLTFVPSAEDYYDCRVEHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIVG
TVLIIKSLRSGRDPRAQGPL
>gi|671708621|gb|AII81827.1| MHC class II antigen [Macaca nemestrina]
MRPEDRMFQTRAVILRTLSLAFLLSLRGAGAIKADHVSTYAMFVQTHRPTGEYMFEFDEDEQFYVDLDKKETVWHLEEFG
RAFSFEAQGGLANIAILNNNLNITIRRSNYTQAANDPPEVTMFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGQPIT
EGVAESLFLPRTDYSFHKFHYLTFVPSAEDYYDCRVEHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIVG
TVLIIKSLRSGRDPRAQGPL
>gi|124244253|gb|ABM92292.1| MHC class II antigen [Macaca mulatta]
MCPEDRMFQTRAVILRTLSLAFLLSLRGAGAIKADHVSIYAMFVQTHRPTGEFMFEFDEDEQFYVDLDKKETVWHLEEFG
RAFSFEAQGGLANIAILNNNLNITIQRSNYTQAANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGEPVT
EGVAESLFLPRTDYSFHKFHYLTFVPSAEDYYDCRVEHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIVG
TVLIIKSLRSGRDPRAQGPL
>gi|549084823|emb|CDG57909.1| MHC class II protein [Macaca nemestrina]
MRPEDRMFQTRAVILRTLSLAFLLSLRGAGAIKADHVSTYAMFVQTHRPTGEYMFEFDEDEQFYVDLDKKETVWHLEEFG
RAFSFEAQGGLANIAILNNNLNITIRRSNYTQAANDPPEVTMFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGQPVT
KGVAESLFLPRTDYSFHKFHYLTFVPSAEDYYDCRVEHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIVG
TVLIIKSLRSGRDPRAQGPL
>gi|187264159|emb|CAQ15934.1| MHC class II DP alpha chain [Macaca fascicularis]
MRPEDRMFQTRAVILRTLSLAFLLSLRGAGAIKADHVSTYAMFVQTHRPTGEYMFEFDEDEQFYVDLDKKETVWHLEEFG
RAFSFEAQGGLANIAILNNNLNITIRRSNYTQAANDPPEVTMFPKEPVELGQPNTLICHIDKFFPPVLNATWLCNGQPVT
EGVAESLFLPRTDYSFHKFHYLTFVPSAEDYYDCRVEHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIVG
TVLIIKSLRSGRDPRAQGPL
>gi|338176951|gb|AEI83874.1| MHC class II antigen [Macaca fascicularis]
MFQTRAVILRALSLAFLLSLRGAGAIKADHVSTYASFVQTHRPTGEYMFEFDEDEMFYVDLDKKETVWHLEEFGRAFSFE
AQGGLANIAALNHNLNTLIQRSNHTQAANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGEPVTEGVAES
LFLPRTDYRLHKFHYLTFVPSAEDFYDCRVEHWGLDQPLLKHWEAQEPIQMPETRETVLCALGLVLGLVGIIVGTVLIIK
SLRSGRDPRAQGPL
>gi|523704017|emb|CDF66307.1| MHC class II antigen [Macaca mulatta] >gi|549084829|emb|CDG57912.1| MHC class II protein [Macaca fascicularis]
MRPEGRVFQTRTVILRAFSFAFLLSLRGAGAIKADHVSTYAMFVQTHNPTGEYMFEFDEDEQFYVDLDKKETVWHLEEFA
QAFSFEAQGGLDDIATLKYNLNIMIQRSNHTQAANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGEPVT
EGVAESLFLPGTDFSFHKFHYLTFVPSVEDVYDCRVEHWGLDQPFLKHWEAQEPIQIPETTETVLCALGLVLGLVGIIVG
TILILKAMRSGRDPRAQGPL
>gi|125995305|dbj|BAF47199.1| MHC class II DPA [Macaca mulatta] >gi|532164623|emb|CDG23811.1| MHC class II antigen [Macaca mulatta]
MCPEDRMFQTKAVILRTLSLAFLLSLRGAGAIKADHVSTYAMFVQTHRPTGEYMFEFDEDEMFYVDLDKKETIWHLEEFG
RAFSFEAQGGLANIAILNNNLNITIRRSNYTQAANDPPEVTMFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGQPVT
EGVAESLFLPRTDYSFHKFHYLTFVPSAEDYYDCRVEHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIVG
TVLIIKSLRSGRDPRAQGPL
>gi|337272802|gb|AEI70161.1| MHC class II antigen [Macaca fascicularis] >gi|339333291|emb|CBX60101.1| MHC class II antigen [Macaca fascicularis]
MCPEDRMFQTRAVILRTLSLAFLLSLRGAGAIKADHVSTYATFVQTHRPTGEFMFEFDEDEQFYVDLDKKETVWHLEEFG
RAFSFEAQGGLANIAILNNNLNITIRRSNYTQAANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGQPAT
EGVAESLFLPRTDYSFHKFHYLTFVPSAEDYYDCRVEHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIVG
TVLIIKSLRSGRDPRAQGPL
>gi|532164619|emb|CDG23809.1| MHC class II antigen [Macaca mulatta]
MRPEDRMFQTRAVILRTLSLALLLSLGGAGAIKADHVSTYAMFVQTHRPTGEFMFEFDEDEQFYVDLDKKETVWHLEEFG
RAFSFEAQGGLANIAILNHNLNITIQRSNYTQAANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGEPVT
EGVAESLFLPRTDYSFHKFHYLTFVPSAEDYYDCRVEHWGLDQPLLKHWEAQEPIQIPETTETVLCALGLVLGLVGIIVG
TVLIIKSLRSGRDPRAQGPL
>gi|125995302|dbj|BAF47198.1| MHC class II DPA [Macaca mulatta] >gi|532164629|emb|CDG23814.1| MHC class II antigen [Macaca mulatta]
MHPEDRMFQTRAVILRTLSLALLLSLGGAGAIKADHVSTYVVFTQTHRPTGEFMFEFDEDEQFYVDLDKKETVWHLEEFG
RAFSFEAQGGLANIAISNNNLNTMIQRSNYTQAANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGEPVT
EGVAESLFLPRTDYSFHKFHYLTFVPSAEDYYDCRVEHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIVG
TVLIIKSLRSGRDPRAQGPL
>gi|337272808|gb|AEI70164.1| MHC class II antigen [Macaca fascicularis]
MRPEDRMFQTRAVILRTLSLALLLSLGGAGAIKADHVSTYALFVQTHRPTGEFMFEFDEDEQFYVDLDKKETVWHLEEFG
RAFSFEAQGGLANIAILNHNLNITIQRSNYTQAANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGEPVT
EGVAESLFLPRTDYSFHKFHYLTFVPSAEDYYDCRVEHWGLDQPLLKHWEAQEPIQIPETTETVLCALGLVLGLVGIIVG
TVLIIKSLRSGRDPRAQGPL
>gi|338176957|gb|AEI83877.1| MHC class II antigen [Macaca fascicularis]
MRPEDRMFETRAVILRTLSLALLLSLGGAGAIKADHVSTYALFVQTHRPTGEFMFEFDEDEQFYVDLDKKETVWHLEEFG
RAFSFEAQGGLANIAILNHNLNITIQRSNYTQAANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGEPVT
EGVAESLFLPRTDYSFHKFHYLTFVPSAEDYYDCRVEHWGLDQPLLKHWEAQEPIQIPETTETVLCALGLVLGLVGIIVG
TVLIIKSLRSGRDPRAQGPL
>gi|124244243|gb|ABM92287.1| MHC class II antigen [Macaca mulatta]
MDINYRPHNVCPEDRMFQTRAIVLRTLSLAFLLSLRGAGAIKADHVSTYAAFVQTHRPTGEFMFEFDEDEQFYVDLDKKE
TVWHLEEFGRAFSFEAQGGLANIAILNNNLNITIQRSNYTQAANDPPEVTVFPKEPVALGQPNTLICHIDKFFPPVLNVT
WLCNGEPVTEGVAESLFLPRTDYSFHKFHYLTFVPSAEDYYDCRVEHWGLDQPLLKHWEAQEPIQIPETTETVLCALGLV
LGLVGIIVGTVLIIKSLRSGRDPRAQGPL
>gi|125742997|gb|ABN54701.1| MHC class II antigen [Macaca mulatta]
MDINYRPHNVCPEDRMFQTRAIVLRTLSLAFLLSLRGAGAIKADHVSTYAAFVQTHRPTGEFMFEFDEDEQFYVDLDKKE
TVWHLEEFGRAFSFEAQGGLANIAILNNNLNITIQRSNYTQAANDPPEVTVFPKEPVELGQPNILICHIDKFFPPVLNVT
WLCNGQPATEGVAESLFLPRTDYSFHKFHYLTFVPSAEDYYDCRVEHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLV
LGLVGIIVGTVLIIKSLRSGRDPRAQGPL
>gi|402866623|ref|XP_003897478.1| PREDICTED: HLA class II histocompatibility antigen, DP alpha 1 chain-like isoform 1 [Papio anubis] >gi|402866625|ref|XP_003897479.1| PREDICTED: HLA class II histocompatibility antigen, DP alpha 1 chain-like isoform 2 [Papio anubis]
MRPEDRMFQTRAVILRTLSLALLLSLGGAGAIKADHVSTYATFVQTHRPTGEFMFEFDEDEQFYVDLDKKETVWHLEEFG
RAFSFEAQGGLANIAILNHNLNITIQRSNYTQAANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGEPVT
EGVAESLFLPRTDYSFHKFHYLTFVPSAEDYYDCRVEHWGLDQPLLKHWEAQEPIQIPETTETVFCALGLVLGLVGIIVG
TILIIKSLRSGRDPRAQGPL
>gi|337272806|gb|AEI70163.1| MHC class II antigen [Macaca fascicularis] >gi|339333283|emb|CBX60097.1| MHC class II antigen [Macaca fascicularis]
MCPEDRMFQTRAVILRTLSLAFLLSLRGAGAIKADHVSTYAMFVQTHRPTGEYMFEFDEDEQFYVDLDKKETVWHLEEFG
RAFSFEAQGGLANIAILNNNLNITIRRSNYTQAANDPPEVTMFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGQPVT
EGVAESLFLPRTDYSFHKFHYLTFVPSAEDYYDCRVEHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIMG
TVLIIKSLRSGRDPRAQGPL
>gi|125488982|gb|ABN42652.1| MHC class II antigen DP alpha chain [Macaca fascicularis] >gi|532164645|emb|CDG23822.1| MHC class II antigen [Macaca mulatta]
MCPEDRMFQTRAVILRTLSLAFLLSLRGAGAIKADHVSTYALFVQTHRPTGEFMFEFDEDEMFYVDLDKKETVWHLEEFG
RAFSFEAQGGLANIAALNNNLNTLIQLSNHTPAANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGEPVT
EGVAESLFLPRTDYRLHKFHYLTFVPSAEDFYDCRVEHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIVG
SILILKAMRSGRDPRAQGPL
>gi|532164633|emb|CDG23816.1| MHC class II antigen [Macaca mulatta]
MHPEDRMFQTRAVILRTLSLALLLSLGGAGAIKADHVSTYALFVQTHRPTGEFMFEFDEDEQFYVDLDKKETVWHLEEFG
RAFSFEAQGGLANIAILNHNLNITIQRSNYTQAANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGEPVT
EGVAESLFLPRTDYSFHKFHYLTFVPSAEDYYDCRVEHWGLDQPLLKHWEAQEPIQIPETTETVLCALGLVLGLVGIIVG
TVLIIKSLRSGRDPRAQGPL
>gi|296537625|gb|ADH29928.1| MHC class II antigen [Macaca mulatta]
MDINYRPHNVCPEDRMFQTRAIVLRTLSLAFLLSLRGAGAIKADHVSTYALFVQTHRPTGEFMFEFDEDEQFYVDLDKKE
TVWHLEEFGRAFSFEAQGGLANIAILNNNLNITIQRSNYTQAANDPPEVTVFPKEPVALGQPNTLICHIDKFFPPVLNVT
WLCNGEPVTEGVAESLFLPRTDYSFHKFHYLTFVPSAEDYYDCRVEHWGLDQPLLKHWEAQEPIQIPETTETVLCALGLV
LGLVGIIVGTVLIIKSLRSGRDPRAQGPL
>gi|355569761|gb|EHH25502.1| hypothetical protein EGK_21321 [Macaca mulatta]
MRPEDRMFQTRAVILRTLSLALLLSLGGAGAIKADHVSTYAMFVQTHRPTGEFMFEFDEDEQFYVDLDKKETVWHLEEFG
RAFSFEAQGGLANIAILNHNLNITIQRSNYTQAANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGEPVT
EGVAESLFLPRTDYRLHKFHYLTFVPSAEDYYDCRVEHWGLDQPLLKHWEAQEPIQIPETTETVLCALGLVLGLVGIIVG
TVLIIKSLRSGRDPRAQGPL
>gi|395728713|ref|XP_002809180.2| PREDICTED: HLA class II histocompatibility antigen, DP alpha 1 chain-like [Pongo abelii]
MENICHQKKVLEAHSFRVSSASTRPQFLITVSVLTVIDYRPHNMRPEDRMFQTRGVILRALSLAVLLSLRGAGAIKADHV
STFAMFIQTHRPTGEYMFEFDEDEMFHVDLDKKETVWHLEEFGRAFSLEAQGGLANIAALNDHLNAMIQHSNHTQAANDP
PEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGEPVTEGVAESLFLPRTGYSFHKFHYLTFVPSAEDVYDCRVE
HWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIMGTILILKAMRSSRDPRAQGTL
>gi|338176959|gb|AEI83878.1| MHC class II antigen [Macaca fascicularis]
MRPEDRMFETRAVILRTLSLALLLSLGGAGAIKADHVSTYALFVQTHRPTGEYMFEFDEDEMFYVDLDKKETVWHLEEFG
RAFSFEAQGGLDDIATLKYNLNITIQRSNHTQAANDPPEVMVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGEPVT
EGVAESLFLPRTDYSFHKFHYLTFVPSAEDFYDCRVEHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIVG
TILIIKSLRSGRDPRAQGPL
>gi|339333279|emb|CBX60095.1| MHC class II antigen [Macaca fascicularis]
MFQTRAIVLRTLSLAFLLSLRGAGAIKADHVSTYAAFVQTHRPTGEFMFEFDEDEQFYVDLDKKETVWHLEEFGRAFSFE
AQGGLANIAILNNNLNITIQRSNYTQAANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGQPATEGVAES
LFLPRTDYSFHKFHYLTFVPSAEDYYDCRVEHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIVGTVLIIK
SLRSGRDPRAQGPL
>gi|338176947|gb|AEI83872.1| MHC class II antigen [Macaca fascicularis]
MFQTRAIVLRTLSLAFLLSLRGAGAIKADHVSTYAAFVQTHRPTGEYMFEFDEDEQFYVDLDKKETVWHLEEFGRAFSFE
AQGGLANIAILNNNLNITIQRSNYTQAANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGQPATEGVAES
LFLPRTDYSFHKFHYLTFVPSAEDYYDCRVEHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIVGTVLIIK
SLRSGRDPRAQGPL
>gi|549084825|emb|CDG57910.1| MHC class II protein, partial [Macaca nemestrina]
VCPEDRMFQTTAVILRTLSLAFLLSLRGAGAIKADHVSTYALFVQTHRPTGEFMFEFDEDEQFYVDLDKKETVWHLEEFG
RAFSFEAQGGLANIAALNNNLNTLIQLSNHTPAANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGEPVT
EGVAESLFLPRTDYRLHKFHYLTFVPSAEDFYDCRVEHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIVG
SILILKAMRSGRDPRAQGPL
>gi|403261538|ref|XP_003923175.1| PREDICTED: HLA class II histocompatibility antigen, DP alpha 1 chain-like isoform 1 [Saimiri boliviensis boliviensis] >gi|403261540|ref|XP_003923176.1| PREDICTED: HLA class II histocompatibility antigen, DP alpha 1 chain-like isoform 2 [Saimiri boliviensis boliviensis]
MRPEDRIFQTRAVILRALSLAFLLSLRGAGAIKADHVSTFAMFVQMQRPTGEFMFEFDEDEMFYVDLDKKETVWHLEEFG
RAFSFEFQNGLSNIAALNHNLNIMIQRSNHTQATNDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGQPVT
EGVAESLFLSRTDGSFHKFHYLIFVPSAEDVYDCRVEHWGLDQPLLKHWEAQEPIQMPETTETVLCTLGLVLGLVGIIVG
TILIIKSLRSGRDPRAQGPL
>gi|532164647|emb|CDG23823.1| MHC class II antigen [Macaca mulatta]
MHPEDRMFQTRAVILRTLSLALLLSLGGAGAIKADHVSTYALFVQTHRPTGEYMFEFDEDEMFYVDLDKKETVWHLEEFG
RAFSFEAQGGLDDIATLKYNLNITIQRSNHTQAANDPPEVMVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGEPVT
EGVAESLFLPRTDYSFHKFHYLTFVPSAEDFYDCRVEHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIVG
TILIIKSLRSGRDPRAQGPL
>gi|125488978|gb|ABN42650.1| MHC class II antigen DP alpha chain [Macaca fascicularis] >gi|351720392|emb|CBX60102.2| MHC class II antigen [Macaca fascicularis]
MRPEDRMFETRAVILRTLSLALLLSLGGAGAIKADHVSTYALFVQTHRPTGEYMFEFDEDEQFYVDLDKKETVWHLEEFG
RAFSFEAQGGLDDIATLKYNLNITIQRSNHTQAANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGEPVT
EGVAESLFLPRTDYSFHKFHYLTFVPSAEDFYDCRVEHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIVG
TVLIIKSLHSGRDPRAQGPL
>gi|635095875|ref|XP_007971168.1| PREDICTED: HLA class II histocompatibility antigen, DP alpha 1 chain [Chlorocebus sabaeus]
MRPEDRMFQSRAVILRALSLAFLLSLRGAGAIKADHVSTFAMFVQTHRPTGEFMFEFDEDEMFYVDLDKKETVWHLEEFG
QAIFTDAQGGLANIAALNHNLNIIIQRSNHSQAANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGEPVT
EGVAESLFLPRTGSGFHKFHYLTFVPSAEDVYDCRVEHWGLDQPLLKHWEAQEPIQIPETTETVLCALGLVLGLVGIIVG
SILILKAMRSGRDPRAQGPL
>gi|114606824|ref|XP_518390.2| PREDICTED: HLA class II histocompatibility antigen, DP alpha 1 chain isoform 3 [Pan troglodytes] >gi|410040596|ref|XP_003950846.1| PREDICTED: HLA class II histocompatibility antigen, DP alpha 1 chain isoform 1 [Pan troglodytes] >gi|410040599|ref|XP_003950847.1| PREDICTED: HLA class II histocompatibility antigen, DP alpha 1 chain isoform 2 [Pan troglodytes]
MRPEDRMFHIRAVIFRALSLAFLLSLRGAGAIKADHVSTYATFVQTHRPTGEFMFEFDEDEMFYVDLDKKETVWHLEEFG
RAFSFEAQGGLANIAILNNNLNILIQRSNHTQAANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGEPVT
EGVAESLFLPRTDYSFHKFHYLTFVPSAEDFYDCKVEHWGLDQPLLKHWEAQEPIQMPETRETVLCALGLVLGLVGIIVG
TILIIKSLRSGRDPRAQGPL
>gi|629265944|dbj|BAO74091.1| major histocompatibility complex class II antigen DPA [Macaca fascicularis]
MFQTRAVILRTLSLAFLLSLRGAGAIKADHVSTYAMFVQTHRPTGEYMFEFDEDEQFYVDLDKKETVWHLEEFGRAFSFE
AQGGLANIAILNNNLNITIRRSNYTQAANDPPEVTMFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGQPVTEGVAES
LFLPRTDYSFHKFHYLTFVPSAEDYYDCRVEHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIVGTVLIIK
SLRSGRDPRAQGPL
>gi|337272814|gb|AEI70167.1| MHC class II antigen [Macaca fascicularis] >gi|629265912|dbj|BAO74075.1| MHC class II antigen alpha chain [Macaca fascicularis] >gi|671708625|gb|AII81829.1| MHC class II antigen [Macaca nemestrina] >gi|671708627|gb|AII81830.1| MHC class II antigen [Macaca nemestrina]
MFQTRAIVLRTLSLAFLLSLRGAGAIKADHVSTYATFVQTHRPTGEFMFEFDEDEQFYVDLDKKETVWHLEEFGRAFSFE
AQGGLANIAILNNNLNITIRRSNYTQAANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGQPATEGVAES
LFLPRTDYSFHKFHYLTFVPSAEDYYDCRVEHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIVGTVLIIK
SLRSGRDPRAQGPL
>gi|337272818|gb|AEI70169.1| MHC class II antigen [Macaca fascicularis]
MHPEDRMFETRAVILRTLSLALLLSLGGAGAIKADHVSTYALFVQTHRPTGEYMFEFDEDEQFYVDLDKKETVWHLEEFG
RAFSFEAQGGLDDIATLKYNLNITIQRSNHTQAANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGEPVT
EGVAESLFLPRTDYSFHKFHYLTFVPSAEDFYDCRVEHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIVG
TVLIIKSLHSGRDPRAQGPL
>gi|339333277|emb|CBX60094.1| MHC class II antigen [Macaca fascicularis]
MFQTRAIVLRTLSLAFLLSLRGAGAIKADHVSTYATFVQTHRPTGEFMFEFDEDEQFYVDLDKKETVWHLEEFGRAFSFE
AQGGLANIAILNNNLNITIRRSNYTQAANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGQPATEGVAES
LFLPRTDYSFHKFHYLTFVPSAEDYYDCRVEHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIMGTVLIIK
SLRSGRDPRAQGPL
>gi|441594250|ref|XP_004087152.1| PREDICTED: HLA class II histocompatibility antigen, DP alpha 1 chain-like isoform 3 [Nomascus leucogenys]
MCPEDRMFHIRAMMLRALSLAFLLSLRGAGAIKADHVSTYAAFVQTHRPTGEFMFEFDEDEQFYVDLDKKETVWHLEEFG
RAFSFEAQGGLANIAILNNNLNIMIQRSNHTQAASDPPEVTMFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGEPVT
EGVAESLFLPRTDYSFHKFHYLTFVPSAEDFYDCRVEHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIVG
TILILKAIRSGRDPRAQGPL
>gi|441594247|ref|XP_004087151.1| PREDICTED: HLA class II histocompatibility antigen, DP alpha 1 chain-like isoform 2 [Nomascus leucogenys]
MRSIPAVPGTVINYRPYNMCPEDRMFHIRAMMLRALSLAFLLSLRGAGAIKADHVSTYAAFVQTHRPTGEFMFEFDEDEQ
FYVDLDKKETVWHLEEFGRAFSFEAQGGLANIAILNNNLNIMIQRSNHTQAASDPPEVTMFPKEPVELGQPNTLICHIDK
FFPPVLNVTWLCNGEPVTEGVAESLFLPRTDYSFHKFHYLTFVPSAEDFYDCRVEHWGLDQPLLKHWEAQEPIQMPETTE
TVLCALGLVLGLVGIIVGTILILKAIRSGRDPRAQGPL
>gi|523704005|emb|CDF66301.1| MHC class II antigen, partial [Macaca fascicularis]
AVILRTLSLAFLLSLRGAGAIKADHVSTYAAFVQTHRPTGEYMFEFDEDEQFYVDLDKKETVWHLEEFGRAFSFEAQGGL
ANIAILNNNLNITIQRSNYTQAANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGQPATEGVAESLFLPR
TDYSFHKFHYLTFVPSAEDYYDCRVEHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIVGTVLIIKSLRSG
RDPRAQGPL
>gi|441594244|ref|XP_003272212.2| PREDICTED: HLA class II histocompatibility antigen, DP alpha 1 chain-like isoform 1 [Nomascus leucogenys]
MRSIPAVPGTVLEAHSFRVSSASTQPQFLFTVPVLTVINYRPYNMCPEDRMFHIRAMMLRALSLAFLLSLRGAGAIKADH
VSTYAAFVQTHRPTGEFMFEFDEDEQFYVDLDKKETVWHLEEFGRAFSFEAQGGLANIAILNNNLNIMIQRSNHTQAASD
PPEVTMFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGEPVTEGVAESLFLPRTDYSFHKFHYLTFVPSAEDFYDCRV
EHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIVGTILILKAIRSGRDPRAQGPL
>gi|671708639|gb|AII81836.1| MHC class II antigen [Macaca nemestrina]
MFQTTAVILRTLSLAFLLSLRGAGAIKADHVSTYALFVQTHRPTGEFMFEFDEDEQFYVDLDKKETVWHLEEFGRAFSFE
AQGGLANIAALNNNLNTLIQLSNHTPAANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGEPVTEGVAES
LFLPRTDYRLHKFHYLTFVPSAEDFYDCRVEHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIVGSILILK
AMRSGRDPRAQGPL
>gi|338176943|gb|AEI83870.1| MHC class II antigen [Macaca fascicularis]
MCPEGRMFQTRAVILRALSLAFLLSLRGAGAIKADHVSTYVMFVQTHRPTGEFMFEFDEDEMFYVDLDKKETVWHLEEFG
RAFFFEAQRVLSHIVILNDSLNIMIQRSNHTPAANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGQPVT
EGVAESIFLPRTGYNFHKFHYLTFVPSAEDVYDCRVEHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIVG
SILILKAMRSGRDPRAQGPL
>gi|554505453|emb|CDH93755.1| MHC class II antigen, partial [Macaca mulatta]
AVILRTLSLAFLLSLRGAGAIKADHVSTYAMFVQTHRPTGEFMFEFDEDEMFYVDLDKKETVWHLEEFGRAFSFEAQGGL
ANIAALNNNLNTLIQLSNHTPAANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGEPVTEGVAESLFLPR
TDYRLHKFHYLTFVPSAEDYYDCRVEHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIVGSILILKAMRSG
RDPRAQGPL
>gi|220681926|gb|ACL80121.1| MHC class II antigen [Macaca mulatta]
MFQTRAVILRTLSLAFLLSLRGAGAIKADHVLTFAAFVQTHRPTGEYMYELDEDEIFFVDLDKKETVWHLEEFGRAFSFE
AQGGLANIAILNNNLNVTIQLSNHTQATNDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGQPVTEGVTES
LFLPRTDYSFHKFHYLTFVPSAEDYYDCRVEHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIVGTVLIIK
SLRSGRDLRAEGPL
>gi|109452206|dbj|BAE96547.1| major histocompatibility complex class II [Macaca mulatta]
MCPEGRMFQTRAVILRALSLAFLLSLRGAGAIKADHVSTYVMFVQTHRPTGEFMFEFDEDEMFYVDLDKKETVWHLEEFG
RAFFFEAQRVLSHIVILNDSLNIMIQRSNHTPAANDPPEVAVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGQPVT
EGVAESIFLPRTGYNFHKFHYLTFVPSAEDVYDCRVEHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIVG
SILILKAMRSGRDPRAQGPL
>gi|549084817|emb|CDG57906.1| MHC class II protein, partial [Macaca nemestrina]
VCPEDRMFQTRAVILRALSLAFLLSLRGAGAIKADHVSTYASFVQTHRPTGEYMFEFDEDEMFYVDLDKKETVWHLEEFG
RAFSFEAQGGLANIAALNNNLNTLIQLSNHTPAANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGEPVT
EGVAESLFLPRTDYRLHKFHYLTFVPSAEDFYDCRVEHWGLDQPLLKHWEAQEPIQMPETRETVLCALGLVLGLVGIIVG
TVLIIKSLQSGRDPRAQGPL
>gi|125488984|gb|ABN42653.1| MHC class II antigen DP alpha chain [Macaca fascicularis]
HNVCPEDRMFQTRAVILRALSLAFLLSLRGAGAIKADHVSTYASFVQTHRPTGEYMFEFDEDEMFYVDLDKKETVWHLEE
FGRAFSFEAQGGLANIAALNNNLNTLIQLSNHTPAANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGEP
VTEGVAESLFLPRTDYRLHKFHYLTFVPSAEDFYDCRVEHWGLDQPLLKHWEAQEPIQMPETRETVLCALGLVLGLVGII
VGTVLIIKSLQSGRDPRAQGPL
>gi|671708637|gb|AII81835.1| MHC class II antigen [Macaca nemestrina]
MCPEGRMFQTRAVILRALSLAFLLSLRGAGAIKADHVSTYVMFAQTHRPTGEFMFEFDEDEMFYVDLDKKETVWHLEEFG
RAFFFEAQRVLSHIVILNDSLNIMIQRSNHTPAANDPPEVAVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGQPVT
EGVAESIFLPRTGYNFHKFHYLTFVPSAEDVYDCRVEHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIVG
SILILKAMRSGRDPRAQGPL
>gi|523704019|emb|CDF66308.1| MHC class II antigen [Macaca mulatta]
MRPEDRMFQTRAVILRTLSLALLLSLGGAGAIKADHVSTYATFVQTHRPTGEFMFEFDEDEQFYVDLDKKETVWHLEEFG
RAFSFEAQGGLANIAILNNNLNITIQRSNYTQAANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGEPVT
EGVAESLFLPRTDYSFHKFHYLTFVPSAEDYYDCRVEHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIVG
TVLIIKSLRSGRDPRAQGPL
>gi|197365575|gb|ACH70282.1| MHC class II antigen [Macaca mulatta] >gi|201066966|gb|ACH92671.1| MHC class II antigen [Macaca mulatta] >gi|554505441|emb|CDH93749.1| MHC class II antigen [Macaca mulatta]
MRPEDRMFQTRAVILRTLSLALLLSLGGAGAIKADHVSTYAMFVQTHRPTGEFMFEFDEDEQFYVDLDKKETVWHLEEFG
RAFSFEAQGGLANIAILNNNLNITIQRSNYTQAANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGEPVT
EGVAESLFLPRTDYSFHKFHYLTFVPSAEDYYDCRVEHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIVG
TVLIIKSLRSGRDPRAQGPL
>gi|125742999|gb|ABN54702.1| MHC class II antigen [Macaca mulatta]
MRPEDRMFQTRAVILRTLSLALLLSLGGAGAIKADHVSTYALFVQTHRPTGEFMFEFDEDEQFYVDLDKKETVWHLEEFG
RAFSFEAQGGLANIAILNNNLNITIQRSNYTQAANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGEPVT
EGVAESLFLPRTDYSFHKFHYLTFVPSAEDYYDCRVEHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIVG
TVLIIKSLRSGRDPRAQGPL
>gi|343094709|emb|CCC54322.1| MHC class II antigen [Macaca fascicularis]
MRPEDRMFQTRAVILRTLSLALLLSLGGAGAIKADHVSTYALFVQTHRPTGEFMFEFDEDEMFYVDLDKKETVWHLEEFG
RAFSFEAQGGLANIAILNNNLNITIRRSNYTQAANDPPEVTMFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGQPVT
EGVAESLFLPRTDYSFHKFHYLTFVPSAEDYYDCRVEHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIVG
TVLIIKSLRSGRDPRAQGPL
>gi|545686759|ref|NP_001270212.1| HLA class II histocompatibility antigen, DP alpha 1 chain-like precursor [Macaca fascicularis] >gi|523704013|emb|CDF66305.1| MHC class II antigen [Macaca fascicularis]
MRPEDRMFETRAVILRTLSLALLLSLGGAGAIKADHVSTYALFVQTHRPTGEFMFEFDEDEMFYVDLDKKETVWHLEEFG
RAFSFEAQGGLANIAILNNNLNITIRRSNYTQAANDPPEVTMFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGQPVT
EGVAESLFLPRTDYSFHKFHYLTFVPSAEDYYDCRVEHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIVG
TVLIIKSLRSGRDPRAQGPL
>gi|337272820|gb|AEI70170.1| MHC class II antigen [Macaca fascicularis] >gi|532164621|emb|CDG23810.1| MHC class II antigen [Macaca mulatta]
MRPEDRMFETRAVILRTLSLALLLSLGGAGAIKADHVSTYAMFVQTHRPTGEYMFEFDEDEMFYVDLDKKETVWHLEEFG
RAFSFEAQGGLANIAILNNNLNITIRRSNYTQAANDPPEVTMFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGQPVT
EGVAESLFLPRTDYSFHKFHYLTFVPSAEDYYDCRVEHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIVG
TVLIIKSLRSGRDPRAQGPL
>gi|532164635|emb|CDG23817.1| MHC class II antigen [Macaca mulatta]
MRPEDRMFETRAVILRTLSLALLLSLGGAGAIKADHVSTYAMFVQTHRPTGEYMFEFDEDEMFYVDLDKKETVWHLEEFG
RAFSFEAQGGLANIAILNNNLNITIWRSNYTQAANDPPEVTMFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGQPVT
EGVAESLFLPRTDYSFHKFHYLTFVPSAEDYYDCRVEHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIVG
TVLIIKSLRSGRDPRAQGPL
>gi|549084805|emb|CDG57900.1| MHC class II protein [Macaca nemestrina] >gi|671708619|gb|AII81826.1| MHC class II antigen [Macaca nemestrina]
MRPEDRMFQTRAVILRTLSLALLLSLGGAGAIKADHVSTYAMFVQTHRPTGEYMFEFDEDEQFYVDLDKKETVWHLEEFG
RAFSFEAQGGLANIAILNNNLNITIRRSNYTQAANDPPEVTMFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGQPVT
EGVAESLFLPRTDYSFHKFHYLTFVPSAEDYYDCRVEHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIVG
TVLIIKSLRSGRDPRAQGPL
>gi|339333281|emb|CBX60096.1| MHC class II antigen [Macaca fascicularis]
MHPEDRMFQTRAVILRTLSLALLLSLGGAGAIKADHVSTYALFVQTHRPTGEFMFEFDEDEQFYVDLDKKETVWHLEEFG
RAFSFEAQGGLANIAILNNNLNITIQRSNYTQAANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGEPVT
EGVAESLFLPRTDYSFHKFHYLTFVPSAEDYYDCRVEHWGLDQPLLKHWEAQEPIQIPETTETVLCALGLVLGLVGIIVG
TVLIIKSLRSGRDPRAQGPL
>gi|337272822|gb|AEI70171.1| MHC class II antigen [Macaca fascicularis]
MHPEDRMFETRAVILRTLSLALLLSLGGAGAIKADHVSTYAMFVQTHRPTGEYMFEFDEDEMFYVDLDKKETVWHLEEFG
RAFSFEAQGGLANIAILNNNLNITIRRSNYTQAANDPPEVTMFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGQPVT
EGVAESLFLPRTDYSFHKFHYLTFVPSAEDYYDCRVEHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIVG
TVLIIKSLRSGRDPRAQGPL
>gi|115345339|ref|NP_001041712.1| major histocompatibility complex, class II, DP alpha precursor [Macaca mulatta] >gi|109452202|dbj|BAE96545.1| major histocompatibility complex class II [Macaca mulatta] >gi|337272816|gb|AEI70168.1| MHC class II antigen [Macaca fascicularis] >gi|339333289|emb|CBX60100.1| MHC class II antigen [Macaca fascicularis]
MHPEDRMFETRAVILRTLSLALLLSLGGAGAIKADHVSTYALFVQTHRPTGEFMFEFDEDEMFYVDLDKKETVWHLEEFG
RAFSFEAQGGLANIAILNNNLNITIRRSNYTQAANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGQPAT
EGVAESLFLPRTDYSFHKFHYLTFVPSAEDYYDCRVEHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIVG
TVLIIKSLRSGRDPRAQGPL
>gi|109452204|dbj|BAE96546.1| major histocompatibility complex class II [Macaca mulatta]
MRPEDRMFETRAVILRTLSLALLLSLGGAGAIKADHVSTYAMFVQTHRPTGEYMFEFDEDEMFYVDLDKKETVWHLEEFG
RAFSFEAQGGLANIAILNNNLNITIRRSNYTQAANDPPEVTMFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGQPVT
EGVAESLFLPRTDYSFHKFHYLTFVPSAEDYYDCRVGHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIVG
TVLIIKSLRSGRDPRAQGPL
>gi|337272798|gb|AEI70159.1| MHC class II antigen [Macaca fascicularis] >gi|629265948|dbj|BAO74093.1| major histocompatibility complex class II antigen DPA [Macaca fascicularis] >gi|671708635|gb|AII81834.1| MHC class II antigen [Macaca nemestrina]
MFQTRAVILRALSLAFLLSLRGAGAIKADHVSTYASFVQTHRPTGEYMFEFDEDEMFYVDLDKKETVWHLEEFGRAFSFE
AQGGLANIAALNNNLNTLIQLSNHTPAANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGEPVTEGVAES
LFLPRTDYRLHKFHYLTFVPSAEDFYDCRVEHWGLDQPLLKHWEAQEPIQMPETRETVLCALGLVLGLVGIIVGTVLIIK
SLQSGRDPRAQGPL
>gi|220681928|gb|ACL80122.1| MHC class II antigen [Macaca mulatta]
MHPEDRMFQTRAVILRTLSLALLLSLGGAGAIKADHVSTYALFVQTHRPTGEYMFEFDEDEQFYVDLDKKETVWHLEEFG
RAFSFEAQGGLANIAILNNNLNIMIRRSNYTQAANDPPEVTMFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGQPVT
EGVAESLFLPRTDYSFHKFHYLTFVPSAEDYYDCRVEHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIVG
TVLIIKSLRSGRDPRAQGPL
>gi|124244249|gb|ABM92290.1| MHC class II antigen [Macaca mulatta] >gi|310789291|gb|ADP24747.1| MHC class II antigen [Macaca mulatta] >gi|337272812|gb|AEI70166.1| MHC class II antigen [Macaca fascicularis] >gi|338176953|gb|AEI83875.1| MHC class II antigen [Macaca fascicularis]
MHPEDRMFQTRAVILRTLSLALLLSLGGAGAIKADHVSTYATFVQTHRPTGEFMFEFDEDEQFYVDLDKKETVWHLEEFG
RAFSFEAQGGLANIAILNNNLNITIRRSNYTQAANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGQPAT
EGVAESLFLPRTDYSFHKFHYLTFVPSAEDYYDCRVEHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIVG
TVLIIKSLRSGRDPRAQGPL
>gi|532690596|emb|CDG23813.2| MHC class II antigen [Macaca mulatta]
MHPEDRMFQTRAVILRTLSLALLLSLGGAGAIKADHVSTYAAFVQTHRPTGEYMFEFDEDEQFYVDLDKKETVWHLEEFG
RAFSFEAQGGLANIAILNNNLNITIQLSNHTQAANDPPEVTVFPKEPVALGQPNTLICHIDKFFPPVLNVTWLCNGEPVT
EGVAESLFLPRTDYSFHKFHYLTFVPSAEDYYDCRVEHWGLDQPLLKHWEAQEPIQIPETTETVLCALGLVLGLVGIIVG
TVLIIKSLRSGRDPRAQGPL
>gi|549084803|emb|CDG57899.1| MHC class II protein [Macaca nemestrina] >gi|671708615|gb|AII81824.1| MHC class II antigen [Macaca nemestrina]
MHPEDRMFQTRAVILRTLSLALLLSLGGAGAIKADHVSTYAMFVQTHRPTGEYMFEFDEDEQFYVDLDKKETVWHLEEFG
RAFSFEAQGGLANIAILNNNLNITIRRSNYTQAANDPPEVTMFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGQPVT
EGVAESLFLPRTDYSFHKFHYLTFVPSAEDYYDCRVEHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIVG
TVLIIKSLRSGRDPRAQGPL
>gi|554505443|emb|CDH93750.1| MHC class II antigen, partial [Macaca mulatta]
AVILRALSLAFLLSLRGAGAIKADHVSTYAMFVQTHRPTGEFMFEFDEDEMFYVDLDKKETVWHLEEFGRAFFFEAQRVL
SHIVILNDSLNIMIQRSNHTPAANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGQPVTEGVAESIFLPR
TGYNFHKFHYLTFVPSAEDVYDCRVEHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIVGSILILKAMRSG
RDPRAQGPL
>gi|338176945|gb|AEI83871.1| MHC class II antigen [Macaca fascicularis] >gi|339333287|emb|CBX60099.1| MHC class II antigen [Macaca fascicularis]
MHPEDRMFQTRAVILRTLSLALLLSLGGAGAIKADHVSTYATFVQTHRPTGEFMFEFDEDEQFYVDLDKKETVWHLEEFG
RAFSFEAQGGLANIAILNNNLNITIRRSNYTQAANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGQPAT
EGVAESLFLPRTDYSFHKFHYLTFVPSAEDYYDCRVEHWGLDQPLLKHWEAQEPIQMPETRETVLCALGLVLGLVGIIVG
TVLIIKSLRSGRDPRAQGPL
>gi|523704011|emb|CDF66304.1| MHC class II antigen, partial [Macaca fascicularis]
AVILRALSLAFLLSLRGAGAIKADHVSTYVMFVQTHRPTGEFMFEFDEDEMFYVDLDKKETVWHLEEFGRAFFFEAQRVL
SHIVILNDSLNIMIQRSNHTPAANDPPEVAVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGQPVTEGVAESIFLPR
TGYNFHKFHYLTFVPSAEDVYDCRVEHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIVGSILILKAMRSG
RDPRAQGPL
>gi|629265914|dbj|BAO74076.1| MHC class II antigen alpha chain [Macaca fascicularis]
MFETRAVILRTLSLALLLSLGGAGAIKADHVSTYALFVQTHRPTGEFMFEFDEDEMFYVDLDKKETVWHLEEFGRAFSFE
AQGGLANIAILNNNLNITIRRSNYTQAANDPPEVTMFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGQPVTEGVAES
LFLPRTDYSFHKFHYLTFVPSAEDYYDCRVEHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIVGTVLIIK
SLRSGRDPRAQGPL
>gi|629265952|dbj|BAO74095.1| major histocompatibility complex class II antigen DPA [Macaca fascicularis]
MFQTRAVILRTLSLALLLSLGGAGAIKADHVSTYATFVQTHRPTGEFMFEFDEDEQFYVDLDKKETVWHLEEFGRAFSFE
AQGGLANIAILNNNLNITIRRSNYTQAANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGQPATEGVAES
LFLPRTDYSFHKFHYLTFVPSAEDYYDCRVEHWGLDQPLLKHWEAQEPIQMPETTETVLCALGLVLGLVGIIVGTVLIIK
SLRSGRDPRAQGPL
>gi|351703548|gb|EHB06467.1| HLA class II histocompatibility antigen, DP alpha chain, partial [Heterocephalus glaber]
PEERMFQARAVILSTLFLAFLLSLQGAGAIKADHVSTYAIFAQTHSPSGEYMFEFDEDEQFYVDLDKKETIWHLPEFGRA
FSFDAQGGLTNIAIANSNLNILIKRTNRTQAPNDPPEVIVFPKEPVELGEPNVLICHVDRFFPPVLNVTWLRNGQPVTVG
VSESIFLPRTDYSFHKFHYLTFLPNTEDVYDCKVEHWGLDEPLLTHWEPQEPIQVTETMETVVCALGLVVGLVGITVGTV
LIIRALQSSRDPRAQGPL
>gi|640777953|ref|XP_008058527.1| PREDICTED: HLA class II histocompatibility antigen, DP alpha 1 chain-like isoform X1 [Tarsius syrichta] >gi|640777955|ref|XP_008058535.1| PREDICTED: HLA class II histocompatibility antigen, DP alpha 1 chain-like isoform X2 [Tarsius syrichta]
MTQTRVVILRVFSLTFLLSLQGAEAIKADHVSTYAIFAQTFRPSGEFMFEFDEDEMFYVDLDKKETVWHLEEFGRAFSFE
AQGGLANIAIANTNLNILIQRSNHTQATSEPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLRNGQPVTEGVSET
IFLPRTDYSFHKFHYLTFMPLTDDVYDCKVEHWGLDEPFLGHWEAQERIDMPETMETVLCALGLLLGLVGIIAGTILIIK
ALHSGRDPRAQGPL
>gi|512862450|ref|XP_004890150.1| PREDICTED: HLA class II histocompatibility antigen, DP alpha 1 chain-like [Heterocephalus glaber] >gi|512969494|ref|XP_004846902.1| PREDICTED: HLA class II histocompatibility antigen, DP alpha 1 chain-like [Heterocephalus glaber]
MFQARAVILSTLFLAFLLSLQGAGAIKADHVSTYAIFAQTHSPSGEYMFEFDEDEQFYVDLDKKETIWHLPEFGRAFSFD
AQGGLTNIAIANSNLNILIKRTNRTQAPNDPPEVIVFPKEPVELGEPNVLICHVDRFFPPVLNVTWLRNGQPVTVGVSES
IFLPRTDYSFHKFHYLTFLPNTEDVYDCKVEHWGLDEPLLTHWEPQEPIQVTETMETVVCALGLVVGLVGITVGTVLIIR
ALQSSRDPRAQGPL
>gi|297661315|ref|XP_002809212.1| PREDICTED: HLA class II histocompatibility antigen, DP alpha 1 chain-like, partial [Pongo abelii]
DHVSTYAAFVQTHSPTGEYMFEFDEDEMFYVDLDKKETVWHLEEFGRAFSFEAQGALANIAILNNNLNTLIQRSNHTQAA
NDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGEPVTEGVAESLFLPRTDYSFHKFHYLTFVPSAEDFYDC
RVEHWGLDQPLLKHWEAQEPIQMPETMETVLCALGLVLGLVGIIVGTVLIMKSLRSGRDPRAQGPL
>gi|533150544|ref|XP_005389523.1| PREDICTED: HLA class II histocompatibility antigen, DP alpha 1 chain-like isoform X1 [Chinchilla lanigera] >gi|533150546|ref|XP_005389524.1| PREDICTED: HLA class II histocompatibility antigen, DP alpha 1 chain-like isoform X2 [Chinchilla lanigera]
MFQSRAVILSTLSLAFLLSLPGAAAIKADHELSNAAFVQTHSPSGEYMFEFDEDEMFYVDLEKKQTVWHLPEFGQAFTFD
AQGGLANIAILKNNLNAVIHHSNRTQAPNDPPEVTVFPKQPVELGEPNILICHVDKFFPPVLNVTWLRNGQPVTEGVSES
IFLPRTDYSFHKFLYLTFLPNTEDVYDCKVEHWGLDEPYLKHWEPQEPIQVTETTETVVCALGLLVGLVGIIVGTVLIIR
ALRSSRDPRAQGPL
>gi|395832592|ref|XP_003789344.1| PREDICTED: HLA class II histocompatibility antigen, DP alpha 1 chain-like [Otolemur garnettii]
MRTEESVWNCGEKYRRAQLQSLSTPSLPLLTIVNSRPPVFPEDRMFQTRAVILRALCLAFLLSLQGAGAIKADHVSTYFE
FVQTHRPSGEYMFEFDEDEMFYVDLDKKETVWHLPLFAQAFSFEAQGGLANIAIMKDNLNIMIRHSNHSQDTNEPPEVTV
FPKEPVELGQPNTLICHINKFFPPVLNVTWLRNGQPVTQGVGESLFLPRTDYNFHKFHYLTFVPLADDVYDCKVEHWGLD
EPFLRHWEAQEPIQMPETTETVLCALGLILGLAGIIAGIILIVKALRSGRDPRAQGSL
>gi|20218975|dbj|BAB90979.1| major histocompatibility complex class II [Cavia porcellus]
MFQSKVVILCTLSLVFLLSLQGAGAIEADHVSTFAAFVQTQRPSGEYMFELDEDEMFYVDLDKKQTVWHLPEFGQAFTFD
AQGGLTNIAILRENLNGAIKAFNHTQAPNDPPEVTVFPKEPVQLGEPNILICHVDKFFPPVLSVTWLRNGQPVTEGASES
IFLPRTDYSFQKLHYLTFLPNTEDVYDCKVEHWGLDEPYLKHWEPQEPVQVTETTETVVCALGLVVGLVGIIVGTVLIIR
ALRSSRDPRAQGPL
>gi|533150548|ref|XP_005389525.1| PREDICTED: HLA class II histocompatibility antigen, DP alpha 1 chain-like isoform X3 [Chinchilla lanigera]
MFQSRAVILSTLSLAFLLSLPGAAAIKDHELSNAAFVQTHSPSGEYMFEFDEDEMFYVDLEKKQTVWHLPEFGQAFTFDA
QGGLANIAILKNNLNAVIHHSNRTQAPNDPPEVTVFPKQPVELGEPNILICHVDKFFPPVLNVTWLRNGQPVTEGVSESI
FLPRTDYSFHKFLYLTFLPNTEDVYDCKVEHWGLDEPYLKHWEPQEPIQVTETTETVVCALGLLVGLVGIIVGTVLIIRA
LRSSRDPRAQGPL
>gi|507617709|ref|XP_004624313.1| PREDICTED: HLA class II histocompatibility antigen, DP alpha 1 chain-like [Octodon degus]
MSPEGRMFQTRAVVLSSLSLAFLLGLQGAGAIKADHVSIYGMFAQTHRPSGEFLFEFDEDEQFYVDKDKKETIWHLPEFG
RAFSFDAQGGLTNIAIATSNLNIMIQRTNHTQEPNDPPEVTVFPKEPVELGEPNILICHVDQFFPPVLNVTWLKNGQPVT
EGVSESIFLPRTDYSFHQFHYLTFLPNTEDFYDCKVEHWGLDEPYLTHWEPQEPVEVTETTATLVCALGLVVGLVGIIVG
TVLIIRALRSGHNPRAQGPL
>gi|488589145|ref|XP_004479864.1| PREDICTED: HLA class II histocompatibility antigen, DP alpha 1 chain-like isoform 2 [Dasypus novemcinctus]
MLQNRALIQTALALAFLLSLPGAGAIKADHVSTYAEFVQTHRPSGEFMFEFDEDEMFYVDLDKKETVWHLPEFGRAFSFE
AQGGLADIAILKHNLNNLIKRSNHTQAPSEPPEVIVFPKEPVELGQPNTLICHLDKFFPPVLNVTWLRNGQPVTEGVAES
LYLPRTDYSFHKFHYLTFVPSAEDFYDCKAEHWGLDKPHLEHWEVQEPLQMPETRETVVCALGLAVGLAGLVAGTVLITR
ALRSSSDARARGHL
>gi|514468746|ref|XP_003473758.2| PREDICTED: HLA class II histocompatibility antigen, DP alpha 1 chain-like [Cavia porcellus]
MFQNKAVILSTFSLAFLLSLQGAGAIKADHVSTYAEFVQRSRPSGEFIFDIDEDEMFYVDLDSRQTVWRLLEFGQALSPL
DAQAALTNIAILRNNLNIMIQRSNHTQAPSDPPEVTVFPKEPVELGKPNTLICHVDKFFPPVLNVTWLQNGQPVTEGASE
SIFLSRTDYNFHKFHYLTFLPNTEDVYDCKVEHWGLDEPYLKHWEPQEPVQVTETTETVVCALGLVVGLVGIIVGTVLII
RALRSRRDPRAQGPL
>gi|471419396|ref|XP_004391188.1| PREDICTED: HLA class II histocompatibility antigen, DP alpha 1 chain-like, partial [Trichechus manatus latirostris]
LLSLQRAGAIKADHVSTYEKFVQTYSPSGEYMFELDEDEMFYVDLDKKETVWHLPEFGRAFSFDAQGGLADLAILKSNLK
IMIQRSNHTQATNEAPEVTVFPKEPVELGQPNTLICHVDKFFPPVLNVTWLRNGQTVIDGVGESIFLPRTDYKFYKFHYL
TFVPSAEDVYDCKVEHWGLEEPLLKHWEAQEPIQVPETTETVVCALGLAVGLVGIVAGTVLIIKALRSSSDPRDRGPL
>gi|634843893|ref|XP_007937498.1| PREDICTED: HLA class II histocompatibility antigen, DP alpha 1 chain-like [Orycteropus afer afer]
MFQIKDVILRALALVSLLSLQRAGAIKADHVSTYAMFVQTHRPSGEFMFEFDEDEQFYVDLDKKETVWHLPEFGRAFSFE
AQGGLSNIAILKSNLKIMIERSNHTQGSNEPPEVIVFPKEPVQLGQPNTLICHIDKFFPPVLNVTWLRNGQTVSEGVGES
LFLPRTDYKFYRFQKFHYLTFVPSVDDVYDCKVEHWGLEEPLLKHWEAQEPIQVSEMTETVVCALGLAVGLVGIIAGTVL
IIKALRSSSDPWNQGPL
>gi|634844262|ref|XP_007937629.1| PREDICTED: HLA class II histocompatibility antigen, DP alpha 1 chain-like [Orycteropus afer afer]
MDKTFQNNLNINNGNSGPYRPHIVHPEESMFQIKDVILRALALVSLLSLQRAGAIKADHVSTYAMFVQTHRPSGEFMFEF
DEDEMFNVDLDKKETVWHLPEFGRAFSFEAQGGLSNIAILRSNLKIMIERSNHTQGSNEPPEVIVFPKEAVQLGQPNTLI
CHVDKFFPPVLNVTWLRNGQTVSEGVGESLFLPRTDYKFYRFQKFHYLTFVPSVDDVYDCKVEHWGLEEPLLKHWEAQEP
IQVSEMTETVVCALGLAVGLVGIIAGTVLIIKALRSSSDPWNQGPL
>gi|634843896|ref|XP_007937499.1| PREDICTED: HLA class II histocompatibility antigen, DP alpha 1 chain-like [Orycteropus afer afer]
MFQIKDVILRALALVSLLSLQRAGAIKADHVSTYAMFVQTHRPSGEFMFEFDEDEMFNVDLDKKETVWHLPEFGQAFSFE
AQGGLSNIAILRSNLKIMIERSNHTQGSNEPPEVIVFPKEPVQLGQPNTLICHIDKFFPPVLNVTWLRNGQTVSEGVGES
LFLPRTDYKFYRFQKFHYLTFVPSVDDVYDCKVEHWGLEEPLLKHWEAQEPIQVSEMMETVVCALGLAVGLVGIIAGTVL
IIKALRSSSDPWNQGPL
>gi|488589143|ref|XP_004479863.1| PREDICTED: HLA class II histocompatibility antigen, DP alpha 1 chain-like isoform 1 [Dasypus novemcinctus]
MLQNRALIQTALALAFLLSLPGAGAIKDHVSTYAEFVQTHRPSGEFMFEFDEDEMFYVDLDKKETVWHLPEFGRAFSFEA
QGGLADIAILKHNLNNLIKRSNHTQAPSEPPEVIVFPKEPVELGQPNTLICHLDKFFPPVLNVTWLRNGQPVTEGVAESL
YLPRTDYSFHKFHYLTFVPSAEDFYDCKAEHWGLDKPHLEHWEVQEPLQMPETRETVVCALGLAVGLAGLVAGTVLITRA
LRSSSDARARGHL
>gi|504157575|ref|XP_004590315.1| PREDICTED: HLA class II histocompatibility antigen, DP alpha 1 chain-like [Ochotona princeps]
MFQIRIVIMTALSLTSLLNAQRGVAAIKADHVSVYVTFAQTHTPSGEYMFEFDEDEMFYVDEDKRQTIWHLPEFGQAFSF
DTQGGLANTATAKENLKILIRRSNYTQAANEAPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNITWLRNGQPVTEGVAE
SIFLPSTEFRFHKFHYLTFLPTADDVYDCKVEHWGLERPLLTHWEAQEPIQMAETTETVVCALGLLVGLVGIVVGTILII
QALRSSHDPRARGPL
>gi|514468750|ref|XP_003473762.2| PREDICTED: HLA class II histocompatibility antigen, DP alpha 1 chain-like [Cavia porcellus]
MFQNRAVILSLAFLLSLQGAGAIKVDHVSRYAEFVQTQTPSGEYMFELDEDEQFYVDLDKRQTVWRLPEFGQAFAFDAQG
GLANIAIMRTNLNFAIQDSNHTQAPSDPPEVTVFPKEPVELGEPNILICHVDKFFPPVLNVTWLRNGQPVTEGASESIFL
PRTDYSFQKLHYLTFLPNTEDVYDCKVEHWGLDEPYLKHWEPQEPVQVTETTETVVCALGLMAGLLGIIVGTVLIIRALR
STRDPRAQGPL
>gi|667297714|ref|XP_008580033.1| PREDICTED: HLA class II histocompatibility antigen, DP alpha 1 chain-like [Galeopterus variegatus]
MFQTKAVILRALSFTFLLSLQGTGAIKVEHVSTFAMFVQTHRPSGEYMFEFDEDEQFYVDLDKRETVWHLPEFGRAFAFE
AQSGLANIAILNNNLNVLIQRSNHTQATNEPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLRNGQPVTEGVAES
LFLPRTDYSFRKFLYLTFVPSAEDVYDCKVEHWGLDEPFLKHWEAEELIQVPEMMKTVVCALGLLVGLVGIVAGTIIIIK
ALCSGHDPWARGHL
>gi|585645828|ref|XP_006882259.1| PREDICTED: HLA class II histocompatibility antigen, DP alpha 1 chain-like [Elephantulus edwardii]
MCTLKRKMFQKKDVILGAFILTSLLSIQRAGAIEADHVSTYAMFAQTESPTGEYMFEFDEDEQFYVDLDKKETVWHLPEF
GRAFSFEAQGGLSNIVIMKSNLKIMIDRSNHTQDTNVPPEVTVFPKEPVELGQPNTLICHIDNFFPPVLNVTWLRNGEVV
TKGVGESLFLPRTDYKFYNFQKLHYLTFVPSAEDVYDCKVEHWGLEEPFLKHWEAQEPIQVPETTETVVCILGLAVGLVG
IIAGTVLIIKALRSSSNPQELGIL
>gi|471419099|ref|XP_004391042.1| PREDICTED: HLA class II histocompatibility antigen, DP alpha 1 chain-like [Trichechus manatus latirostris]
MAQSRDLTYGSKDMPAILPSKVVIIPHNVHPEERMFQIKDIILRALALTSLLSLQRAGAIKADHVSTYAIFIQTHSPSGE
YMFEFDEDEMFYVDLDKKETVWHLPEFGQAFFFDAQAGPTYIASLKTLLNYMIQLSNHTQATNEAPEVTVFPKEPVQLGQ
PNTLICHVDKFFPPVLNVTWLRNGQTVIEGVGESIFLPRTDYNFYKFHYLTFMPSAEDVYDCKVEHWGLEKPLLKHWEAQ
EPIQIPETTETVVCALGLAVGLMGIIAGTVFIIKALHSSSDPRDRGPL
>gi|667311864|ref|XP_008584894.1| PREDICTED: HLA class II histocompatibility antigen, DP alpha 1 chain-like isoform X2 [Galeopterus variegatus]
MFQTKDVILRALSFTFLLSLQGAGAIKADHELSNAVFVQTNRPSGEYMFEFDKDEFFYVDLDKKETVWHLPEFGRAFAFE
AQGGLANIAILNNNLNVLIQRSNHTQATNEPPEVTVFPKEPVELGQPNMLICFIDKFFPPVLNVTWLRNGQPVTEGVAES
LFLPRTDYSFRKFLYLTFVPSAEDVYDCKVEHWGLDDPLLKHWEAQEPILVAETMETVVCTLGLVVGLVGIVAGTIIIIK
ALRSGHDPQARGPL
>gi|586459484|ref|XP_006860403.1| PREDICTED: HLA class II histocompatibility antigen, DP alpha 1 chain-like [Chrysochloris asiatica]
MPSEEKVLQTKAVILRALVFLLSLQSTGAIKADHVSTYAIFVQTQNPTGEFMFEFDEDEQFYVDLDKKETVWRLPEFGRA
FSFEAQGGLANIAVMKNNLDIMIKRSNHTQAANDAPEVIVFSKEPVELGQPNTLICHVDKFFPPVLNITWLRNGQMVTEG
VGESLYLPRTDYKFHKFYYLTFVPSDEDIYDCKVEHWGLEQPLLKHWEAQESMQVPETTETMVCALGLAVGLMGIITGTI
LIIRALRSSSDPRARGPL
>gi|667311861|ref|XP_008584893.1| PREDICTED: HLA class II histocompatibility antigen, DP alpha 1 chain-like isoform X1 [Galeopterus variegatus]
MFQTKDVILRALSFTFLLSLQGAGAIKDHELSNAVFVQTNRPSGEYMFEFDKDEFFYVDLDKKETVWHLPEFGRAFAFEA
QGGLANIAILNNNLNVLIQRSNHTQATNEPPEVTVFPKEPVELGQPNMLICFIDKFFPPVLNVTWLRNGQPVTEGVAESL
FLPRTDYSFRKFLYLTFVPSAEDVYDCKVEHWGLDDPLLKHWEAQEPILVAETMETVVCTLGLVVGLVGIVAGTIIIIKA
LRSGHDPQARGPL
>gi|224342|prf||1102205A antigen HLA DAalpha
KETVWHLEEFGQAFSFEAQGGLANIAILNNNLNTLIQRSNHTQATNDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLN
VTWLCNGELVTEGVAESLFLPRTDYSFHKFHYLTFVPSAEDFYDCRVEHWGLDQPLLKHWEAQEPIQTPETTETVLCALG
LVLGLVGIIVGTVLIIKSLRSGHDPRAQGTL
>gi|344310070|ref|XP_003423697.1| PREDICTED: HLA class II histocompatibility antigen, DP alpha 1 chain-like, partial [Loxodonta africana]
GSKSTILELLAPIPHQRSCACNDHRSHHVRPEKRMFQIKDMILRALALACLLSAQRAGAIKADHVSTFAMFTQTHVPSGE
YMFEFDEDEMFSVNLDKKETVWHLPEFGKAIYFDAEAGLSYMARMESNLKYGIQHLNYTQATNDAPEVTVFPKEPVELGQ
PNTLICHIDKFFPPVLNVTWLRNGQTVIEGVGESLFLPRTDYKFYKFHYLTFLPSAEDVYDCKVEHWGLEEPLLKHWEAQ
EPIQVPETTETVVCALGLAVGLVNIIAGTVLIIKALHSSSDPRDRGPL
>gi|562873391|ref|XP_006164596.1| PREDICTED: HLA class II histocompatibility antigen, DP alpha 1 chain-like [Tupaia chinensis] >gi|444519081|gb|ELV12564.1| HLA class II histocompatibility antigen, DP alpha 1 chain [Tupaia chinensis]
MFQTKAVMLSALSLAYLLSLQGAGAIQADHVSIYLMFAQTQRPSGEYMFQIDGDEQFYVDQDKKETIWSLEEFGRAFSFE
AQGGLQNIAIVKGNLNIMMQRSNHTPASNEPPEVTVFPKESVELGKPNVLICHVDKFSPPVLNVTWLRNGQPVTDGVTES
LFLPSTEFRFHKFLYLTFVPSAEDVYDCRVEHWGLEEPLLMHWEAQEPVLVPETTETMICALGLVLGLVGIIVGTILIIK
ALRSSRDPRAQGPL
>gi|528745979|gb|AGS42153.1| MHC class II antigen, partial [Macaca mulatta]
LLSLRGAGAIKADHVSTYASFVQTHRPTGEYMFEFDEDEMFYVDLDKKETVWHLEEFGRAFSFEAQGGLANIAALNHNLN
TLIQRSNHTQAANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGEPVTEGVAESLFLPRTDYRLHKFHYL
TFVPSAEDFYDCRVEHWGLDQPLLKHWEAQEP
>gi|665764549|pdb|4P4K|A Chain A, Structural Basis Of Chronic Beryllium Disease: Bridging The Gap Between Allergic Hypersensitivity And Auto Immunity >gi|665764553|pdb|4P4K|E Chain E, Structural Basis Of Chronic Beryllium Disease: Bridging The Gap Between Allergic Hypersensitivity And Auto Immunity >gi|665764557|pdb|4P4R|A Chain A, Structural Basis Of Chronic Beryllium Disease: Bridging The Gap Between Allergic Hypersensitivity And Autoimmunity >gi|665764559|pdb|4P4R|C Chain C, Structural Basis Of Chronic Beryllium Disease: Bridging The Gap Between Allergic Hypersensitivity And Autoimmunity >gi|665764561|pdb|4P57|A Chain A, Mhc Tcr Peptide Complex >gi|665764563|pdb|4P57|C Chain C, Mhc Tcr Peptide Complex
IKADHVSTYAAFVQTHRPTGEFMFEFDEDEMFYVDLDKKETVWHLEEFGQAFSFEAQGGLANIAILNNNLNTLIQRSNHT
QATNDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGELVTEGVAESLFLPRTDYSFHKFHYLTFVPSAEDF
YDCRVEHWGLDQPLLKHWEAQEP
>gi|479336248|gb|AGJ74700.1| MHC class II antigen, partial [Macaca mulatta]
LLSLRGAGAIKADHVSTYAMFVQTHRPTGEFMFEFDEDEMFYVDLDKKETVWHLEEFGQAISFEAQGGLANIAILNHNLN
ITIQRSNYTQAANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGEPVTEGVAESLFLPRTDYSFHKFHYL
TFVPSAEDYYDCRVEHWGLDQPLLKHWEAQEP
>gi|532066070|ref|XP_005318892.1| PREDICTED: HLA class II histocompatibility antigen, DP alpha 1 chain-like [Ictidomys tridecemlineatus]
MFQTGTVILRALSLAFLLSLQGAGAIEVDHVISFAMFAQTNAPTGEFMYEFDEDEMFYVDRDKKETIWQLSEFGRGLSFD
SQGGLTNIAIAKSNLDIMTENSNHTQAASEPPEVTVFPKKPVELGQPNTLICHVDRFFPPVLNVTWLRNGQPVTEGVSES
VFLPRTDYNFHKFHYLTFVPSDEDVYDCKVEHWGLQEPSLNHWEAQEPVQVTEATETVVCALGLVVGLVGIITGTVLITR
ALRSSRDPRAQGPL
>gi|479336266|gb|AGJ74709.1| MHC class II antigen, partial [Macaca mulatta]
LLSLRGAGAIKADHVSTYVVFTQTHRPTGEFMFEFDEDEQFYVDLDKKETVWHLEEFGRAFSFEAQGGLANIAISNNNLN
TMIQRSNYTQAANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGEPVTEGVAESLFLPRTDYSFHKFHYL
TFVPSAEDYYDCRVEHWGLDQPLLKHWEAQEP
>gi|294662544|pdb|3LQZ|A Chain A, Crystal Structure Of Hla-dp2
IKADHVSTYAAFVQTHRPTGEFMFEFDEDEMFYVDLDKKETVWHLEEFGQAFSFEAQGGLANIAILNNNLNTLIQRSNHT
QATNDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGELVTEGVAESLFLPRTDYSFHKFHYLTFVPSAEDF
YDCRVEHWGLDQPLLKHWEAQ
>gi|479336254|gb|AGJ74703.1| MHC class II antigen, partial [Macaca mulatta]
LLSLRGAGAIKADHVSTYAMFVQTHRPTGEFMFEFDEDEMFYVDLDKKETVWHLEEFGQAISFEAQGGLANIAILNHNLN
ITIQRSNYTQAANDPPEVTVFPKEPVELGQPNTLICHIDKLFPPVLNVTWLCNGEPVTEGVAESLFLPRTDYSLHKFHYL
TFVPSAEDYYDCRVEHWGLDQPLLKHWEAQEP
>gi|562880960|ref|XP_006168090.1| PREDICTED: HLA class II histocompatibility antigen, DP alpha 1 chain-like [Tupaia chinensis] >gi|444515654|gb|ELV10948.1| HLA class II histocompatibility antigen, DP alpha 1 chain [Tupaia chinensis]
MFQTNAVMLSALSLAYLLSLQEAGAIQADHVSTYLAFTQTHRPSGEYMSQLDGDEVFYVDQDKRETIWSLEEFGHAFSFD
AQGALQNFAVVKSYLNVLTQRSNHTQASNEPPEVTVFPKKSVELGQPNVLICHMDKFFPPVLNVTWLRNGQPVTDGVAES
LFLPTTEFRFHKFLYLTFVPSAEDVYDCRVEHWGLEEPLLMHWEAQEPVLVPETTETVVCALGLVLGLVGIIVGTVFIIK
ALRSSRDPRTQGPL
>gi|479336244|gb|AGJ74698.1| MHC class II antigen, partial [Macaca mulatta] >gi|528745981|gb|AGS42154.1| MHC class II antigen, partial [Macaca mulatta]
LLSLRGAGAIKADHVSTYASFVQTHRPTGEFMFEFDEDEQFYVDLDKKETVWHLEEFGRAFSFEAQGGLANIAALNHNLN
ILIQRSNHTKAANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGEPVTEGVAESLFLPRTDYRLHKFHYL
TFVPSAEDFYDCRVEHWGLDQPLLKHWEAQEP
>gi|479336252|gb|AGJ74702.1| MHC class II antigen, partial [Macaca mulatta]
LLSLGGAGAIKADHVSTYAMFVQTHRPTGEFMFEFDEDEQFYVDLDKKETVWHLEEFGRAFSFEAQGGLANIAILNHNLN
ITIQRSNYTQAANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGEPVTEGVAESLFLPRTDYSFHKFHYL
TFVPSAEDYYDCRVEHWGLDQPLLKHWEAQEP
>gi|562876431|ref|XP_006165999.1| PREDICTED: HLA class II histocompatibility antigen, DP alpha 1 chain-like [Tupaia chinensis]
MRAPKRMFQTKAVILSALSLAYLLSLQGAGAIKADHVSIYLVLAQSHRPSGECMFQFDGDEVFYVDLDKKETIWHMEEFG
HAFSYEAQDGLKNLAVAKENLIIMIRRSNHTQASNEPPEVTVFPKKSVELGQPNVLICHVDKFFPPVLNVTWLRNGQPVT
DGVTESLFLPSTEFRFHKFLYLTFVPSAEDVYDCRVEHWGLEEPLLMHWEAQESILVPETTETVVCALGLVLGLVGIIVS
TVFIIKDLHSSRNPWVQGPL
>gi|479336258|gb|AGJ74705.1| MHC class II antigen, partial [Macaca mulatta]
LLSLRGAGAIKADHVSTYALFVQTHRPTGEYMFEFDEDEMFYVDLDKKETVWHLEEFGRAFSFEAQGGLDDIATLKYNLN
ITIQRSNHTQAANDPPEVMVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGEPVTEGVAESLFLPRTDYSFHKFHYL
TFVPSAEDFYDCRVEHWGLDQPLLKHWEAQEP
>gi|479336270|gb|AGJ74711.1| MHC class II antigen, partial [Macaca mulatta]
LLSLGGAGAIKADHVSTYALFVQTHRPTGEYMFEFDEDEMFYVDLDKKETVWHLEEFGRAFSFEAQGGLDDIATLKYNLN
ITIQRSNHTQAANDPPEVMVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGEPVTEGVAESLFLPRTDYSFHKFHYL
TFVPSAEDFYDCRVEHWGLDQPLLKHWEAQEP
>gi|507531549|ref|XP_004649852.1| PREDICTED: HLA class II histocompatibility antigen, DP alpha 1 chain-like [Jaculus jaculus]
MFQTTAVVQGALSLAFLLSLPGAGGIKEEHVSNFGIFVQTQKPTGEYMYEFDDDEIFYVDRDKEETIWRLEEFGSAFSFD
AQGGLTNIAIMETNLDIMIKRSNHTQAPSEPPEVIVFPKNPVELGQPNILICHIDKFFPPVLNVTWLRNRQPVTEGASET
IFLPRTDYRFHKFHYLTFLPKAEDVYDCQVEHWGLDGPKLTHWEPQEPVQVTETTQTVICALGLVVGLVGIIAGTALIIK
SLRSSRDPRDPWAQGRL
>gi|479336246|gb|AGJ74699.1| MHC class II antigen, partial [Macaca mulatta]
LLSLRGAGAIKADHVLTFTTFVQTHRPTGEFMYELDEDEIFFVDLDKKETIWHLEEFGRAFSFEAQGGLANIAISNNNLN
VTIQLSNHTQATNDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGQPVTEGVTESLFLPRTDYSFHKFHYL
TFVPSAEDYYDCRVEHWGLDQPLLKHWEPQEP
>gi|479336256|gb|AGJ74704.1| MHC class II antigen, partial [Macaca mulatta]
LLSLRGAGAIKADHVLTFTTFVQTHRPTGEYMYELDEDEIFFVDLDKKETIWHLEEFGRAFSFEAQGGLANIAISNNNLN
VTIQLSNHTQATNDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGQPVTEGVTESLFLPRTDYSFHKFHYL
TFVPSAEDYYDCRVEHWGLDQPLLKHWEPQEP
>gi|667484678|pdb|3WEX|A Chain A, Crystal Structure Of Hla-dp5 In Complex With Cry J 1-derived Peptide (residues 214-222) >gi|667484680|pdb|3WEX|C Chain C, Crystal Structure Of Hla-dp5 In Complex With Cry J 1-derived Peptide (residues 214-222) >gi|667484682|pdb|3WEX|E Chain E, Crystal Structure Of Hla-dp5 In Complex With Cry J 1-derived Peptide (residues 214-222) >gi|667484684|pdb|3WEX|G Chain G, Crystal Structure Of Hla-dp5 In Complex With Cry J 1-derived Peptide (residues 214-222)
IKADHVSTYAMFVQTHRPTGEFMFEFDEDEQFYVDLDKKETVWHLEEFGRAFSFEAQGGLANIAILNNNLNTLIQRSNHT
QAANDPPEVTVFPKEPVELGQPNTLICHIDRFFPPVLNVTWLCNGEPVTEGVAESLFLPRTDYSFHKFHYLTFVPSAEDV
YDCRVEHWGLDQPLLKHWEAQSGPSSGENLYFQ
>gi|560908585|ref|XP_006180607.1| PREDICTED: HLA class II histocompatibility antigen, DP alpha 1 chain-like [Camelus ferus]
MEMHLEDTGSQTRVMILQALTLAALLSPHGAGAFQVDHVSTYAEFVQTHKPSGEYMFEFDEDEQFYVDLDKKETVWHLPE
FIHAFDYDAQRGIADIVMARKNLNTMIQRSNHTRATSEPPEVTVFPKEPVELGQPNTLICHVDKFFPPVLNVTWLRNGQA
VTEGVAETIFLPSTEFRFHQFHYLTFLPTVEDVNDCRVEHWGLDQPLLKHWEAQEPIQVPETMETAVCTLGLAVGLVGII
TGTIVLKTRLSESVPSCRGPCDNLSSTEEDRGESPASDLL
>gi|479336260|gb|AGJ74706.1| MHC class II antigen, partial [Macaca mulatta]
LLSLRGAGAIKADHVSTFAMFVQTHRPTGEYMSEFDEDEMLYVDLDKKETVWHLEEFGRALFLDAQGGLANIAALNNHLN
IMIQRSNHSQAANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGKLVTKGVTESLFLPRTDYRLHKFHYL
TFVPSAEDYYDCRVEHWGLDQPLLKHWEAQEP
>gi|432094626|gb|ELK26132.1| HLA class II histocompatibility antigen, DP alpha 1 chain [Myotis davidii]
MLLPAVALAVLLSPCGTGAIRADHVSTYAEFVQTHSPSGEYMFQFDGDEQFYVDLDKKETVWRLPEFIHSFDYDARRGIA
DIVMARKNLDTLIQRSNHTRATNEPPEVTVFPKEPVELGQPNTLICHVDKFFPPVLNVTWLRNGRAVTEGVAETIFLPST
EFRFHKFHYLTFVPSAEDVYDCRVEQWGLAGPLLGHWEAQESIQVPETTETVVCALGLLVGLAGIIAGTIVLKSRRPDSV
PGCRGPCDKLSVTEEDGGETPGSGLL
>gi|641735514|ref|XP_008158319.1| PREDICTED: RLA class II histocompatibility antigen, DP alpha-1 chain [Eptesicus fuscus]
MLLPAVALAVLLSPWGTGAIRADHVSTYAEFVQTHSPSGEYMFQFDSDEQFYVDLDKRETVWRLPEFIHTFDYDARRGLA
DIAMARKNLDTLIQRSNHTRATNEPPEVTVFPKEPVELGQPNTLICHVDKFFPPVLSVTWLRNGLAVTEGVAETIFLPST
EFRFHKFHYLTFVPSAEDVYDCRVEHWGLARPLLGHWEAQEPFQVPETTETVVCALGLVVGLAGIIAVTIVLKSRRPVSV
PGCRGPCTIDYLLPPKIAAHLELGAATCFAWDLGR
>gi|479336264|gb|AGJ74708.1| MHC class II antigen, partial [Macaca mulatta]
LLSLRGAGAIKADHVSTYAMFVQTHNPTGEYMFEFDEDEQFYVDLDKKETVWHLEEFAQAFSFEAQGGLDDIATLKYNLN
IMIQRSNHTQAANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGEPVTEGVAESLFLPGTDFSFHKFHYL
TFVPSVEDVYDCRVEHWGLDQPFLKHWEAQEP
>gi|521027003|gb|EPQ08791.1| HLA class II histocompatibility antigen, DP alpha 1 chain [Myotis brandtii]
MLLPAVALAVLLSPCGTGAIRADHVSTYAEFVQTHSPSGEYMFQFDGDEQFYVDLDKKETVWRLPEFIHTFDYDARRGIA
DIVMARKNLDTLIQRSNHTRATNEPPEVTVFPKEPVELGQPNTLICHVDKFFPPVLNVTWLRNRRAVTEGVAETIFLPST
EFRFHKFHYLTFVPSAEDVYDCRVEHWGLAGPLLGHWEAQEPIQVPETMETVVCALGLLVGLAGIIAGTIVLKSRRPDSV
PGCRAPCESSGVGRRGTVERSGQRYGWGYVTARGPAAQARRSQHCGAGFGEEKRPVPARRRRELQAEAPACLPGWAV
>gi|291396007|ref|XP_002714660.1| PREDICTED: RLA class II histocompatibility antigen, DP alpha-1 chain [Oryctolagus cuniculus]
MFQNKAGILMALTLAFLLNLQGAEAITAEHVSVFVIFAQTHEPSGECMFEFDEDEVFHVDLDKKQAIWYLPEFDRMFSVE
AQGGLANIAAAKSNLNACIQHSNHTQAPNEPPEVIVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLRNGQPVTEGVSET
VFLASTEFRFRKFHYLAFVPSAADVYDCRVEHWGLDAPLLTHWEAQEPIQMPETTETVVCALGLVVGLAGVVVGIVLITK
ALRSSPDPRARGPL
>gi|390196876|gb|AFL70533.1| MHC class II protein, partial [Macaca fascicularis]
ADHVSTYASFVQTHRPTGEFMFEFDEDEMFYVDLDKKETVWHLEEFGRAFSFEAQGGLANIAALNHNLNTLIQRSNHTQA
ANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGEPVTEGVAESLFLPRTDYRLHKFHYLTFVPSAEDFYD
CRVEHWGLDQPLLKHW
>gi|479336250|gb|AGJ74701.1| MHC class II antigen, partial [Macaca mulatta]
LLSLRGAGAIKADHVSTYAMFVQTHRPTGEFMFEFDEDEMFYVDLDKKETVWHLEEFGRAFSFEAQGGLANIAALNNNLN
TLIQLSNHTPAANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGEPVTEGVAESLFLPRTDYRLHKFHYL
TFVPSAEDYYDCRVEHWGLDQPLLKHWEAQEP
>gi|479336262|gb|AGJ74707.1| MHC class II antigen, partial [Macaca mulatta]
LLSLRGAGAIKADHVSTYAAFVQTHRPTGEFMFEFDEDEQFYVDLDKKETVWHLEEFGRAFSFEAQGGLANIAILNNNLN
ITIQRSNYTQAANDPPEVTVFPKEPVELGQPNILICHIDKFFPPVLNVTWLCNGQPATEGVAESLFLPRTDYSFHKFHYL
TFVPSAEDYYDCRVEHWGLDQPLLKHWEAQEP
>gi|390196872|gb|AFL70531.1| MHC class II protein, partial [Macaca fascicularis]
ADHVSTYAMFVQTHRPTGEFMFEFDEDEMFYVDLDKKETVWHLEEFGRAFSFEAQGGLANIAILNDNLNITIQRSNYTQA
ANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGEPVTEGVAESLFLPRTDYSFHKFHYLTFVPSAEDYYD
CRVEHWGLDQPLLKHW
>gi|390196874|gb|AFL70532.1| MHC class II protein, partial [Macaca fascicularis]
ADHVSTYASFVQTHRPTGEFMFEFDEDEMFYVDLDKKETVWHLEEFGRAFSFEAQGGLANIAALNHNLNNLIQRSNHTQA
ANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGEPVTEGVAESLFLPRTDYRLHKFHYLTFVPSAEDFYD
CRVEHWGLDQPLLKHW
>gi|390196868|gb|AFL70529.1| MHC class II protein, partial [Macaca fascicularis] >gi|390196880|gb|AFL70535.1| MHC class II protein, partial [Macaca fascicularis] >gi|390196890|gb|AFL70540.1| MHC class II protein, partial [Macaca fascicularis]
ADHVSTYAMFVQTHRPTGEFMFEFDEDEMFYVDLDKKETVWHLEEFGQAISFEAQGGLANIAILNHNLNITIQRSNYTQA
ANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGEPVTEGVAESLFLPRTDYSFHKFHYLTFVPSAEDYYD
CRVEHWGLDQPLLKHW
>gi|344298870|ref|XP_003421113.1| PREDICTED: HLA class II histocompatibility antigen, DP alpha 1 chain-like [Loxodonta africana]
MWDYKAFLRDKEPGLSPDSASPGPDCPAEPQGAGAVRSNHVSAYAEFVQTHKPSGEYMFESDEGEQFYMDPDEETVWHMP
ELIHAFDFDAWTGIADIIMTRKNLNTLIQWSNYTRATSEAPEVTVFPKEPVELGQPNTLICHVDRFFPPVLNVTWLRNGQ
TITEGVGESLFLPRTDYKFYKFHKFHYLTFVPSAEDVYDCKVEPWGLEEPLLKHWEAQEPIQVPETTENVVCALGLVVGL
VSIIAGTVLIIKALRSSSDPRDRGPL
>gi|528764629|gb|EPY84288.1| MHC class II antigen-like protein [Camelus ferus]
MILQALTLAALLSPHGAGAFQVDHVSTYAEFVQTHKPSGEYMFEFDEDEQFYVDLDKKETVWHLPEFIHAFDYDAQRGIA
DIVMARKNLNTMIQRSNHTRATSEPPEVTVFPKEPVELGQPNTLICHVDKFFPPVLNVTWLRNGQAVTEGVAETIFLPST
EFRFHQFHYLTFLPTVEDVNDCRVEHWGLDQPLLKHWEAQEPIQVPETMETAVCTLGLAVGLVGIITGTIVLKTRLSESV
PSCRGPSDHMGSYGPAFYQSYDASGQFTYDFDGEQLFSVDLKKTEAVWRLPEFGNFAYFDPQSGLASIAMIKAHLDVLVE
RSNRTRATNVPPRVTILPKSRVELGQPNVLICIVDNIFPPVINITWLRNGQTVTEGVAQTSFYAQPDHLFRKFHYLTFVP
SGDDFYDCRVEHWGLEKPLFKHWEPQMPTPLPDTTGMLVCALGLALGLVGFLVGIVLIITGSRLSRAPRAAVDGSAPGTS
SYRNARNTTAPQ
>gi|390196878|gb|AFL70534.1| MHC class II protein, partial [Macaca fascicularis]
ADHVSTYASFVQTHRPTGEFMFEFDEDEQFYVDLDKKETVWHLEEFGRAFSFEAQGGLANIAALNHNLNILIQRSNHTQA
ANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGEPVTEGVAESLFLPRTDYRLHKFHYLTFVPSAEDFYD
CRVEHWGLDQPLLKHW
>gi|585172380|ref|XP_006738141.1| PREDICTED: HLA class II histocompatibility antigen, DP alpha 1 chain-like [Leptonychotes weddellii]
MHLEDIRSRTQVMILGAIALAALLSPHGTGAVRVGHVSMYAEFVQTHRPSGEYMFEFDEDEQFYVDLDKKETVWHLPEFI
HAFDYDAWRGIADIVGSKKNLTTLIQWSNHTRATNEPSEVTVFPKEPVELGQPNTLICHVDKFFPPVLNVTWLHNGQMVT
EGIAETIFLPSTEFRFHKFHYLTFLPTAEDVYDCKVEHWGLDQPLLQHWEAQEPIWVRETKETVVCVLGLVAGVVGIITG
ITVLKTGRSGHDSGFTYCAQLLPPSTFIIALLGLTVSGVSEHCGELKRTDPNECHSHSMVNAISLARTCSAIEQVLSSVL
KI
>gi|390196866|gb|AFL70528.1| MHC class II protein, partial [Macaca fascicularis]
ADHVSTYASFVQTHRPTGEFMFEFDEDEQFYVDLDKKETVWHLEEFGRAFSFEAQGGLANIAALNHNLNILIQRSNHTKA
ANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGEPVTEGVAESLFLPRTDYRLHKFHYLTFVPSAEDFYD
CRVEHWGLDQPLLKHW
>gi|390196898|gb|AFL70544.1| MHC class II protein, partial [Macaca fascicularis]
ADHVSTYASFVQTHRPTGEYMFEFDEDEQFYVDLDKKETVWHLEEFGRAFSFEAQGGLANIAALNHNLNILIQRSNHTKA
ANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGEPVTEGVAESLFLPRTDYRLHKFHYLTFVPSAEDFYD
CRVEHWGLDQPLLKHW
>gi|390196888|gb|AFL70539.1| MHC class II protein, partial [Macaca fascicularis]
ADHVSTYASFVQTHRPTGEFMFEFDEDEMFYVDLDKKETVWHLEEFGRALFLEAQGGLANIAALNHNLNTLIQRSNHTQA
ANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGEPVTEGVAESLFLPRTDYRLHKFHYLTFVPSAEDFYD
CRVEHWGLDQPLLKHW
>gi|479336268|gb|AGJ74710.1| MHC class II antigen, partial [Macaca mulatta]
LLSLRGAGAIKADHVLTFAAFVQTHRPTGEYMYELDEDEIFFVDLDKKETVWHLEEFGRAFSFEAQGGLANIAILNNNLN
VTIQLSNHTQATNDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGQPVTEGVTESLFLPRTDYSFHKFHYL
TFVPSAEDYYDCRVEHWGLDQPLLKHWEAQEP
>gi|507617707|ref|XP_004624312.1| PREDICTED: HLA class II histocompatibility antigen, DP alpha 1 chain-like [Octodon degus]
MFQNKAAILSTLPLAFLLGLQGAGAIGADHVAIFTCFAQTRSPSGELMVEIDGDELLYVDMDKKAPVWRLPEFGRAITVD
VEPWIPMIGIMKMNLNTLIKRSNHTQAPSDPPEVTVFPKEPVELGKLNILICHVDRFFPPVLNVTWLKNGQPVTEGVSES
VFLPRTDYHFHQFHYLTFLPSTEDVYDCKVEHWGLDEPYLTHWEPQEPNQVMETTETLVCALGLLVVLVGITVGPVIIIR
ALCSSRVPQTQGPL
>gi|472376617|ref|XP_004407743.1| PREDICTED: HLA class II histocompatibility antigen, DP alpha 1 chain-like, partial [Odobenus rosmarus divergens]
MILGAIALAALLSPHGTGAVRVGHVSMYAEFVQTHRPSGECIFEFDEDEQFYVDLDKETLWHLPEFIHAFDYDAWRGIAD
IVVAKKNLNTLIQRSNHTRATNEAPEVTVLPKEPVELGQPNTLICHVDKFFPPVLNVTWLRNGQMVTEGIAETIFLPSTE
FRFHKFHYLTFLPMAEDVYDCKVEHWGLDQPLLQHWEAQEPIQVPEMKDSVVCVLGLVAGVVRIITGIIVLKTRRSGHD
>gi|226379|prf||1509281A MHC II alpha
GHVSTYVQFVQTHRPSGEYMFEFDEDEQFYVDLDKKETIWHLPEFIHAFSFDAWRGIADIVTAKKNLNTLIGRSNHTRAT
NEPPEVGVFPKEPVELGQPNTLICHVDKFFPSVLNVTWLCNGQTVTKVAESIFLPSTEFRFHKFHYLTFIPTAEDVYDCK
VEHRGLDQPLLQHWEAQEPIDVPETMETVVCALGLVVGVAGIITGTIILKTRRPDHPWVQGPL
>gi|625206759|ref|XP_007644595.1| PREDICTED: RLA class II histocompatibility antigen, DP alpha-1 chain [Cricetulus griseus]
MFQTKAEALGASFLAFLLSLPGSGAIKADHVAMYDIFAQTQKPSGDCVYEFDGDELFYVDLDREETVWGLREFSTVYGFD
AQGALPYILSLKDNLRALIQRHNVTQVPSEPPEVTVFPKNPVELGQPNVLICHIDRFFPPVLNVTWLRNGQLVTEGTSET
VFLPSTELRFQKFHYLTFIPTAKDVYDCRVEHWSLGQPSLSHWEMPEPLQVTETMETVVCALGLVVALVGIVIGSALIIG
ALHSSHDPRGPGTRVSDCAGEDVRMQSTTARESTPAAQKGGRIHIGGADTDLISRCSGFLQEHFDASFQSVPKNNFSCF
>gi|444519080|gb|ELV12563.1| HLA class II histocompatibility antigen, DP alpha 1 chain [Tupaia chinensis]
MFQTKAVMLSALSLAYLLSLQGAGAIQVDHVSTYLTFTQTHRPSGEFMFQFDGDEMFYVDQDKRETIWSLEEFGRVYSYE
VQGGLQNLAVAKGNLNTLMQCSNHTQASNAKGHRLTRSVSFQTPPEVTVFPKEPVELGQPNILICHVDKFFPPVLNLNIT
WLRNGQPVTEGVAETIFLPSTEFLFHKFHYLPFLPMAEDVYDCKVEHWGLDRPLLEHWEAQEPTQLPETMEAVVCALGLA
VGLVGVIAVSLALQARPSDSIPGLRGPHESSQRGEFQGHSGPEEGACYGLSVGTSNISARAL
>gi|625262964|ref|XP_007622915.1| PREDICTED: RLA class II histocompatibility antigen, DP alpha-1 chain [Cricetulus griseus]
MFQTKAEALGASFLAFLLGLPGSGAIKADHVAMYDIFAQTQKPSGDCVYEFDGDELFYVDLDREETVWGLREFSTVYGFD
AQGALPYILSLKDNLRALIQRHNVTQVPSEPPEVTVFPKNPVELGQPNVLICHIDRFFPPVLNVTWLRNGQLVTEGTSET
VFLPSTELRFQKFHYLTFIPTAKDVYDCRVEHWSLGQPSLSHWEMPEPLQVTETMETVVCALGLVVALVGIVIGSALIIG
ALHSSHDPRGPGTRVSDCAGEDVRMQSTTARESTPAAQKGGRIHIGGADTDLISRCSGFLQEHFDASFQSVPKNNFSCF
>gi|390196882|gb|AFL70536.1| MHC class II protein, partial [Macaca fascicularis]
ADHVLTFTTFVQTHRPTGEFMYELDEDEIFFVDLDKKETIWHLEEFGRAFSFEAQGGLANIAISNNNLNVTIQLSNHTQA
TNDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGQPVTEGVTESLFLPRTDYSFHKFHYLTFVPSAEDYYD
CRVEHWGLDQPLLKHW
>gi|390196884|gb|AFL70537.1| MHC class II protein, partial [Macaca fascicularis]
ADHVLTFTTFVQTHRPTGEYMYELDEDEIFFVDLDKKETIWHLEEFGRAFSFEAQGGLANIAISNNNLNVTIQLSNHTQA
TNDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGQPVTEGVTESLFLPRTDYSFHKFHYLTFVPSAEDYYD
CRVEHWGLDQPLLKHW
>gi|390196892|gb|AFL70541.1| MHC class II protein, partial [Macaca fascicularis]
ADHVSTFAMFVQTHRPTGEYMSEFDEDEMFYVDLDKKETVWHLEEFGRALFLDAQGGLANIAALNNHLNIMIQRSNHSQA
ANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGELVTKGVTESLFLPRTDYRLHKFHYLTFVPSAEDYYD
CRVEHWGLDQPLLKHW
>gi|390196864|gb|AFL70527.1| MHC class II protein, partial [Macaca fascicularis]
ADHVSTYAMFVQTHRPTGEYMFEFDEDEMFYVDLDKKETVWHLEEFGRAFSFEAQGGLASIAILNNNLNNTIQRSNYTQA
ANDPPEVTVFPKEPVVLGQPNTLICHIDKFFPPVLNVTWLCNGQPVTEGVAESLFLPRTDYSFHKFHYLTFVPSAEDYYD
CRVEHWGLDQPLLKHW
>gi|390196896|gb|AFL70543.1| MHC class II protein, partial [Macaca fascicularis]
ADHVSTFAMFVQTHRPTGEYMSEFDEDEMLYVDLDKKETVWHLEEFGRALFLDAQGGLANIAALNNHLNIMIQRSNHSQA
ANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGELVTKGVTESLFLPRTDYRLHKFHYLTFVPSAEDYYD
CRVEHWGLDQPLLKHW
>gi|537249669|gb|ERE88226.1| HLA class II histocompatibility antigen, DO alpha chain-like protein [Cricetulus griseus]
MFQTKAEALGASFLAFLLSLPGSGAIKADHVAMYDIFAQTQKPSGDCVYEFDGDELFYVDLDREETVWGLREFSTVYGFD
AQGALPYILSLKDNLRALIQRHNVTQVPSEPPEVTVFPKNPVELGQPNVLICHIDRFFPPVLNVTWLRNGQLVTEGTSET
VFLPSTELRFQKFHYLTFIPTAKDVYDCRVEHWSLGQPSLSHWEMPEPLQVTETMETVVCALGLVVALVGIVIGSALIIG
ALHSSHDPRGPGTRVSDCADVAKAPPPTPSVMVLPVELVLAFHTLISFLNPQGVRAIKADHMGSYGPAFYQSYDASGQFT
HEFDGEQIFSVDLKNGEVVWRLPEFGDTQYSNFQSGLASIAMIRAHLDILVERSNRTRAISVPPRVTVLPKSPVELGKPN
VLICIVDDIFPPVINVTWLRNNQPVTKGVAQTSFYTQPNHRFRKFHYLTFVPWAEDMYDCRVEHWGLEAPLLQHWEPQVL
TPPPDTTETLVCGLGLALGFMGFLLGTALIVTGLSPRSIRRCRSPGSLRVKGGGHECVGEGKSDSVKSRGEKRGG
>gi|390196886|gb|AFL70538.1| MHC class II protein, partial [Macaca fascicularis]
ADHVSTFAMFVQTHRPTGEYMSEFDEDEMLYVDLDKKETVWHLEEFGRALFLDAQGGLANIAALNNHLNIMIQRSNHSQA
ANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGKLVTKGVTESLFLPRTDYRLHKFHYLTFVPSAEDYYD
CRVEHWGLDQPLLKHW
>gi|390196862|gb|AFL70526.1| MHC class II protein, partial [Macaca fascicularis]
ADHVSTFAMFVQTHRPTGEYMSEFDEDEMLYVDLDKKETVWHLEEFGRALFLDAQGVLANIAALNNHLNIMIQRSNHSQA
ANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGKLVTKGVTESLFLPRTDYRLHKFHYLTFVPSAEDYYD
CRVEHWGLDQPLLKHW
>gi|337298500|ref|NP_001229645.1| MHC class II DR alpha precursor [Ornithorhynchus anatinus] >gi|620987395|ref|XP_007654254.1| PREDICTED: MHC class II DR alpha isoform X1 [Ornithorhynchus anatinus] >gi|156602024|gb|ABU86899.1| MHC class II antigen [Ornithorhynchus anatinus]
MAPTTALALRVLSLASLLATHCTRAVKWEHRIIQAEFSQTHSPTGEFMFEFDGDEIFHVDLDRKETVWRLADFSNYASFE
AQGGLANLAVDKANMDILIKRSNHTPATNVAPEVTVFPENPVEMGQPNILICFVDKFSPPVVNISWLRNGQPWSKGASET
DFYPRTDHSFRKFHYLPFIPSANDFYDCKVEHWGLEEPLLRHWEPKVPSPLTETKETLVCALGLAVGLVGIIVGTILIVR
GLRSGTAPRPQGPL
>gi|122203|sp|P20755.1|HA2P_RABIT RecName: Full=RLA class II histocompatibility antigen, DP alpha-1 chain; AltName: Full=D10 haplotype >gi|165492|gb|AAA31396.1| MHC DP-alpha-1 cell surface glycoprotein (AA at 42), partial [Oryctolagus cuniculus]
EHVSVFVIFAQTHEPSGECMFEFDEDEVFHVDLDKKQAIWYLPEFGRMFSVEAQGGLANIAAAKSNLNACIQHSNHTQAP
NEPPEVIVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLRNGQPVTEGVSETVFLASTEFRFRKFHYLAFVPSAADVYDC
RVEHWGLDAPLLTHWEAQEPIQMPETTETVVCALGLVVGLAGVVVGIVLITKALRSSPDPRARRPL
>gi|444517918|gb|ELV11862.1| HLA class II histocompatibility antigen, DP alpha 1 chain [Tupaia chinensis]
MFQFDGDEVFYVDLDKKETIWHMEEFGHAFSYEAQDGLKNLAVAKENLIIMIRRSNHTQASNEPPEVTVFPKKSVELGQP
NVLICHVDKFFPPVLNVTWLRNGQPVTDGVTESLFLPSTEFRFHKFLYLTFVPSAEDVYDCRVEHWGLEEPLLMHWEAQE
SILVPETTETVVCALGLVLGLVGIIVSTVFIIKDLHSSRNPWVQGPL
>gi|390196870|gb|AFL70530.1| MHC class II protein, partial [Macaca fascicularis]
ADHVSTYAMFVQTHRPTGEFMFEFDEDEMFYVDLDKKETVWHLEEFGRAFSFEAQGGLANIAILNNNLNITIQRSNYTQA
ANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGEPVTEGVAESLFLPRTDYSFHKFHYLTFVPSAEDYYD
CRVEHWGLDQPLLKHW
>gi|562865933|ref|XP_006161142.1| PREDICTED: HLA class II histocompatibility antigen, DP alpha 1 chain-like, partial [Tupaia chinensis]
DHVSTYAEFVQTHRPSAEYMFEFDEDKQFYVDLDKKETVWPLPEFIHAFDYDAQRGIADIVMTRGNLITMIQWSRHTQAI
HEPPEVTVFPKEPVELGQPNILICHVDKFFPPVLNITWLRNGQPVTEGVAETIFLPSTEFRFHKFHYLPFLPTAEDVYDC
KVEHWGLDRPLLEHWEAQEPIQLPEMMETMVCVLGLAVGLVGVIAVTIILQTRLT
>gi|390196858|gb|AFL70524.1| MHC class II protein, partial [Macaca fascicularis] >gi|390196860|gb|AFL70525.1| MHC class II protein, partial [Macaca fascicularis]
ADHVSTYAMFVQTHRPTGEFMFEFDEDEQFYVDLDKKETVWHLEEFGRAFSFEAQGGLANIAILNNNLNITIQRSNYTQA
ANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGEPVTEGVAESLFLPRTDYSFHKFHYLTFVPSAEDYYD
CRVEHWGLDQPLLKHW
>gi|532035158|ref|XP_005360478.1| PREDICTED: HLA class II histocompatibility antigen, DP alpha 1 chain-like [Microtus ochrogaster]
MFQSKAEVLRASFLAFLLSLPGSAAITADHVAMYDIFAQMQTPSGDCMYEFDSDEQFYVDLDREETVWGLSEFSTVYGFD
AQGALPYIARLKSNLRALIQRHNITQVPSEPPEVTVFPKNPVELGQPNVLICHLDRFFPPVLNVTWLRNGKLVTEGTSET
VFLPSTELRFHKFHYLTFVPTAEDVYDCRVEHWGLDQPSLTHWEMQEPLQAAETMETVVCVLGLVVGLVGIVIGSVFIVR
ALHSGHDPRIQGPL
>gi|390196850|gb|AFL70520.1| MHC class II protein, partial [Macaca fascicularis] >gi|390196854|gb|AFL70522.1| MHC class II protein, partial [Macaca fascicularis] >gi|390196856|gb|AFL70523.1| MHC class II protein, partial [Macaca fascicularis]
ADHVSTYALFVQTHRPTGEFMFEFDEDEQFYVDLDKKETVWHLEEFGRAFSFEAQGGLANIAILNNNLNITIQRSNYTQA
ANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGEPVTEGVAESLFLPRTDYSFHKFHYLTFVPSAEDYYD
CRVEHWGLDQPLLKHW
>gi|395537422|ref|XP_003770700.1| PREDICTED: mamu class II histocompatibility antigen, DR alpha chain-like [Sarcophilus harrisii]
MMPNKALILGTFTLAMLLNPWGARAIKENHVIIQAEFYQTHNPLGEFMFDFDGDEIFHVDLDKRETVWRLPDFSKFASFE
AQGALANLAVDKANLEIMIKRSNNTPDTNVPPEVTVFPKSPAEMDQPNVLICFIDKFSPPVLNVTWLRNGQPITDGVFET
VFLPRPDHAFRKFHYLTFIPSANDYYDCKVDHWGLEQPLMKHWEPEIRTPLPETTETVVCALGLAIGLVGIVVGTILIIK
GMKSSNASRGGPRGPL
>gi|390196848|gb|AFL70519.1| MHC class II protein, partial [Macaca fascicularis] >gi|390196852|gb|AFL70521.1| MHC class II protein, partial [Macaca fascicularis]
ADHVSTYAAFVQTHRPTGEYMFEFDEDEQFYVDLDKKETVWHLEEFGRAFSFEAQGGLANIAILNNNLNITIQRSNYTQA
ANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGQPATEGVAESLFLPRTDYSFHKFHYLTFVPSAEDYYD
CRVEHWGLDQPLLKHW
>gi|524974216|ref|XP_005086948.1| PREDICTED: HLA class II histocompatibility antigen, DP alpha 1 chain-like [Mesocricetus auratus]
MFQTKAQALAASFLAFMLSLPGSGAIKADHVAMYDIFAQTQKPSGDCMYEFDGDEQFYVDLDREETVWGLREFSTVYSFE
AQGALSYILSLKDNLRALLQRHNITRVPSEPPEVTVFPKNPVELGQPNILICHVDRFFPPMLNVTWLRNGHRVTEGTSET
VFLPSTELRFQKFHYLTFIPTAEDVYNCRVEHWGLGQPSLGHWEMPETLQVTETMENVVCALGLLVALVGIVIGGVLIAG
ALRPDQDPLPGVPGTPVSDCAGDEVHACCAERRERSRR
>gi|390196900|gb|AFL70545.1| MHC class II protein, partial [Macaca fascicularis]
ADHVSTYAMFVQTHRPTGEFMFEFDEDEMFYVDLDKKETVWHLEEFGRAFSFEAQGGLANIAALNNNLNTLIQLSNHTPA
ANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGEPVTEGVAESLFLPRTDYRLHKFHYLTFVPSAEDFYD
CRVEHWGLDQPLLKHW
>gi|671001726|ref|XP_008691735.1| PREDICTED: LOW QUALITY PROTEIN: RLA class II histocompatibility antigen, DP alpha-1 chain [Ursus maritimus]
MLLLFVSCVLFTFLHNHLFSNLPFSNLVSVYAEFVQTRRPSGEYMFEFDGDEQFYVDLDKKETVWQLPEFIHAFDFDAWR
HVADIVTAKKNLNILIQRSNHTRATNKPPEVTVFPKEPVELGQPNTLIXHVDKFFPPVLNVTWLCNGQIVTKGITETVFL
PTTEFRFHKFHYLTFLPTAEDVYDCKVKHWGLDQLLLQHWGAQELIQVPETKETVVCVLGLVAGVAGILTGIVVLKTRRP
DHPQVQGLL
>gi|672085585|ref|XP_006255978.2| PREDICTED: RT1 class II, locus Ha isoform X1 [Rattus norvegicus] >gi|672085864|ref|XP_003751979.3| PREDICTED: RLA class II histocompatibility antigen, DP alpha-1 chain-like [Rattus norvegicus]
MQSGFRTRFQSFRCPHSPSVPHYCLVITVISRRFPDLCSEERMFQTKAEALRASFLAFLLSLPGSGAIKAEHVATYDIFV
QTQHPSGECMYAFDGDEQFYVDLDREETVWDLPEFSKVYAFDAQEALPYIDSLKNNLRALIQRYNVTQDPSEPPEVTVFP
KNPVELGQPNVLICHIDRLFPPVLNVTWLRNGQPVTEGTSETVFLASTELRFHKFHYLTFIPTAQDVYDCRVEHWSLDQP
SLSHWEMQEPVQVSETMETTVCALGLVVGLVGSVVGSALIVRAPHGGHNPRTQEPL
>gi|602298|gb|AAA85824.1| MHC class II DR alpha protein precursor [Macropus rufogriseus]
MTSNKSLILGAFILSVLLGPWGARAIKENHVIIQAEFYQTHEPSGEFMFDFDGDEIFHVDLNKKETVWRLPDFSKFASFE
AQGALANLAVDKANLEIMMKRSNNTPDTNVGPEVTVFPKGPVELGQPNILVCFIDKFSPPVLTVTWLHNGVPITDGVFET
VFLPRSDHAFRKFHYLTFIPSATDYYDCKVEHWGLEQPVVKHWEPEVRTPLPETTETVVCALGLAIGLVGIIVGTILIIK
GMRSNNTSRGGSRGPL
>gi|57012344|ref|NP_001008848.1| RT1 class II, locus Ha precursor [Rattus norvegicus] >gi|46237554|emb|CAE83935.1| RT1 class II, H alpha [Rattus norvegicus]
MFQTKAEALRASFLAFLLSLPGSGAIKAEHVATYDIFVQTQHPSGECMYAFDGDEQFYVDLDREETVWDLPEFSKVYAFD
AQEALPYIDSLKNNLRALIQRYNVTQDPSEPPEVTVFPKNPVELGQPNVLICHIDRLFPPVLNVTWLRNGQPVTEGTSET
VFLASTELRFHKFHYLTFIPTAQDVYDCRVEHWSLDQPSLSHWEMQEPVQVSETMETTVCALGLVVGLVGSVVGSALIVR
APHGGHNPRTQEPL
>gi|390196894|gb|AFL70542.1| MHC class II protein, partial [Macaca fascicularis]
ADHVSTYALFVQTHRPTGEYMSEFDEDEMFYVDLDKKETVWHLEEFGRALFLEAQGGLANIAALNNNLNIMIQRSNHTQA
ANDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGEPVTEGVAESLFLPRTDYRLHKFHYLTFVPSAEDYYD
CRVEHWGLDQPLLKHW
>gi|157862705|gb|ABV90473.1| MHC class II alpha domain [Ovis aries] >gi|573008329|emb|CDL68738.1| MHC class II DQA [Ovis aries]
MILNRALILGALALTTMMSPSGSEDIVADHIGTYGVNIYQTYGPSGYYTHEFDGDEEFYVDLEKRETVWRLPEFSKFTSF
DPQGALRNIATVKHNLEILIQRSNSTAATNKVPEVTVFSKSPVMLGQPNTLICHVDNIFPPVINITWLRNGHSVTEGVSE
TSFLIKSDYSFLKINYLTFLPSDDDVYDCKVEHWGLDEPLLKHWEPEIPVPMSELTETVVCALGLTVGLVGIVVGTVLII
RGLRSGGPSRHQGPL
>gi|1245728|gb|AAB35454.1| major histocompatibility complex class II alpha chain [Rattus sp.] >gi|1339967|dbj|BAA07637.1| RT1.Ha [Rattus norvegicus]
MFQTKAEALRASFLAFLLSLPGSGAIKAEHVATYDIFVQTQHPSGECMYAFDGDEQFYVDLDREETVWDLPEFSKVYAFD
AQEALPYIDSLKNNLRALIQRYNVTQDPSEPPEVTVFPKNPVELGQPNVLICHIDRLFPPVLNVTWLRNGQPVTEGTSET
VFLASTELRFHKFHYLTFIPTAQDVYDCRVEHWSLDQPSLSHWEMQEPVQVSETMETTVCALGLVVGLVGSVVGSALIVR
VPDGGHNPRTQEPL
>gi|301785764|ref|XP_002928296.1| PREDICTED: HLA class II histocompatibility antigen, DR alpha chain-like [Ailuropoda melanoleuca]
MAVSGVPVLGFFIMALLMGPQESQAIKEDHVIIQAEFYMTPDPSGEYMFDFDGDEIFHVDLEKKETVWRLEEFGRFASFE
AQGALANIAVDKANLDIMIKRSNHTPNTNVPPEVTVLSNTPVELGEPNTLICFIDKFSPPVINVTWLRNGNPVTTGVSET
VFLPREDHLFRKFHYLPFLPSADDVYDCKVEHWGLDKPLLKHWEFEAPTPLPETTENVVCALGLVVGLVGIIVGTVFIIK
GMRKVNAGERRGPL
>gi|504158019|ref|XP_004590514.1| PREDICTED: HLA class II histocompatibility antigen, DP alpha 1 chain-like [Ochotona princeps]
MHLQGFRDQTRAMILRALALAILLSPHGTRAVRVDHVSTYAELVQTHRPSGEYMFEFDEDEQFYVDLDNKETEWHLQEFI
HAFDFDGRRGIADIVMAKKNLNTLIQRSKHTRATNEAPEVSVFPKEPVELDQPNTLICHIDKFFPPVLNITWLRNGQLVT
EGVAESIFLPSLEFRFHKFHYLTCLPMADDVYDCKVEHWGLERPPLMHWEPQEPACVPETTETVLCSLGLVVGLVGVAIG
TIILRTK
>gi|2266963|emb|CAA74344.1| MHC class II alpha subunit [Bos indicus]
VLNRALILGALTLTTMTSLCGGEDIVADHIGTYGADFYQSHGPSGQYIHEFDGDELFYVDLGKKETVWQLPMFGELTSFE
AQDALNEIAKAKHTLDVLTKRSNFTPVINEVPEVTVFSKSPMMLGQPNTLICHVDNIFPPVINITWLRNGHAVTEGVSET
SFLPKSDYSFLKIGYLTFLPSDDDVYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLTVGLVGIVVGTVLIIR
GLRSGGASRHQGSL
>gi|671001658|ref|XP_008691695.1| PREDICTED: HLA class II histocompatibility antigen, DR alpha chain [Ursus maritimus]
MAISGVPVLGFFIMALLMGPQESRAIKEDHVIIQAEFYMTPDPSGEFMFDFDGDEIFHVDLEKKETVWRLEEFGRFASFE
AQGALANIAVDKANLDIMIKRSNHTPNTNVPPEVTVLSNTPVELGEPNTLICFINKFSPPVINVTWLRNGNPVTTGVSET
VFLPREDHLFRKFHYLPFLPSADDVYDCKVEHWGLDKPLLKHWEFEAPTPFPETTENVVCALGLVVGLVGIIVGTVFIIK
GMRKVNAGERRGPL
>gi|548534290|ref|XP_005701637.1| PREDICTED: SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like isoform X1 [Capra hircus] >gi|548534301|ref|XP_005701638.1| PREDICTED: SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like isoform X2 [Capra hircus] >gi|548534307|ref|XP_005701639.1| PREDICTED: SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like isoform X3 [Capra hircus]
MILNRALILGALALTAMMSPSGSEDIVADHIGTYGISIYQTYGPSGYYTHEFDGDEEFYVDLEKRETVWRLPEFSKFASF
DPQGALRNIATIKHNLEVLIQRSNSTAATNKVPEVTVFSKSPVMLGQPNTLICHVDNIFPPVISITWLRNGHSVTEGVSE
TSFLIKSDYSFLKINYLTFLPSDDDVYDCKVEHWGLDEPLLKHWEPEIPVPMSELTETVVCALGLTVGLVGIVLGTVLII
RGLRSGGPSRHQGPL
>gi|2304949|gb|AAB65589.1| MHC class II antigen [Felis catus]
MTINGVLVLGFLIVAFLMCPQESGAIKEEHVIIQAEFYLKPDSSGEFMFDFDGDEIFHVDMEKKETVWRLEEFGRFASFE
AQGALANIAVDKANLDILIKRSNNTPNTNEPPEVTVLSNSPVELGEPNILICFIDKFSPPVINVTWLRNGKPVTTGVSET
VFLPREDHLFRKFHYLPFLPSAEDVYDCKVEHWGLDEPLLKHWEFDAPTPLPETTENVVCALGLVVGLVGIIVGTIFIIK
GMRKVNAGERRGAL
>gi|478500083|ref|XP_004424365.1| PREDICTED: mamu class II histocompatibility antigen, DR alpha chain-like isoform 1 [Ceratotherium simum simum]
MSKEQEEALLTPIKALKKKMALSGVPMLGFFITALLMRLQESEAIKEEHVIIQAEFYLTPDPTGEYMFDFDGDEIFHVDM
EKKETVWRLEEFGRFATFEAQGALANIAVDKANLEIMIKRSNHTPDTSVPPEVTVLPNKPVELGEPNILICFIDKFSPPV
VNVTWLQNGKPVTVGVSETVFLPREDQLFRKFHYLPFLPSTEDVYDCKVEHWGLDEPLLKHWEFEAPTPLPETTENVVCA
LGLVVGLVGIIVGTIFIIKGVRKGNVVEHRGPL
>gi|478500085|ref|XP_004424366.1| PREDICTED: mamu class II histocompatibility antigen, DR alpha chain-like isoform 2 [Ceratotherium simum simum]
MALSGVPMLGFFITALLMRLQESEAIKEEHVIIQAEFYLTPDPTGEYMFDFDGDEIFHVDMEKKETVWRLEEFGRFATFE
AQGALANIAVDKANLEIMIKRSNHTPDTSVPPEVTVLPNKPVELGEPNILICFIDKFSPPVVNVTWLQNGKPVTVGVSET
VFLPREDQLFRKFHYLPFLPSTEDVYDCKVEHWGLDEPLLKHWEFEAPTPLPETTENVVCALGLVVGLVGIIVGTIFIIK
GVRKGNVVEHRGPL
>gi|113205974|ref|NP_001013619.3| major histocompatibility complex, class II, DQ alpha, type 1 precursor [Bos taurus] >gi|109658339|gb|AAI18361.1| Histocompatibility complex, class II, DQ alpha, type 1 [Bos taurus]
MVLNRALILGALTLTTMTSLCGGEDIVADHIGTYGADFYQSHGPSGQYIHEFDGDELFYVDLGKKETVWQLPMFGELTSF
EAQDALNEIAKAKHTLDVLTKRSNFTPVINEVPEVTVFSKSPMMLGQPNTLICHVDNIFPPVINITWLRNGHAVTEGVSE
TSFLPKSDYSFLKIGYLTFLPSDDDVYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLTVGLVGIVVGTVLII
RGLRSGGASRHQGPL
>gi|472382609|ref|XP_004410689.1| PREDICTED: mamu class II histocompatibility antigen, DR alpha chain-like [Odobenus rosmarus divergens]
MAISGVPVLGFFIMALLMGPQESWAIKEDHVIIQAEFYLTPDPSGEFMFDFDGDEIFHVDMEKKETVWRLEEFGRFASFE
AQGALANIAVDKANLDIMIKRSNHTPNTNVPPEVTVLSNSPVELGEPNTLICFIDKFSPPVINVTWLRNGNPVTTGVSET
VFLPREDHLFRKFHYLPFLPSADDVYDCKVEHWGLDKPLLKHWEFEAPTPLPETKENVVCALGLVVGLVGIIVGTIFIIK
GMRKVNAGERRGPL
>gi|42794356|gb|AAS45653.1| MHC class II antigen [Zalophus californianus]
FFIMALLMGPQESWAIKEDHVIIQAEFYLTPDPSGEFMFDFDGDEIFHVDMEKKETVWRLEEFGRFASFEAQGALANIAV
DKANLDIMIKRSNHTPNTNVPPEVTVLSNTPVELGEPNTLICFIDKFSPPVINVTWLRNGNPVTTGVSETVFLPREDHLF
RKFHYLPFLPSADDVYDCKVEHWGLDKPLLKHWEFEAPTPLPETKENVVCALGLVVGLVGIIVGTIFIIKGMRKVNAGER
RGPL
>gi|42794350|gb|AAS45650.1| MHC class II antigen [Zalophus californianus]
FFIMALLMGPQESWAIKEDHVIIQAEFYLTPDPSGEFMFDFDGDEIFHVDMEKKETVWRLEEFGRFASFEAQGALANIAV
DKANLDIMIKRSNHTPNTNVPPEVTVLSNTPVELGEPNTLICFIDKFSPPVINVTWLRNGNPVTTGVSETVFLPREDHLF
RKFHYLPFLPSADDVYDCKVEHWGLDKPLLKHWEFEAPTPLPETKENVVCALGLVVGLVGIIVGTIFIIKGMRKVNAGEH
RGPL
>gi|410989813|ref|XP_004001152.1| PREDICTED: HLA class II histocompatibility antigen, DR alpha chain-like [Felis catus]
MAINGVLVLGFLIVAFLMCPQESGAIKEEHVIIQAEFYLKPDSSGEFMFDFDGDEIFHVDMEKKETVWRLEEFGRFASFE
AQGALANIAVDKANLDILIKRSNNTPNTNEPPEVTVLSNSPVELGEPNILICFIDKFSSPVINVTWLRNGKPVTTGVSET
VFLPREDHLFRKFHYLPFLPSAEDVYDCKVEHWGLDEPLLKHWEFDAPTPLPETTENVVCALGLVVGLVGIIVGTIFIIK
GMRKVNAGERRGPL
>gi|560908542|ref|XP_006180586.1| PREDICTED: mamu class II histocompatibility antigen, DR alpha chain-like [Camelus ferus]
MVMTGVPVLGVFITVLMRLQGSWAIKEEHVIIQAEFYLNPDKSGEFMFDFDGDEIFHVDLEKKETVWRLEEFGRFASFEA
QGALANIAVDKANLDIMIKRSNHTPNTNVPPEVTVLPNTRVELGEPNTLICFIDKFSPPVVKVTWLRNGKPVTTGVSETV
FLPRDDHLFRKFHYLTFLPSTEDVYDCKVEHWGLEEPLLKHWEYEAPVPLPETTENTVCALGLVVALAGIIVGTALIIKG
VRKGNAAERRGPL
>gi|573008351|emb|CDL68749.1| MHC class II DQA [Ovis aries]
MVLNRALILGVLALTTMTSPCGGEDIVADHVGTYGTDFNQSHGPSGEYIHEFDGDELFYVDLGKKETVWRLPMFGELTSF
DPQGALSNIAIAKHNLNILTKRYNFTPVINEVPEVTVFSKSPVMLGQPNTLICHVDKIFPPVINITWLWNGHAVTEHVSE
TSFLLRSDYSYLKISYLTFLPSDDDVYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLTVGLVGIVVGTVLII
RGLRSSGTSRHQGPL
>gi|591335296|ref|XP_007093322.1| PREDICTED: mamu class II histocompatibility antigen, DR alpha chain-like isoform X1 [Panthera tigris altaica]
MAVSRAPVLGFFIMALLMGPQESLAIKEEHVIIQAEFYMKPDSSGEFMFDFDGDEIFHVDMEKKETVWRLEEFGRFASFE
AQGALANIAVDKANLDILIKRSNNTPNTNEPPEVTVLSNSPVELGEPNILICFIDKFSPPVINVTWLRNGKPVTTGVSET
VFLPREDHLFRKFHYLPFLPSVEDVYDCKVEHWGLDEPLLKHWEFDAPTPLPETTENVVCALGLVVGLVGIIVGTIFIIK
GMRKVNAGERRGPL
>gi|585168467|ref|XP_006736305.1| PREDICTED: HLA class II histocompatibility antigen, DR alpha chain-like [Leptonychotes weddellii]
MAVSRVPVLGFFIMALLTGPQESWAIKEDHVIIQAEFYLTPDQSGEFMFDFDGDEIFHVDMGKKETVWRLEEFGHFASFE
AQGALANIAVDKANLDIMIKRSNHTPNTNVPPEVTVLSNTPVELGEPNTLICFIDKFSPPVINVTWLRNGNPVTTGVSET
VFLPREDHLFRKFHYLPFLPSADDVYDCKVEHWGLDKPLLKHWEFEAPTPLPETTENVVCALGLVVGLVGIIVGTIFIIK
GMRKVNAGERRGPL
>gi|113197131|gb|ABI31824.1| MHC class II antigen [Sus scrofa]
MVPGRVLMWGALALTAVMSACGGEDIAADHVASYGLNVYQSYGPSGYYTHEFDGDEQFYVDLEKKETVWQLPLFSKFTSF
DPQGALRNIATAKHNLNTLIKRSNNTAAVNQVPEVTVFPKSPVMLGQPNTLICHVDNIFPPVINITWLKNGHSVTEGFSE
TSFLSKNDHSFLKISYLTFLPSDDDFYDCKVEHWGLDKPLLKHWEPEIPAPMSELTETVVCALGLIVGLVGIVVGTVFII
QGLRSGGPSRHQGSL
>gi|573008337|emb|CDL68742.1| MHC class II DQA [Ovis aries]
MVLNRALILGALALTTMMSPSGGEDIVADHVGIYGADFYQSHGPSGQYTHEFDGDELFYVDLGKKETVWRLPMFGEFTSF
DPQGALSEIATAKQNLDIMIKRSNFTPVINEVPEVTVFSKSPVMLGQPNTLICHVDNIFPPVINITWLKNGHAVTEGVSE
TSFLPKDDHSFLKIGYLTFLPSDDDVYDCKVEHWGLEEPLLKHWEPEIPAPMSELTETVVCALGLTVGLVGIVVGTIFII
QGLRSGGASRHQGPL
>gi|42794352|gb|AAS45651.1| MHC class II antigen [Zalophus californianus]
FFIMALLMGPQESWAIKEDHVIIQAEFYLTPDPSGEFMFDFDGDEIFHVDMEKKETVWRLEEFGRFASFEAQGALANIAV
DRANLDIVIKRSNHTPNTNVPPEVTVLSNTPVELGEPNTLICFIDKFSPPVINVTWLRNGNPVTTGVSETVFLPREDHLF
RKFHYLPFLPSADDVYDCKVEHWGSDKPLLKHWEFEAPTPLPETKENVVCALGLVVGLVGIIVGTIFIIKGMRKVNAGEH
RGPL
>gi|281342298|gb|EFB17882.1| hypothetical protein PANDA_018208 [Ailuropoda melanoleuca]
AFSEDHVIIQAEFYMTPDPSGEYMFDFDGDEIFHVDLEKKETVWRLEEFGRFASFEAQGALANIAVDKANLDIMIKRSNH
TPNTNVPPEVTVLSNTPVELGEPNTLICFIDKFSPPVINVTWLRNGNPVTTGVSETVFLPREDHLFRKFHYLPFLPSADD
VYDCKVEHWGLDKPLLKHWEFEAPTPLPETTENVVCALGLVVGLVGIIVGTVFIIKGMRKVNAGERRGPL
>gi|591335300|ref|XP_007093324.1| PREDICTED: mamu class II histocompatibility antigen, DR alpha chain-like isoform X3 [Panthera tigris altaica]
MPINGVLVLGFLIVAFLMYPQDSGGIKEEHVIIQAEFYLKTDSSGEFMFDFDGDEIFHMDMEKKETVWRLEEFGRFASFE
AQGALANIAVDKANLDILIKRSNNTPNTNEPPEVTVLSNSPVELGEPNILICFIDKFSPPVINVTWLRNGKPVTTGVSET
VFLPREDHLFRKFHYLPFLPSVENVYDCKVEHWGLDEPLLKHWEFDAPTPLPETTENVVCALGLVVGLVGIIVGTIFIIK
GMRKVNAGERRGPL
>gi|76446372|gb|ABA42972.1| MHC class II antigen alpha chain [Sus scrofa]
MVPGRVLMWGALALTAVMSACGGEDIAADHVASYGLNVYQSYGPSGYYTHEFDGDEQFYVDLEKKETVWQLPLFSKFTSF
DPQGALRNIATAKHNLNILIKRSNNTAAVNQVPEVTVFPKSPVMLGQPNTLICHVDSIFPPVINITWLKNGHSVTEGFSE
TSFLSRNDHSFLKISYLTFLPSDDDFYDCKVEHWGLDKPLLKHWEPEIPAPMSELTETVVCALGLIVGLVGIVVGTVFII
QGLRSGGPSRHQGSL
>gi|76446366|gb|ABA42969.1| MHC class II antigen alpha chain [Sus scrofa]
MVSGRVLMWGALALTAVMSACGGEDIAADHVASYGLNVYQSYGPSGYYTHEFDGDEEFYVDLGKKETVWQLPLFSKFRSF
DPQGALRNIATAKHNLNILIKRSNNTAAVNQVPEVTVFPKSPVMLGQPNTLICHVDNIFPPVINITWLKNGHSVTEGFSE
TSFLSRNDHSFLKISYLTFLPSDDDFYDCKVEHWGLDKPLLKHWEPEIPAPMSELTETVVCALGLIVGLVGIVVGTVLLI
RGLRSGGPSRHQGSL
>gi|189303530|ref|NP_001121543.1| chloride anion exchanger precursor [Felis catus] >gi|2304945|gb|AAB65587.1| MHC class II antigen [Felis catus]
MAVSRVPVLGFCIMALLMGPQESLAIKEEHVIIQAEFYLKPDSSGEFMFDFDGDEIFHVDMEKKETVWRLEEFGRFASFE
AQGALANIAVDKANLDILIKRSNNTPNTNEPPEVTVLSNSPVELGEPNILICFIDKFSPPVINVTWLRNGKPVTTGVSET
VFLPREDHLFRKFHYLPFLPSTEDVYDCKVEHWGLDEPLLKHWEFDAPTPLPETTENVVCALGLIVGLVGIIVGTIFIIK
GMRKVNAGERQGPL
>gi|42794346|gb|AAS45648.1| MHC class II antigen [Zalophus californianus]
FFIMALLMGPQESWAIKEDHVIIQAEFYLTPDPSGEFMFDFDGDEIFHVDMEKKETVWRLEEFGRFASFEAQGALANIAV
DKANLDIMIKRSNHTPNTNVPPEVTVLSNTPVELGEPNTLICFIDKFSPPVINVTWLRNGNPVTTGVSETVFLPREDHLF
RKFHYLPFLPSADDVYDCKVEHWGLDKPLLKHREFEAPTPLPETKENVVCALGLVVGLVGIIVGTIFIIKGMRKVNAGER
RGPL
>gi|42794354|gb|AAS45652.1| MHC class II antigen [Zalophus californianus]
FFIMALLMGPQESWAIKEDHVIIQAEFYLTPDPSGEFMFDFDGDEIFHVDMEKKETVWRLEEFGRFASFEAQGALANIAV
DKANLDIMIKRSNHTPNTNVPPEVTVLSNTPVELGEPNTLICFIDKFSPPVINVTRLRNGNPVTTGVSETVFLPREDHLF
RKFHYLPFLPSADDVYDCKVEHWGLDKPLLKHWEFEAPTPLPETKENVVCALGLVVGLVGIIVGTIFIIKGMRKVNAGER
RGPL
>gi|554532968|ref|XP_005861241.1| PREDICTED: SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like [Myotis brandtii]
MRMALNRALIWGALALTTVLSRCGGEDIVADHVGNYGPCFSQSYGPSGQYTFEFDGEEIFYVDQKKRETVWRLPGLSEFG
GFDPQGGLRNMATMNHNLGILIKRSNSTAAINEVPEVTVFPKAPVELGQPNTLICAVDNIFPPVINISWLSNGHSVTQGV
SETSFLPKRDHSFLKISYLTFLPSADDVYDCKVEHWGLDQPLLKHWEPEIPAPMSELTETVVCALGLAVGLVGIVTGTVF
IIQGLRPGGASRHQGPL
>gi|76446354|gb|ABA42963.1| MHC class II antigen alpha chain [Sus scrofa]
MVPGRVLMWGALALTAVMSACGGEDIAADHVASYGLNVYQSYGPSGYFTHEFDGDEEFYVDLEKKETVWRLPLFSEFTSF
DPQGALRNIATLKHNLNIVIKRSNNTAAVNQVPEVTVFPKSPVILGQPNTLICHVDNIFPPVINITWLKNGHSVTEGFSE
TSFLSKNDHSFLKISYLTFLPSDDDFYDCKVEHWGLDKPLLKHWEPEIPAPMSELTETVVCALGLIVGLVGIVVGTVFII
QGLRSGGPSRHQGSL
>gi|573008325|emb|CDL68736.1| MHC class II DQA [Ovis aries] >gi|573008327|emb|CDL68737.1| MHC class II DQA [Ovis aries]
MILNRALILGALALTAMMSPSGSEDIVADHIAAYGINVYHSYGPSGYYTHEFDGDEEFYVDLEKRETVWHLPVFSQFRSF
DPQGALRNIATVKHNLEVLIQRSNSTAATNKVPEVTVFSKSPMMLGQPNTLICHVDNIFPPVINITWLRNGHSVIEGVSE
TSFLSKDDHSFSKISYLTFLPSDDDVYDCKVEHWGLDKPLLKHWEPEIPAPMSELTETVVCALGLTVGLVGIVVGTVLII
RGLRSGGPSRHQGPL
>gi|76446376|gb|ABA42974.1| MHC class II antigen alpha chain [Sus scrofa]
MVPGRVLMWGALALTAVMSACGGEDIAADHVASYGLNVYQSYGPSGYYTHEFDGDEQFYVDLEKKETVWQLPLFSKFTSF
DPQGALRNIATAKHNLNILIKRSNNTAAVNQVPEVTVFPKSPVMLGQPNTLICHVDNIFPPVINITWLKNGHSVTEGFSE
TSFLSKNDHSFLKISYLTFLPSDDDFYDCKVEHWGLDKPLLKHWEPEIPAPMSELTETVVCALGLIVGLVGIVVGTVFII
QGLRSGGPSRHQGSL
>gi|1009245|dbj|BAA09045.1| MHC class II DQA1 precursor [Bos taurus]
MILNRALILGALALTTMMSPSGSEDIVADHIGTYGISIYHTYGPSGYYTHEFDGDEEFYVDLEKRETVWRLPVFSKFATF
DPQGALRNIATMKHNLEIVIQRSNSTAATNKVPEVTVFSKSPVMLGQPNTLICHVDNIFPPVINITWLRNGHSVTEGVSE
TSFLIKSDYSFLKINYLTFLPSDDDVYDCKVEHWGLDEPLLKHWEPDIPAPMSELTETVVCALGLTVGLVGIMVGTILII
QGLRSGGPSRHQGPL
>gi|30909249|gb|AAP37549.1| MHC class II antigen [Sus scrofa] >gi|59063139|gb|AAW84087.1| MHC class II antigen [Sus scrofa] >gi|189514154|gb|ACE07014.1| MHC class II antigen [Sus scrofa]
MVPGRVLMWGALALTALMSACGGEDIAADHVASYGLNVYQSYGPSGYYTHEFDGDEEFYVDLGKKETVWQLPLFSKFRSF
DPQGALRNIATAKHNLNILIKRSNNTAAVNQVPEVTVFPKSPVMLGQPNTLICHVDNIFPPVINITWLKNGHSVTEGFSE
TSFLSKNDHSFLKISYLTFLPSDDDFYDCKVEHWGLDKPLLKHWEPEIPAPMSELTETVVCALGLIVGLVGIVVGTVFII
QGLRSGGPSRHQGSL
>gi|168208374|gb|ACA21772.1| MHC class II antigen [Sus scrofa] >gi|284192650|gb|ADB82917.1| MHC class II antigen [Sus scrofa]
MVPGRVLMWGALALTAVMSACGGEDIAADHVASYGLNVYQSYGPSGYFTHEFDGDEEFYVDLEKKETVWQLPLFSKFRSF
DPQGALRNIATAKYNLNILIKRSNNTAAVNQVPEVTVFPKSPVMLGQPNTLICHVDNIFPPVINITWLKNGHSVTEGFSE
TSFLSKNDHSFLKISYLTFLPSDDDFYDCKVEHWGLDKPLLKHWEPEIPAPMSELTETVVCALGLIVGLVGIVVGTVFII
QGLRSGGPSRHQGSL
>gi|76446358|gb|ABA42965.1| MHC class II antigen alpha chain [Sus scrofa]
MVPGRVLMWGALALTAVMSACGGEDIAADHVASYGLNVYQSYGPSGYYTHEFDGDEEFYVDLEKKETVWQLPLFSKFTSF
DPQGALRNIATLKHNLNIVTKRSNNTAAVNQVPEVTVFPKSPVMLGQPNTLICHVDSIFPPVINITWLKNGHSVTEGFSE
TSFLSRNDHSFLKISYLTFLPSDDDFYDCKVEHWGLDKPLLKHWEPEIPAPMSELTETVVCALGLIVGLVGIVVGTVFII
QGLRSGGPSRHQGSL
>gi|334323584|ref|XP_001376751.2| PREDICTED: mamu class II histocompatibility antigen, DR alpha chain-like isoform X1 [Monodelphis domestica] >gi|611995567|ref|XP_007483702.1| PREDICTED: mamu class II histocompatibility antigen, DR alpha chain-like isoform X2 [Monodelphis domestica]
MMAPNKAWILGALTLAALLSPWGAKAIQENHVIIQAEFAQTSNPEGEFMFDFDGDEIFHVDMDKRETVWRLTDFSNFASF
EAQGALANLAVDKANLEIMMKRSNNTPDTNVPPEVTVFPKGPVELGHPNVLVCFIDKFSPPVLNVTWLQNGKPITDGVFE
TVFLPRADHSFRKFHYLTFIPSATDFYDCEVDHWGLEQPTIKHWEPEVRTPLPETTETVVCALGLAVGLVGIIAGTILFI
KAKRSSNTSRGGPRGPL
>gi|218564026|gb|ACK99138.1| MHC class II antigen alpha chain [Felis catus]
MAVSRVPVLGFCIMALLMGPQESLAIKEEHVIIQAEFYLKPDSSGEFMFDFDGDEIFHVDMEKKETVWRLEEFGRFASFE
AQGALANIAVDKANLDILIKRSNNTPNTNEPPEVTVLSNSPVELGEPNILICFIDKFSPPVINVTWLRNGKPVTTGVSET
VFLPREDHLFRKFHYLPFLPSTEDVYDCKVEHWGLDEPLLKHWEFDAPTPLPETTENVVCALGLIVGLVGIIVGTIFIIK
GMRKVNAGERRGPL
>gi|194332489|ref|NP_001123696.1| SLA class II histocompatibility antigen, DQ haplotype D alpha chain precursor [Sus scrofa] >gi|38503450|gb|AAR22517.1| MHC class II antigen [Sus scrofa] >gi|168208372|gb|ACA21771.1| MHC class II antigen [Sus scrofa]
MVPGRVLMWGALALTAVMSACGGEDIAADHVASYGLNVYQSYGPSGYYTHEFDGDEEFYVDLEKKETVWQLPLFSKFTSF
DPQGALRNIATAKHNLNILIKRSNNTAAVNQVPEVTVFPKSPVMLGQPNTLICHVDNIFPPVINITWLKNGHSVTEGFSE
TSFLSKNDHSFLKISYLTFLPSDDDFYDCKVEHWGLDKPLLKHWEPEIPAPMSELTETVVCALGLIVGLVGIVVGTVFII
QGLRSGGPSRHQGSL
>gi|591335298|ref|XP_007093323.1| PREDICTED: mamu class II histocompatibility antigen, DR alpha chain-like isoform X2 [Panthera tigris altaica]
MAVSRAPVLGFFIMALLMGPQESLAIKEEHVIIQAEFYLKTDSSGEFMFDFDGDEIFHMDMEKKETVWRLEEFGRFASFE
AQGALANIAVDKANLDILIKRSNNTPNTNEPPEVTVLSNSPVELGEPNILICFIDKFSPPVINVTWLRNGKPVTTGVSET
VFLPREDHLFRKFHYLPFLPSVENVYDCKVEHWGLDEPLLKHWEFDAPTPLPETTENVVCALGLVVGLVGIIVGTIFIIK
GMRKVNAGERRGPL
>gi|76446364|gb|ABA42968.1| MHC class II antigen alpha chain [Sus scrofa]
MVPGRVLMWGAVALTTVMSACGGEDIAADHVASYGLNVYQSYGPSGYFTHEFDGDEEFYVDLEKKETVWRLPLFSKFTSF
DPQGALRNIATAKHNLNILIKRSNNTAAVNQVPEVTVFPKSPVMLGQPNTLICHVDNIFPPVINITWLKNGHSVTEGFSE
TSFLSKNDHSFLKISYLTFLPSDDDFYDCKVEHWGLDKPLLKHWEPEIPAPMSELTETVVCALGLIVGLVGIVVGTVFII
QGLRSGGPSRHQGSL
>gi|165998|gb|AAA16625.1| MHC OVAR-DQ-ALPHA-2.2 [Ovis aries]
MVLNRALILGALALTTMMSPSGGEDIVADHVGIYGADFYQSHGPSGQYTHEFDGDELFYVDLGKKETVWRLPMFGEFTSF
DPQGALSEIATAKHNLDIMIKRSNFTPVINEVPEVTVFSKSPVMLGQPNTLICHVDNIFPPVINITWLKNGHAVTEGVSE
TSFLPKDDHSFLKIGYLTFLPSDDDVYYCKVEHWGLEEPLLKHWEPEIPAPMSELTETVVCALGLTMGLVGIVVGTIFII
QGLRSGGASRHQGPL
>gi|1536893|emb|CAA69154.1| major histocompatability complex class II [Bos taurus]
MVLNRALILGALALTTMMSPSGSEDIVADHIGTYGISIYHTYGPSGYYTHEFDGDEEFYVDLEKRETVWRLPVFSKFATF
DPQGALRNIATTKHNLEIVIQRSNSTAATNKVPEVTVFSKSPVMLGQPNTLICHVDNIFPPVINITWLRNGHSVTEGVSE
TSFLIKSDYSFLKINYLTFLPSDDDVYDCKVEHWGLDEPLLKHWEPDIPAPMSELTETVVCALGLTVGLVGIMVGTILII
QGLRSGGPSRHQGPL
>gi|157862703|gb|ABV90471.1| MHC class II alpha domain [Ovis aries] >gi|573008335|emb|CDL68741.1| MHC class II DQA [Ovis aries]
MVLNRALILGALALTTMMSPSGGEDIIADHVGIYGADFYQSHGPSGQYTHEFDGDELFYVDLGKKETVWRLPMFGEFTSF
DPQGALSEIAKAKQTLDIMIKRSNFTPVINEVPEVTVFSKSPVMLGQPNTLICHVDNIFPPVINITWLKNGHAVTEGVSE
TSFLPKDDHSFLKIGYLTFLPSDDDVYDCKVEHWGLEEPLLKHWEPEIPAPMSELTETVVCALGLTVGLVGIVVGTIFII
QGLRSGGASRHQGPL
>gi|378532201|gb|AFC17491.1| MHC class II antigen [Sus scrofa]
MVPGRVLMWGALALTTVISACGGEDIAADHVASYGLNVYQSYGPSGYYTHEFDGDEQFYVDLEKKETVWRLPLFSEFTSF
DPQGALRNIATLKHNLNIVTKRSNNTAAVNQVPEVTVFPKSPVMLGQPNTLICHVDNIFPPVINITWLKNGHSVTEGFSE
TSFLSKNDHSFLKISYLTFLPSDDDFYDCKVEHWGLDKPLLKHWEPEIPAPMSELTETVVCALGLIVGLVGIVVGTVFII
QGLRSGGPSRHQGSL
>gi|122198|sp|P15981.1|HA2D_PIG RecName: Full=SLA class II histocompatibility antigen, DQ haplotype D alpha chain; Flags: Precursor >gi|164565|gb|AAA31083.1| MHC SLA-DQ alpha chain precursor [Sus scrofa] >gi|29124706|gb|AAO63759.1| MHC class II antigen [Sus scrofa] >gi|30909263|gb|AAP37556.1| MHC class II antigen [Sus scrofa] >gi|30909267|gb|AAP37558.1| MHC class II antigen [Sus scrofa] >gi|32699969|gb|AAP50526.1| MHC class II antigen [Sus scrofa] >gi|66796193|dbj|BAD99114.1| MHC class II histocompatibility antigen SLA-DQA [Sus scrofa] >gi|66796195|dbj|BAD99115.1| MHC class II histocompatibility antigen SLA-DQA [Sus scrofa]
MVPGRVLMWGALALTAVMSACGGEDIAADHVASYGLNVYQSYGPSGYYTHEFDGDEEFYVDLGKKETVWQLPLFSKFRSF
DPQGALRNIATAKHNLNILIKRSNNTAAVNQVPEVTVFPKSPVMLGQPNTLICHVDNIFPPVINITWLKNGHSVTEGFSE
TSFLSKNDHSFLKISYLTFLPSDDDFYDCKVEHWGLDKPLLKHWEPEIPAPMSELTETVVCALGLIVGLVGIVVGTVFII
QGLRSGGPSRHQGSL
>gi|478500079|ref|XP_004424363.1| PREDICTED: SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like [Ceratotherium simum simum]
MIPNRALILGALALTTMMSPCGGEDIVADHVASYGTNVYQSYGSSGQYTHEFDGDEEFYVDLEKKETVWQLPLFSKFRSF
DPQGALRNIALMKNGLDILIKLSNSTAATNKVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVINVTWLRNGHSVTEGVSE
TSFLPKNDHSFFKINYLTFLPSADDIYDCKVEHWGLDEPLLKHWEPEIPTPMSELTETVVCALGLAVGLVGIVMGTVFII
QGLRSGGASRHQGPL
>gi|76446374|gb|ABA42973.1| MHC class II antigen alpha chain [Sus scrofa]
MVPGRVLMWGALALTAVMSACGGEDIAADHVASYGLNVYQSYGPSGYYTHEFDGDEQFYVDLEKKETVWQLPLFSKFTSF
DPQGALRNTATAKHNLNILIKRSNNTAAVNQVPEVTVFPKSPVMLGQPNTLICHVDNIFPPVINITWLKNGHSVTEGFSE
TSFLSKNDHSFLKISYLTFLPSDDDFYDCKVEHWGLDKPLLKHWEPEIPAPMSELTETVVCALGLIVGLVGIVVGTVFII
QGLRSGGPSRHQGSL
>gi|283837808|ref|NP_001164589.1| major histocompatibility complex, class II, DR alpha precursor [Oryctolagus cuniculus] >gi|529576|gb|AAA31394.1| integral membrane protein [Oryctolagus cuniculus]
MAISGGVPVLGFFIIAILMSPQKSWAIKEEHVIIQAEYFLSPDDLGEFMFDFDGDEIFHVDMDKKETVWRLKEFGQFASF
EAQGALANIAVDRANLDIMIKRSNHTPDTNVPPEVTLLPSSPVELGEPNVLICFIDKFSPPVINVTWLRNGNPVTMGVSE
TVFLPRDDHLFRKFHYLPFLPSTEDVYDCKVEHWGLEEPTLKHWEFEARTPLPETTENVVCALGLVVGLVGIIVGTIFII
KGVHKGNATERRGTL
>gi|76446370|gb|ABA42971.1| MHC class II antigen alpha chain [Sus scrofa]
MVPGRVLMWGALALTAVMSACGGEDIAADHVASYGLHVYHSYGPSGYYTHEFDGDEQFYVDLEKKETVWRLPLFSKFTSF
DPQGALRNIATAKHNLNILIKRSNNTAAVNQVPEVTVFPKSPVMLGQPNTLICHVDNIFPPVINITWLKNGHSVTEGFSE
TSFLSKNDHSFLKISYLTFLPSDDDFYDCKVEHWGLDKPLLKHWEPEIPAPMSELTETVVCALGLIVGLVGIVVGTVFII
QGLRSGGPSRHQGSL
>gi|594046254|ref|XP_006047582.1| PREDICTED: SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like [Bubalus bubalis]
MILNRALILGALALITMMSPSGGEDIVADHIGTYGINVYHTYGPSGYYTHEFDGDEQFYVDLEKRETVWRLPVFSKFASF
DPQGALRNIATEKHNLEIMIQRSNSTAATNKVPEVTVFSKSPVMLGQPNTLICHVDNIFPPVVNITWLRNGHSVIEGVSE
TSFLSKNDFSFSKISYLTFLPSDDDVYDCKVEHWGLDKPLLKHWEPEIPAPMSELTETVVCALGLTVGLVGIVVGTVLII
RGLRSGGPSRHQGPL
>gi|76446382|gb|ABA42977.1| MHC class II antigen alpha chain [Sus scrofa]
MVPGRVLMWGALALTAVMSACGGEDIAADHVASYGLNVYQSYGPSGYYTHEFDGDEEFYVDLGKKETVWQLPLFSKFRSF
DPQGALRNVAAAKHNLNILIKRSNNTAAVNQVPEVTVFPKSPVMLGQPNTLICHVDNIFPPVINITWLKNGHSVTEGFSE
TSFLSKNDHSFLKISYLTFLPSDDDFYDCKVEHWGLDKPLLKHWEPEIPAPMSELTETVVCALGLIVGLVGIVVGTVFII
QGLRSGGPSRHQGSL
>gi|218664512|ref|NP_001136284.1| MHC class II DQ-alpha chain precursor [Equus caballus] >gi|408717184|gb|AFU83038.1| MHC class II antigen [Equus caballus] >gi|408717186|gb|AFU83039.1| MHC class II antigen [Equus caballus]
MILNRALILGALTLTTMMSSCGGEDIVADHIGSYGITMYESSGPSGQYNFEFDGDETFYVDLEKKETIWRLPEFSKFSSF
DPQGALETIAIIKEHLDVMMKRSNSTPATNEVPEVTVFPKSPMMLDQPNTLICLADNIFPPVINITWLKNGHSVTEGVSE
TSFLIKNDYSFFKISYLTFLPSADDIYDCKVEHWGLDEPLLKHWEPEIPTPMSELTETVVCALGLAVGLVGIVVGTFLII
RGLRSGGISRHQGAL
>gi|218564028|gb|ACK99139.1| MHC class II antigen alpha chain [Felis catus]
MAVSRVPVLGFCIMALLMGPQESLAIKEEHVIIQAEFYLKPDSSGEFMFDFDGDEIFHVDMEKKETVWRLEEFGRFASIE
AQGALANIAVDKANLDILIKRSNNTPNTNEPPEVTVLSNSPVELGEPNILICFIDKFSPPVINVTWLRNGKPVTTGVSET
VFLPREDHLFRKFHYLPFLPSTEDVYDCKVEHWGLDEPLLKHWEFDAPTPLPETTENVVCALGLIVGLVGIIVGTIFIIK
GMRKVNAGERRGPL
>gi|471419300|ref|XP_004391141.1| PREDICTED: SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like [Trichechus manatus latirostris]
MILNEALILRVLVLTTMMSACGGEDIVADHVGCHGATIYQSYGPRGQYTHEFDGDELFYVNLEKKETVWRLPMFSRFASF
DPQGGLRNIAVLKHNLDILIKRSNSTAATNDVPEVTVFPKSSVMLGQPNLLICLVDNIFPPVINITWFSNGHPVTEGVAE
TNFLPKDDHSFSKISYLTFLPSADEVYDCKVDQWGLDEPLLKHWEPEIPTPMTELTESVVCALGLAVGLVGIVVGTILII
RGLRSGGVSRHQGSL
>gi|478500073|ref|XP_004424360.1| PREDICTED: SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like [Ceratotherium simum simum]
MILNRALILGALALTTIMSPCGGEDIVADHVGSYGTNVYQSYGPSGQYTHEFDGDEQFYVDLERQETVVRLPLFSGFKGF
DPQGALRNIAILKHNLDLVMKRSNSTAATNKVPEVTVFPKSPVMLGQPNTLICFVDNIFPPVINVTWLRNGHSVTEGVSE
TSFLPKNDHSFFKMNYLTFLPSADDIYDCKVEHWGLDEPLLKHWEPEIPTPMSELTETVVCALGLAVGLVGIVVGTVFII
QGLRSGGTSRHQGPL
>gi|395832102|ref|XP_003789115.1| PREDICTED: mamu class II histocompatibility antigen, DR alpha chain-like [Otolemur garnettii]
MAVSGFSVLGFFIMAVLMSPQESWAIKEEHVIIQAEFYLSPDQSGEFMFDFDGDEIFHVDMGKKETVWRLEEFGQYAGFE
AQGALANIAVDKANLDIMIKRSNNTPDTNVPPEVTVLTNSPVELGEPNVLICFIDKFSPPVVNVTWLQNGKPVTTGVSET
VFLPREDHLFRKFHYLPFLPSAEDVYDCRVEHWGLDEPLLKHWEFDARTPLPETTENVVCALGLVVGLVGIIAGTVFIIK
GVRKSNAAERRGQGPL
>gi|560959495|ref|XP_006202201.1| PREDICTED: SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like isoform X1 [Vicugna pacos]
MILNRALILGVLTLTTIMSPCGGQDILADHVASYGVNVYQSYGPSGQYTHEFDGDEQFYVDLEKKETVWQLPVFSKFTSF
DPQGALRNLDVGKHNLDIMIKRSNSTAATNEVPEVTVFPKAPVMLGQPNTLICHVDNIFPPVISITWLRNGRSVTEGVSE
TSFLSKNDHSFLKISYLTFLPSDDDIYDCKVEHWGLDEPLLKHWEPEIPTPMSELTETVVCALGLTMGLIGIVVGTVFII
QGLRSGAPSRHQGPL
>gi|488548159|ref|XP_004465572.1| PREDICTED: HLA class II histocompatibility antigen, DQ alpha 1 chain-like [Dasypus novemcinctus]
MALNKALILGALVLTTVTTTHGGEDIVADHVASYGVNVYQSYGPSGQYTHEFDGDEEFYVDLDKKETVWTMPEFSQLRNF
DPQGGLRNIAVLKHNLDIMIKRSNSTAATNEVPEVTVFPKSPVELGHPNLLICVVDNIFPPVVNITWLSNGHSVTEGVSE
TNFLSKPDHSFLKMSYLTFLPSADDVYDCRVEHWGLKEPLLKHWEPQIPAPMSELTETVVCGLGLAVGLVGIVVGTVLIF
RGLRPGGASRHQGAL
>gi|281338475|gb|EFB14059.1| hypothetical protein PANDA_002284 [Ailuropoda melanoleuca]
QTHRPSGEYMFEFDGDEQFYVDLDKETVWQLPEFIHAFDFDAWRRVADIVTARKDLNILIQGSNHTRATNEPPEVTVFPK
EPVELGQPNTLICHVDKFFPPVLNVTWLCNGQIVTKGITETVFLPSTEFRFHKFHYLTFLPTAEDVYDCKVKHWGLDQPL
LQHWEAQELIQVPEMKGTVVCVLGLVAGVAGILTGIAVLKTRWPDSIPR
>gi|512021340|ref|XP_004827897.1| PREDICTED: HLA class II histocompatibility antigen, DR alpha chain-like isoform X2 [Mustela putorius furo]
MAINGVPVLGFFIMTLLMGPQESQAIKEDHVIIQAEFYLTPDQSGEFMFDFDGDEIFHVDMEKKETVWRLEEFGRFASFE
AQGALANIAVDKANLDIMIKLSNHTPNTNVPPEVTVLSNTPVELGEPNTLICFIDKFSPPVINVTWLRNGNPVTTGVSVS
VFLPREDHLFRKFHYLPFLPSANDVYDCKVEHWGLEEPLLKHWEFEPPTPLPETTENVVCALGLVVGLVGIIVGTIFIIK
GMRKANAGERRGPL
>gi|573008349|emb|CDL68748.1| MHC class II DQA, partial [Ovis aries]
RALILGALALTTMMSPSGGEDIVADHVGSYGTVIYQSHGPSGQYTHEFDRDELFYVDLEKKETVWRLPMFSQFAGFDPQG
ALSNIATAKHNLDIMTQWHNSTPVINEVPEVTVFSKSPVMLGQPNTLICHVDNIFPPVINITWLKNGHAVSEGVSETSFL
PKDDDSFFRFGYLTFLPSDDDVYDCKVEHWGLDEPLLKHWEPEIPAPMSEVTETVVCALGLTVGLVGIVVGTIFIIQGLR
SGGASRHQGPL
>gi|560908530|ref|XP_006180580.1| PREDICTED: SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like [Camelus ferus]
MILNRALILGVLTLTTVMSPCGAQDIVADHVASYGINVYQSYGPSGQYTHEFDGDEEFYVDLEKKETVWQLPLFSKFRNF
DPQGALRNLDISKHNLDIIIKRSNSTAATNEVPEVTVFPKAPVMLGQPNTLICHVDNIFPPVINITWLRNGRSVTEGVSE
TSFLSKNDHSFLKISYLTFLPSDDDIYDCKVEHWGLDEPLLKHWEPEIPTPMSELTETVVCTLGLTVGLVGIVVGTVFII
QGLRSGAPSRHQGPL
>gi|76446380|gb|ABA42976.1| MHC class II antigen alpha chain [Sus scrofa]
MVPGRVLMWGALALTAVMSACGGEDIAADHVASYGLNVYQSYGPSGYFTHEFDGDEEFYVDLEKKETVWQLPLFSKFRSF
DPQGALRNIATAKYNLNILIKRSNNTAAVNQVPEVTVFPKSPVMLGQPNTLICHVDNIFPPVINITWLKNGHSVTEGFSE
TSFLSKNDHSFLKISYLTFLPSDDDFYDCKVERWGLDKPLLKHWEPEIPAPMSELTETVVCALGLIVGLVGIVVGTVFII
QGLRSGGPSRHQGSL
>gi|1027491|dbj|BAA08765.1| MHC class II DQA2 precursor [Bos taurus] >gi|59858353|gb|AAX09011.1| major histocompatibility complex, class II, DQ alpha 1 precursor [Bos taurus]
MVLNRALILGALALTTMMSSSGGEDIVADHVGSYGTEIYQSHGPSGQYTQEFDGDEMFYVDLGKKETVWRLPMFSQFAGF
DPQAALSEIATAKHNLDVLTKRSNFTPVINEVPEVTVFSKSPVMLGQPNTLICHVDNIFPPVINITWLKNGHAVTEGVSE
TSFLPKDDHSFLKIGYLTFLPSDNDIYDCKVEHWGLDEPLLKHWEPEVPAPMSELTETVVCALGLTVGLVGIVVGTIFII
QGLRSGGASRHQGPL
>gi|82581698|gb|ABB84249.1| MHC class II antigen [Sus scrofa]
MVPGRVLMWGALALTAVMSACGGEDIAADHVASYVINVYQSYGPSGYYTHEFDGDEQFYVDLEKKETVWRLPLFSEFTSF
DPQGALRNIATVKHNLNILTKRSNNTAAVNQVPEVTVFSKSPVILGQPNTLICHVDSIFPPVINITWLKNGHSVTEGFSE
TSFLSRNDHSFLKISYLTFLPSDDDFYDCKVEHWGLDKPLLKHWEPEIPAPMSELTETVVCALGLIVGLVGIVVGTVFII
QGLRSGGPSRHQGSL
>gi|62912510|gb|AAY21810.1| MHC class II antigen [Sus scrofa]
MVPGRVLMWGALALTAVMSACGGEDIAADHVASYGLNVYQSYGPRGYYTHEFDGDEEFYVDLGKKETVWQLPLFSKFTSF
DPQGALRNIATLKHNLNILIKRSNNTAAVNQVPEVTVFSKSPVMLGQPNTLICHVDNIFPPVINITWLKNGHSVTEGFSE
TSFLSKNDHSFLKISYLTFLPSDDDFYDCKVEHWGLDKPLLKHWEPEIPAPMSELTETVVCALGLIVGLVGIVVGTVFII
QGLRSGGPSRHQGSL
>gi|392514689|gb|AFM77731.1| MHC class II antigen [Bos grunniens x Bos taurus]
MVLNRALILGALALTTMMSSSGGEDIVADHVGSYGTEIYQSHGPSGQYTQEFDGDEMFYVDLGKKETVWRLPMFSQFAGF
DPQAALSEIATSKHNLDVLTKRSNFTPVINEVPEVTVFSKSPVMLGQPNTLICHVDNIFPPVINITWLKNGHAVTEGVSE
TSFLPKDDHSFLKIGYLTFLPSDNDIYDCKVEHWGLDEPLLKHWEPEVPAPMSELTETVVCALGLTVGLVGIVVGTIFII
QGLRSGGTSRHQGPL
>gi|31981716|ref|NP_034508.2| histocompatibility 2, class II antigen A, alpha precursor [Mus musculus] >gi|6226629|sp|P14434.2|HA2B_MOUSE RecName: Full=H-2 class II histocompatibility antigen, A-B alpha chain; Short=IAalpha; Flags: Precursor [Mus musculus] >gi|2555190|gb|AAB81529.1| IAalpha subunit [Mus musculus] >gi|2944427|gb|AAC05285.1| major histocompatibility protein class II alpha chain [Mus musculus] >gi|18043826|gb|AAH19721.1| Histocompatibility 2, class II antigen A, alpha [Mus musculus] >gi|21618808|gb|AAH31711.1| Histocompatibility 2, class II antigen A, alpha [Mus musculus] >gi|148678320|gb|EDL10267.1| histocompatibility 2, class II antigen A, alpha [Mus musculus]
MPRSRALILGVLALTTMLSLCGGEDDIEADHVGTYGISVYQSPGDIGQYTFEFDGDELFYVDLDKKETVWMLPEFGQLAS
FDPQGGLQNIAVVKHNLGVLTKRSNSTPATNEAPQATVFPKSPVLLGQPNTLICFVDNIFPPVINITWLRNSKSVADGVY
ETSFFVNRDYSFHKLSYLTFIPSDDDIYDCKVEHWGLEEPVLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTIFI
IQGLRSGGTSRHPGPL
>gi|602300|gb|AAA85825.1| MHC class II DN alpha protein precursor, partial [Macropus rufogriseus]
SRVLILRTLSLVVLLSPQGTSQSIEADHVGIYGTGVYQSYESSGQYTQEFDEDELFYVDLQKKETVWRLPEFSHFSSFDP
QGGLREKATCKYNLDILIKRSNRSRAISVPPEVTVFSESPVELGQPNVLICLVDNIFPPVVNIKWLRNGQVITTGVSETD
FYSRPDHKFRKFYYLTFLPNTEDFYDCKVEHWGLEQPLLKHWEPQIPSPVPETTETVVCALGLAVGLVGIIVGTILIIRG
MRSSSRFQHQGPL
>gi|76446378|gb|ABA42975.1| MHC class II antigen alpha chain [Sus scrofa]
MVPGRVLMWGAVALTAVMSACGGEDIAADHVASYGLNVYQSYGPSGYYTHEFDGDEEFYVDLEKKETVWQLPLFSKFTSF
DPQGALRNIATAKHNLNILIKRSNNTAAVNKVPEVTVFPKSPVMLGQPNTLICHVDSIFPPVINITWLKNRHSVTEGFSE
TSFLSRNDHSFLKISYLTFLPSDDDFYDCKVEHWGLDKPLLKHWEPEIPAPMSELTETVVCALGLIVGLVGIVVGTVFII
QGLRSGGPSRHQGSL
>gi|29888113|gb|AAP03004.1| MHC class II antigen [Sus scrofa] >gi|30909259|gb|AAP37554.1| MHC class II antigen [Sus scrofa] >gi|168208376|gb|ACA21773.1| MHC class II antigen [Sus scrofa] >gi|189514156|gb|ACE07015.1| MHC class II antigen [Sus scrofa] >gi|269986053|gb|ACZ57335.1| MHC class II antigen [Sus scrofa] >gi|284192652|gb|ADB82918.1| MHC class II antigen [Sus scrofa]
MVPGRVLMWGALALTAVMSACGGEDIAADHVASYGLNVYQSYGPSGYYTHEFDGDEEFYVDLEKKETVWQLPLFSKFTSF
DPQGALRNIATLKHNLNIVTKRSNNTAAVNKVPEVTVFSKSPVILGQPNTLICHVDSIFPPVINITWLKNGHSVTEGFSE
TSFLSRNDHSFLKISYLTFLPSDDDFYDCKVEHWGLDKPLLKHWEPEIPAPMSELTETVVCALGLIVGLVGIVVGTVFII
QGLRSGGPSRHQGSL
>gi|391224613|gb|AFM37579.1| MHC class II antigen [Bos grunniens]
MVLNRALILGALALTTMMSSSGGEDIVADHVGSYGTEIYQSHGPSGQYTQEFDGDEMFYVDLGKKETVWRLPMFSQFAGF
DPQAALSEIATSKHNLDVLTKRSNFTPVINEVPEVTVFSKSPVMLGQPNTLICHVDNIFPPVINITWLKNGHAVTEGVSE
TSFLPKDDHSFLKIGYLTFLPSDNDIYDCKVEHWGLDEPLLKHWEPEVPAPMSELTETVVCALGLTVGLVGIVVGTIFII
QGLRSGGASRHQGPL
>gi|548533491|ref|XP_005701511.1| PREDICTED: SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like [Capra hircus]
MVLNRALILGVLALTTMTSPCGGEDIVADHIGTYGADFYQSHGPSGQYIHEFDGDELFYVDLGKKETVWRLPMFGELTSF
DPQGALNNIAIAKHNLDSLTKLYNFTPVINEVPEVTVFSKSPVMLGQPNTLICHVDNIFPPVINITWLRNGHAVTEHVSE
TSFLLRSDYSYLKISYLTFLPSDDDVYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLTVGLVGIVVGTVLII
RGLHSGGTSRHQGPL
>gi|32250684|gb|AAP74555.1| MHC class II antigen [Sus scrofa]
MVPGRVLMWGALALTAVMSACGGEDIAADHVASYGLNVYQSYGPSGYYTHEFDGDEEFYVDLEKKETVWQLPLFSKFTSF
DPQGALRNIATLKHNLNIVTKRSNNTAAVNQVPEVTVFSKSPVILGQPNTLICHVDSIFPPVINITWLKNGHSVTEGFSE
TSFLSRNDHSFLKISYLTFLPSDDDFYDCKVEHWGLDKPLLKHWEPEIPAPMSELTETVVCALGLIVGLVGIVVGTVFII
QGLRSGGPSRHQGSL
>gi|635095921|ref|XP_007971192.1| PREDICTED: mamu class II histocompatibility antigen, DR alpha chain [Chlorocebus sabaeus]
MAVSGVPVLGFFIIAVLMSAQESWAIKEEHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFE
AQGALANIAVDKANLEIMTKRSNNTPITNVPPEVTVLTNSPVELGEPNVLICFIDKFSPPVVKVTWLQNGKPVTTGVSET
VFLPREDHLFRKFHYLPFVPSTEDFYDCKVEHWGLDAPLLKHWEFDAPSPLPETTENVVCALGLIVGLVGIIVGTVFIIK
GVRKSNAAERRGPL
>gi|671001654|ref|XP_008691693.1| PREDICTED: SLA class II histocompatibility antigen, DQ haplotype D alpha chain [Ursus maritimus]
MTLNRVLILGTLALTTMMSPSGSEDIVADHVAYYGINVYQSYGPSGQYTHEFDGDEEFYVDLEKKETVWRLPMFSTFASF
DPQGALRNLAIVKQNLNIMIKRSNYTAATNEVPEVTVFPKSPVMLGQPNTLICLVDNIFPPVINVTWLKNRHSVTEGVSE
TSFLAKTDHSFLKISYLTFLPSADDIYDCKVEHWGLEEPLLKHWEPEIATPMSELTETVVCALGLAVGLVGIVVGTVFIV
QGLRSGGTPGHQGPL
>gi|115394788|gb|ABI97188.1| HA25 [Sus scrofa]
MVPGRVLMWGALALTAVMSACGGEDIAADHVASYGLNVYQSYGPSGYYTHEFDGDEEFYVDLGKKETVWQLPLFSKFRSF
DPQGALRNIATAKHNLNILIKRSNNTAAVNQVPEVTVFPKSPVMLGQPNTLICHVDNIFPPVINITWLKNGHSVTEGFSE
TSFLSKNDHSFLKISYLTFLPSDDDFYDCKVEHWGLDKPLLKHWEPEIPAPMSELTETVVCALGLIVGLVGIVVGTIFII
KGLRSGGSSRHPGPL
>gi|556723602|ref|XP_005957619.1| PREDICTED: SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like [Pantholops hodgsonii]
MILNRVLILGALTLTTMMSPSGSEDIVADHIAAYGINVYHSYGPSGYYTHEFDGDEEFYVDLEKKETVWHLPVFSQFGRF
DPQGALRNIATLKHNLEITIQRSNSTAATNKVPEVTVFSKSPMMLGQPNTLICHVDNIFPPVINITWLRNGHSVIEGVSE
TSFLSKDDHSFSKISYLTFLPSDDDVYDCKVEHWGLDKPLLKHWEPEIPAPMSELTETVVCALGLTVGLVGIVVGTILII
RGLRSGGPSRHQGPL
>gi|309400318|gb|ADO79585.1| MHC class II antigen [Microcebus murinus]
PVLGFLIMAVLMNPQESWAIKEEHVIIQAEFYLGPDQSGEFMFDFDGDEIFHVDMDKRETVWRLEEFGRFASFEAQGALA
NIAVDKANLDIMMKRSNHTPNTNVPPEVTVLTNAPVELGEPNVLICFIDKFSPPVVKVTWLQNGKPVTTGVSETVFLPRE
DHLFRKFHYLPFLPSTEDFYDCKVEHLGLDEPLLKHWEFDVPTPLPETTENVVCALGLVVGLVGIVAGTVLIVKGVRKGN
ATERRGPL
>gi|555995158|ref|XP_005909323.1| PREDICTED: SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like [Bos mutus] >gi|74355034|gb|AAI02954.1| BOLA-DQA2 protein [Bos taurus] >gi|440893807|gb|ELR46453.1| SLA class II histocompatibility antigen, DQ haplotype D alpha chain [Bos mutus]
MVLNRALILGALALTTMMSPNGGEDIVADHVGSYGTEIYQSHGPSGQYTQEFDGDEMFYVDLGKKETVWRLPMFSQFAGF
DPQAALSEIATSKHNLDVLTKRSNFTPVINEVPEVTVFSKSPVMLGQPNTLICHVDNIFPPVINITWLKNGHAVTEGVSE
TSFLPKDDHSFLKIGYLTFLPSDNDIYDCKVEHWGLDEPLLKHWEPEVPAPMSELTETVVCALGLTVGLVGIVVGTIFII
QGLRSGGASRHQGPL
>gi|550821810|ref|NP_001272609.1| HA25 precursor [Capra hircus] >gi|171198382|gb|ACB45433.1| HA25 [Capra hircus]
MVLNRALILGALALTTMMSPSGGEDIVADHVGSYGTEIYQSHGPSGQYTQEFDGDEMFYVDLGKKETVWRLPMFSQFAGF
DPQGALSEIATAKQNLDILTKHSNFTPAINEVPEVTVFSKSPVMLSQPNTLICHVDNIFPPVINITWLKNGHAVTEGVSE
TSFLPKDDHSFLKIGYLTFLPSDDDVYDCKVEHWGLDEPLLKHWEPETPAPMSELTETVVCALGLTVGLVGIVVGTIFII
QGLRSGGASRHQGPL
>gi|76446350|gb|ABA42961.1| MHC class II antigen alpha chain [Sus scrofa]
MVPGRVLMWGALALTTVMSACGGEDIAADHVASYGLNVYQSYGPSGYYTHEFDGDEEFYVDLEKKETVWRLPLFSEFTSF
DPQGALRNIATLKHNLNIVTKRSNNTAAVNKVPEVTVFSKSPVILGQPNTLICHVDSIFPPVINITWLKNGHSVTEGFSE
TSFLSRNDHSFLKISYLTFLPSDDDFYDCKVEHWGLDKPLLKHWEPEIPAPMSELTETVVCALGLIVGLVGIVVGTVFII
QGLRSGGPSRHQGSL
>gi|166006|gb|AAA16624.1| MHC OVAR-DQ-ALPHA-2.1 [Ovis aries]
MVLNRALILGALALTTMMSPSGCEDIVADHFGSYGTEIYQSHGPSGQYTQEFDGDELFYVDLGKKETVWRLPMFSQFAGF
DPQGALSEIATAKQNLDILTKRSNFTPAINEVPEVTVFSKSPVMLGQPNTLICHVDNIFPPVINITWLKNGHAVTEGVSE
TSFLPKDDHSFLKIGYLTFLPSDDDVYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLTVGLVGIVVGTIFII
QGLRSGGASRHQGPL
>gi|589982525|ref|XP_006997451.1| PREDICTED: h-2 class II histocompatibility antigen, A-B alpha chain-like [Peromyscus maniculatus bairdii]
MTPSRALVLGILALTVLSPCGGDDDIKADHVGSYGINVYQSYGPNGQYTHEFDGDEEFYVDLGKKETVWRIPEFAQLLSF
DPQHGLQNIAIMKHSLDILFKRSNYTLATNEVPEVTVFPKSPVLLGQPNTLICFVDKIFPPVINITWLKNSKSVTEGIYE
TSFLTNRDYSFHKMAYLTFIPSDDDVYDCKVEHWGLEEPVLKHWEPEVPAPMSELTETVVCALGLSVGIVGIVVGTVFII
QGLRSGGPSRHPGPL
>gi|393809073|gb|AFN25707.1| MHC class II antigen [Ovis aries]
MVLNRALILGALALTTMMSPSGGEDIVADHVGSYGTVIYQSHGPSGQYTHEFDRDELFYVDLEKKEAVWRLPMFSQFADF
DPQGALSNIATAKHNLDIMTQWHNSTPVINEVPEVTVFSKSPVMLGQPNTLICHVDNIFPPVINITWLKNGHAVSEGVSE
TSFLPKDDDSFFRFGYLTFLPSDDDVYDCKVEHWGLDEPLLKHWEPEIPAPMSEVTETVVCALGLTVGLVGIVVGTIFII
QGLRSGGASRHQGPL
>gi|573008333|emb|CDL68740.1| MHC class II DQA, partial [Ovis aries]
RALILGALALTAMMSPSGSEDIVADHIAAYGVNVYQTYGPSGYYTHEFDGDEEFYVDLEKKETVWHLPVFSQFRRFDPQG
ALRNIATAKHNLEITIQRSNSTAATNKVPEVTVFSKSPMMLGQPNTLICHVDNIFPPVINITWLRNGHSVIEGVSETSFL
SKDDHSFSKISYLTFLPSDDYVYDCKVEHWGLDKPLLKHWEPEIPAPMSELTETVVCALGLTVGLLGIVVGTVLIIRGLR
SGGPSRHQGPL
>gi|86437990|gb|AAI12473.1| BOLA-DQA1 protein [Bos taurus]
MVLNRALILGALTLTTMTSLCGGEDIVADHIGSYGIDFYQSHGPSGQYIHEFDGDEMFYVDLGKKETVWRLPMFGELTGF
DPQGALRNIATEKHNLDILTKCSNFTPVVNEVPEVTVFSKSPVMLGQPNTLICHVDNIFPPVINITWLRNGHSITEGVSE
TSFLIKSDYSFLKIKYLTFLPSDDDIYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLTVGLMGIVVGTVLII
RGLHSSGASRHQGPL
>gi|61744012|gb|AAX55634.1| MHC class II antigen precursor [Bubalus bubalis]
MVLNRALILGALALTTMMSPSGGEDIVADHIGTYGINVYHTYGPSGYYTHEFDGDEQFYVDLEKRETVWRLPVFSKFASF
DPQGALRNIATEKHNLEIMIQRSNSTAATNKVPEVTVFSKSPVMLGQPNTLICHVDNIFPPVINITWLRTGHSVTEGVSE
TSFLIKSDYSFLKIKYLTFLPSDDDIYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLTVGLVGITVGTIFII
QGLRSGDPSRHQGPL
>gi|54695314|emb|CAH62134.1| MHC class II DQ alpha 1 [Canis lupus familiaris]
MILNRVLILGTLILTIMMSPSGGEEIVADHVAYYGINVYQSYGPSGQYTHEFDGDEEFYVDLEKKETVWRLPVFSTFTSF
DPQGALRNLAIIKQNLNILTKRSNQTAATNEVPEVTVFSKSPVMLGQPNTLICLVDNIFPPVINVTWLKNRHSVTEGVSE
TSFLAKGDHSFSKISYLTFLPSAEDIYDCKVEHWGLDEPLLKHWEPEVPTPMSELTETVVCALGLAVGLVGIVMGTVFII
QGLRSGGTSRHQGPL
>gi|589980423|ref|XP_006997447.1| PREDICTED: h-2 class II histocompatibility antigen, I-E alpha chain-like [Peromyscus maniculatus bairdii]
MTPSRALVLGILALTTALSPCGGEDDIKAQHVGSYGIEVYHSYGPNGQYTFEFDGDEEFYVDLDKKETIWRIPEFGQLTS
FDPQGGLQEIAIAKHNLDTMIKESNSTPATNEVPEVTVFPKSPVLLGQPNTLICSVDNIFPPVINITWLRNSKSVTEGVY
ETSFLSNSDHSFHKMAYLTFIPSDDDVYDCKVEHWGLEEPMLKHWEPEVPAPMSELTETVVCALGLSVGIVGIVVGTVFI
IQGLRSGGPSRHPGPL
>gi|573008341|emb|CDL68744.1| MHC class II DQA [Ovis aries]
MVLNRALILGALALTTMMSPSRGEDIVADHVGSYGTDFYQSHGPSGQFTQEFDGDELLYVDLGKKETVWRLPMFSQFADF
DPQGALRNIATAKDTLDILTKRSNSTPVINEVPEVTVFSKSPVMLGQPNTLICHVDNIFPPVINITWLKNGHVVTEGVSE
TSFLPKDDDSFFKFGYLTFLPSDDDVYDCKVEHWGLEEPLLKHWEPEIPAPMSELTETVVCALGLTMGLVGIVVGTIFII
QGLRSGGASRHQGPL
>gi|431916895|gb|ELK16655.1| HLA class II histocompatibility antigen, DR alpha chain [Pteropus alecto]
MSKEQEEALLIPIKPPKKKMAVIGIPMFGFFITVLLMKLQESWAVKENHVIIQAEYYLTPDASAEFMFDFDGDEIFHVDM
KKTETVWRLKEFGDFASFEAQGALANIAVDKANLDIMIKRSNHTPNTNVPPEVTVLPNNPVELGEPNVLICFIDKFSPPV
VNVTWLQNGKPVTTGVSETVFLPREDHLFRKFHYLPFLPSTEDVYDCKVEHWGLDEPLLKHWEFEARTPLPETKENVVCA
LGLVVGLVGIIVGTIFIIKGVRKGNAVERRGPL
>gi|556723594|ref|XP_005957615.1| PREDICTED: mamu class II histocompatibility antigen, DR alpha chain-like isoform X1 [Pantholops hodgsonii] >gi|556723596|ref|XP_005957616.1| PREDICTED: mamu class II histocompatibility antigen, DR alpha chain-like isoform X2 [Pantholops hodgsonii]
MAITRVPILGIFITVLISLQESWAIKEDHVIIQAEFYLNPEQSAEFMFDFDGDEIFHVDMQKKETVWRLPEFGHFASFEA
QGALANMAVMKANLDIMIKRSNNTPNTNVPPEVTLLPNKPVELGEPNTLICFIDKFSPPVISVTWLRNGKPVTDGVSQTV
FLPRDDHLFRKFHYLPFLPTTEDVYDCKVEHWGLNEPLLKHWEYEAPAPLPETTENVVCALGLIVALVGIIAGTIFIIKG
VRKANTVEGRGPL
>gi|29124704|gb|AAO63758.1| MHC class II antigen [Sus scrofa]
MVPGRVLMWGALALTAVMSACGGEDIAADHVASYGLNVYQSYGPSGYYTHEFDGDEEFYVDLEKKETVWQLPLFRKFRSF
DPQGALRNIATLKHNLNIVTKRSNNTAAVNKVPEVTVFSKSPVILGQPNTLICHVDSIFPPVINITWLKNGHSVTEGFSE
TSFLSRNDHSFLKISYLTFLPSDDDFYDCKVEHWGLDKPLLKHWEPEIPAPMSELTETVVCALGLIVGLVGIVVGTVFII
QGLRSGGPSRHQGSL
>gi|556723608|ref|XP_005957622.1| PREDICTED: SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like isoform X2 [Pantholops hodgsonii]
MVLNRALILGALALTTMMSPSGGEDIVADHVGSYGTTIYQSHGPSGQFTQEFDRDELFYVDLEKKETVWRLPMFSQFAGF
DPQGALSNIATVKHNLDIMTKWYNFTPVINEVPEVTVFSKSPVMLGQPNTLICHVDNIFPPVINITWLKNGHAVTEGVSE
TSFLPKDDDSFFRFGYLTFLPSDDDVYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETLVCALGLTVGLVGIVVGTIFII
QGLRSGGASRHQGPL
>gi|558208275|ref|XP_006107083.1| PREDICTED: SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like [Myotis lucifugus]
MTLNRALIWGAFALTTVLGRCGGEDIVADHVAAYGASFYQSYGPSGQYTFEFDGDEMFYVDLEKKETVWRLPGLSEFGGF
DPQGGLRNMATAEYNLDILIKRSNSTAAINEVPEVTMLPKSPVELGQPNTLICAVDNIFPPVINISWLSNGHSVTQGVSE
TSFLSKRDHSFLKISYLTFLPSADDIYDCKVEHWGLDQPLLKHWEPKIPASMSELTETVVCALGLAMGLVGIVTGTVFII
QGLRPGGASRHQEPL
>gi|1542855|emb|CAA69205.1| DQA [Bos taurus]
MILNRALIWGALALTTMMGPSGSEDIVADHIGAYGINVYHTYGPSGYYTHEFDGDEEFYVDLEKRETVWRLPVFSKFTSF
DPQGALRNIATAKHNLEVLIQRSNSTAATNKVPEMTVFPKSPVMLGQPNTLICHVDNIFPPVINITWLRNGHLVIEGISD
TSFLSKDDHSFAKISYLTFLPSDDDVYDCKVEHWGLDKPLLKHWEPEIPAPMSELTETVVCALGLTVGLVGIVVGTVLII
RGLRSGGPSRHQGPL
>gi|634877387|ref|XP_007949491.1| PREDICTED: HLA class II histocompatibility antigen, DQ alpha 2 chain-like isoform X1 [Orycteropus afer afer]
MILNEALILGVLALTTMMSTCESEDIVADHVASYGTTVYQSYGPNGQYTHDFDGDEQFYVDLDKKQTVWQLPLFSKLLSF
DPQGGLRNIAVGKYNLDLLTKYYNFTAATNEVPEVTVFPKSFVELGHPNVLICLVDNIFPPVINITWLSNGHSVTEGVTE
TNFLPKSDHSFHKISYLTFLPSADDIYDCKVEHWGLDEPLLKHWEPEIPTPMSELTETVVCALGLAVGLVGIVVGTILII
RGLRSGGASRHQGPL
>gi|664771812|ref|XP_008505103.1| PREDICTED: HLA class II histocompatibility antigen, DQ alpha 2 chain-like [Equus przewalskii]
MILNRALILGALTLTTMMSACGGEDIVADHIGSYGITIYELSGPSGQYNFEFDGDETFYVDLEKKETIWRLPEFSKFARF
DPQGALESIATIKHNLDIMIKRTNSTPATNEVPEVTVFSKSPVMLGQPNTLICLADNIFPPVINVTWLKNGHSVTEGIYE
TSFLIKNDYSFFKISYLTFLPSADDIYDCKVEHWGLDEPLLKHWEPEIPTPMSELTETVVCALGLAVGLVGIAVGTFLII
RALRSGGALRRQGCL
>gi|386952|gb|AAA36314.1| MHC HLA-SX-alpha, partial [Homo sapiens]
MSGVIKLPRVYVFCDWLPADHVSTYARFVQTHRPSGEYMFEFDEEEQFYVNLDEKEMVWPLPEFIHTFDFGAQRGIAGIV
MARKHLNTRIXWSKQTWATNAPTEVSVFPKEPVDLGQPNTLVCHVDKFFPPVLNITWLCNGEPVIEGIAETIFLPSKKLR
FHRFHYLTLVPMAEDTCDLQGEHWGLHQPLLRHREVHELIQVPETMEMLVCALGLLVGLAGVLNGTIVSXKTKRSXQHPR
VQGLL
>gi|426250463|ref|XP_004018956.1| PREDICTED: SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like [Ovis aries] >gi|573008339|emb|CDL68743.1| MHC class II DQA [Ovis aries]
MVLNRALILGALALTTMMSPSGGEDIVADHVGTYGAEFYQSHGPSSEYTQEFDEDELLYVDLEKKETVWRLPMFGQFAGF
HIQVALSNIATAKHNLDVMTKWYNFTPVINEVPEVTVFSKSPVMLGQPNTLICHVDNIFPPVINITWLKNGHAVTKGVYE
TSFLPKDDHSFFKFGYLTFLPSDDDVYDCKVEHWGLEEPLLKHWEPEIPAPMSELTETVVCALGLTMGLVGIVVGTIFII
QGLRSGGASRHQGPL
>gi|393809071|gb|AFN25706.1| MHC class II antigen [Ovis aries]
MILNRALILGALALTAMMNPSGSEDIVADHIGTYGVNVYQTYGPSGYYTHEFDGDEQFYVDLEKRETVWRLPMFSKFGDF
DPQFALRNIATLKHNLELIIQRSNSTAATNKVPEVTVFSKSPMMLGQPNTLICHVDNIFPPVINITWLRNGHSVIEGVSA
TSFLSKDDYSFSKISYLTFLPSDDDVYDCKVEHWGLDEPLLKHWEPEIPAPMSELTESVVCALGLTMGLVGIVVGTVLII
RGLRSGGPSRHQGPL
>gi|426250467|ref|XP_004018958.1| PREDICTED: SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like [Ovis aries]
MVLNRALILGALALTTMMSPSRGEDIVADHIAAYGINVYHSYGPSGYYTHEFDGDEQFYVDLEKKETVWRLPEFSKFTSF
DPQGALRNMASGKQTLEIMIQRSNSTAATNKVPEVTVFSKSPVMLGQPNTLICHVDNIFPPVINITWLKNGHVVTEGVSE
TSFLPKDDDSFFKFGYLTFLPSDDDVYDCKVEHWGLEEPLLKHWEPEIPAPMSELTETVVCALGLTMGLVGIVVGTIFII
QGLRSGGASRHQGPL
>gi|511926669|ref|XP_004782452.1| PREDICTED: SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like [Mustela putorius furo] >gi|512021684|ref|XP_004828064.1| PREDICTED: SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like [Mustela putorius furo]
MEKRMTLSRVLILGTLALTTMMSPGGSEDIVADHVGSYNIEVYQSYGPSGQSTQEFDGDEEFYVDLEKKETVWRLPVFST
FASYDPQGSLGNLAIAKQNLNILTKSSNYTAATNEVPEVTVFPKSPVSLGQPNTLICLVDNIFPPVINVTWLKNRHSVTE
GVSETRFLARKDHSFLMFSYLTFLPSADDIYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGT
VFIIQGLRSSGASRHQGPL
>gi|76446368|gb|ABA42970.1| MHC class II antigen alpha chain [Sus scrofa]
MVPGRVLMWGALALTAVMSACGGEDIAADHVASYGLHVYQSYGPSGYYTHEFDGDEQFYVDLEKKETVWQLPLFSKFTSF
DPQGALRNIATSKYNLNVMIKQSNNTAAVNQVPEVTVFPKSPVILGQPNTLICHVDSIFPPVINITRLKNGHSVTEGFSE
TSFLSRNDHSFLKISYLTFLPSDDDFYDCKVEHWGLDKPLLKHWEPEIPAPMSELTETVVCALGLIVGLVGIVVGTVLVI
RGLRSGGLSRHQGSL
>gi|664781234|ref|XP_008509937.1| PREDICTED: SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like [Equus przewalskii] >gi|664781236|ref|XP_008509938.1| PREDICTED: SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like [Equus przewalskii]
MILNRALILGALTLTTMMSACGGEDIVADHFASYGTSVYQSYGAFGQYTHEFDGDEQFHVDLEKKETVWRLPEFGEFTSF
DPQGGLREVATAKHNLEVLIELSNSTAATNEVPEVTVFPKSPVMLGQPNTLICLVDNVFPPVINVTWLRNGHSVTEGVFE
MSFLPKTDDSFLKISYLTFLPSADDIYDCKVEHWGLDEPLLKHWEPEIPTPMSELTETVVCALGLAVGFVGIVVGTFLII
RGLRSGGALRRQGCL
>gi|52854418|gb|AAU88246.1| MHC class II antigen [Bos taurus] >gi|392514687|gb|AFM77730.1| MHC class II antigen [Bos grunniens x Bos taurus]
MVLNRALILGALALTTMMSPSGSEDIVADHIGAYGINVYHTYGPSGYFTHEFDGDEEFYVDLEKRETVWNLPLFSKFRRF
DPQGALRNIATVKHNLEIVIQRSNSTAATNKVPEVTVFSKSPMMLGQPNTLICHVDNIFPPVINITWLKNGHLVIEGISE
TSFLSKDDHSFSKISYLAFLPSDDDVYDCKVEHWGLDKPLLKHWEPDIPAPMSELTETVVCALGLTVGLVGIVVGTVLII
RGLRSGGPSRHQGPL
>gi|391224611|gb|AFM37578.1| MHC class II antigen [Bos grunniens]
MVLNRALIWGALALTTMMGPSGSEDIVADHIGAYGINVYHTYGPSGYYTHEFDGDEEFYVDLEKRETVWRLPVFSKFTSF
DPQGALRNIATTKHNLEIMIRRSNSTAATNKVPEMTVFPKSPVMLGQPNTLICHVDNIFPPVINITWLRNGHLVIEGISE
TSFLSKDDHSFAKISYLTFLPSDDDVYDCKVEHWGLDKPLLKHWEPEIPAPMSELTETVVCALGLTVGLVGIVVGTVLII
RGLRSGGPSRHQGPL
>gi|545838801|ref|XP_005665901.1| PREDICTED: SLA class II histocompatibility antigen, DQ haplotype D alpha chain isoform X1 [Sus scrofa]
MVPGRVLMWGALALTALMSACGADHVASYGLNVYQSYGPSGYYTHEFDGDEEFYVDLGKKETVWQLPLFSKFRSFDPQGA
LRNIATAKHNLNILIKRSNNTAAVNQVPEVTVFPKSPVMLGQPNTLICHVDNIFPPVINITWLKNGHSVTEGFSETSFLS
KNDHSFLKISYLTFLPSDDDFYDCKVEHWGLDKPLLKHWEPEIPAPMSELTETVVCALGLIVGLVGIVVGTVFIIQGLRS
GGPSRHQGSL
>gi|586544736|ref|XP_006907484.1| PREDICTED: HLA class II histocompatibility antigen, DR alpha chain-like [Pteropus alecto]
MAVIGIPMFGFFITVLLMKLQESWAVKENHVIIQAEYYLTPDASAEFMFDFDGDEIFHVDMKKTETVWRLKEFGDFASFE
AQGALANIAVDKANLDIMIKRSNHTPNTNVPPEVTVLPNNPVELGEPNVLICFIDKFSPPVVNVTWLQNGKPVTTGVSET
VFLPREDHLFRKFHYLPFLPSTEDVYDCKVEHWGLDEPLLKHWEFEARTPLPETKENVVCALGLVVGLVGIIVGTIFIIK
GVRKGNAVERRGPL
>gi|1536891|emb|CAA69155.1| major histocompatability complex class II [Bos taurus]
MVLNRALILGALALTTMMSPNGGEDIVADHVGSYGTEIYQSHGPSGQYTQEFDGDEMFYVDLGKKETVWRLPMFSQFAGF
DPQAALSEIATSKHNLDVLTKRSNFTPVINEVPEVTVFSKSPVILSQPNTLICHVDNIFPPVINITWLKNGHAVTEGVSE
TSFLPKDDHSFLKIGYLTFLPSDNDIYDCKVEHWGLDEPLLKHWEPEVPAPMSELTETVVCALGLTVGLVGIVVGTIFII
QGLRSGGTSRHQGPL
>gi|58801557|ref|NP_001011726.1| major histocompatibility complex, class II, DQ alpha precursor [Canis lupus familiaris] >gi|1208551|gb|AAA90958.1| MHC class II DLA DQalpha chain [Canis lupus familiaris]
MILNRVLILGTLILTIMMSPSGGEEIVADHVANYGINVYQSYGPSGQYTHEFDGDEEFYVDLEKKETVWRLPVFSTFRSF
DPQGALRNLAIIKQNLNIMTKRSNQTAATNEVPEVTVFSKSPVMLGQPNTLICLVDNIFPPVINVTWLKNRHSVTEGVSE
TSFFAKGDHSFSKISYLTFLPSAEDIYDCKVEHWGLDEPLLKHWEPEVPTPMSELTETVVCALGLAVGLVGIVMGTVFII
QGLRSGGTSRHQGPL
>gi|371444176|gb|AEX28226.1| MHC class II antigen, partial [Ovis canadensis] >gi|371444182|gb|AEX28229.1| MHC class II antigen, partial [Ovis canadensis] >gi|371444190|gb|AEX28233.1| MHC class II antigen, partial [Ovis canadensis]
MAITRVPILGLFITVLISLQESWAIKEDHVIIQAEFYLNPEESAEFMFDFDGDEIFHVDMQKKETVWRLPEFGRFASFEA
QGALANMAVMKANLDIMIKRSNNTPNTNVPPEVTLLPNKPVELGEPNTLICFIDKFSPPVISVTWLRNGIPVTDGVSQTV
FLPRDDHLFRKFHYLPFLPTTEDVYDCKVEHWGLNEPLLKHWEYEAPAPLPETTENAVCALGLIVALVGIIAGTIFIIKG
VRKANTVEGRGPL
>gi|573008343|emb|CDL68745.1| MHC class II DQA [Ovis aries]
MVLNRALILGALALTTMMSPSGGEDIVADHVGSYGTEIYQSHGPSGQYTMESDGDELFYVDLEKKETVWRLPMFGELTSF
DPQGALSEIAKAKQNLDILTKLSNFTPVINEVPEVTVFSKSPVMLGQPNTLICHVDNIFPPVINITWLKNGHAVTEGVYE
TSFLPKDDDSFFKFGYLTFLPSDDDIYDCKVEHWGLEEPLLKHWEPEIPAPMSELTETVVCALGLTVGLVGIVVGTIFII
QGLRSGGASRHQGPL
>gi|593759824|ref|XP_007118658.1| PREDICTED: HLA class II histocompatibility antigen, DR alpha chain-like [Physeter catodon]
MAIIGVPIPGFFITVLIGLQESWAITEDHVIIQAEFSLAPDQSSEFMFDFDGDEIFHVDLEKKETVWRLKEFGNFASFQA
QGALANIAVGKANLDILIKRSNHTPNTNVPPEVTVLSNTPVELGEPNILICFIDKFSPPVINVTWLQNGKPVTTGVSETV
FLPRDDHLFRKFHYLPFVPSTEDVYDCKVEHWGLEEPLLKHWEYEAPTPLPETTENVVCALGLIVALVGIVIGTIFIIKG
VRKGNVVEHRGPL
>gi|309400316|gb|ADO79584.1| MHC class II antigen [Microcebus murinus]
PVLGFLIMAVLMNPQESWAIKEEHVIIQAEFYLGPDQSGEFMFDFDGDEIFHVDMDKRETVWRLEEFGRFASFEAQGALA
NIAVDKANLDIMMKRSNHTPNTNVPPEVTVLTNAPVELGEPNVLICFIDKFSPPVVKVTWLQNGKPVTTGVSETVFLPRE
DHLFRKFHYLPFLPSTEDFYDCKVEHLSLDEPLIKHWEFDVPTPLPETTENVVCALGLVVGLVGIVAGTVLIVKGVRKGN
ATERRGPL
>gi|58339341|gb|AAW70584.1| MHC class II antigen precursor [Bos taurus]
MVLNRALILGALALTTMMSSSGGEDIVADHVGSYGTEIYQSHGPSGQYTQEFDGDEMFYVDLGKKETVWRLPMFSQFAGF
DPQFALSEIATAKFNLDLLTKRSNFTPVINEVPEVTVFSKSPVMLGQPNTLICHVDNIFPPVINITWLKNGHAVTEGVSE
TSFLPKDDHSFLKIGYLTFLPSDNDIYDCKVEHWGLDEPLLKHWEPEVPAPMSELTETVVCALGLTVGLVGIVVGTIFII
QGLRSGGASRHQGPL
>gi|49640036|emb|CAE52545.1| MHC class II antigen [Macaca mulatta] >gi|215541011|emb|CAP40272.1| MHC class II antigen [Macaca mulatta] >gi|397174462|dbj|BAM34466.1| MHC class II antigen [Macaca fascicularis]
MAISGVPVLGFFIIAVLMSAQESWAIKEEHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFE
AQGALANIAVDKANLEIMTKRSNNTPITNVPPEVTVLTNSPVELGEPNVLICFIDKFSPPVVKVTWLKNGKPVTTGVSET
VFLPREDHLFRKFHYLPFLPSTEDIYDCKVEHWGLDAPLLKHWEFDAPSPLPETTENVVCALGLIVGLVGIIVGTVFIIK
GVRKSNAAECRGPL
>gi|49640030|emb|CAE52542.1| MHC class II antigen [Macaca mulatta] >gi|187264171|emb|CAQ15940.1| MHC class II DR alpha chain [Macaca fascicularis] >gi|193227765|emb|CAP39912.1| MHC class II antigen [Macaca mulatta] >gi|197365547|gb|ACH70268.1| MHC class II antigen [Macaca mulatta] >gi|337272888|gb|AEI70204.1| MHC class II antigen [Macaca fascicularis] >gi|337272890|gb|AEI70205.1| MHC class II antigen [Macaca fascicularis] >gi|337272896|gb|AEI70208.1| MHC class II antigen [Macaca fascicularis] >gi|338177027|gb|AEI83912.1| MHC class II antigen [Macaca fascicularis] >gi|345498597|emb|CBX53577.1| MHC class I antigen [Macaca fascicularis] >gi|345498599|emb|CBX53578.1| MHC class I antigen [Macaca fascicularis] >gi|345498607|emb|CBX53582.1| MHC class I antigen [Macaca fascicularis] >gi|345498615|emb|CBX53586.1| MHC class I antigen [Macaca fascicularis] >gi|355561572|gb|EHH18204.1| hypothetical protein EGK_14758 [Macaca mulatta] >gi|511630392|emb|CCW28359.1| MHC class II antigen [Macaca nemestrina] >gi|511630394|emb|CCW28360.1| MHC class II antigen [Macaca nemestrina] >gi|526250633|emb|CCQ71709.1| MHC class II antigen [Macaca mulatta] >gi|548932562|emb|CCW28347.1| MHC class II antigen [Macaca fascicularis]
MAVSGVPVLGFFIIAMLMSAQESWAIKEEHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFE
AQGALANIAVDKANLEIMTKRSNNTPITNVPPEVTVLTNSPVELGEPNVLICFIDKFSPPVVKVTWLKNGKPVTTGVSET
VFLPREDHLFRKFHYLPFLPSTEDIYDCKVEHWGLDAPLLKHWEFDAPSPLPETTENVVCALGLIVGLVGIIVGTVFIIK
GVRKSNAAERRGPL
>gi|90819618|gb|ABD98454.1| MHC class II antigen precursor [Bubalus bubalis]
MVLNRALILGALALTTMMSPSGGEDIVADHVGSYGTEIYQSHGPSGQYTQEFDGDEMFYVDLGKKETVWRLPMFSQFAGF
DPQAALSEIATSKHNLDVLTKRSNFTPVINEVPEVTVFSKSPVMLGQPNTLICHVDNIFPPVINITWLKNGHSVTEGVSE
TSFLSKDDHSFLKIGYLTFLPSDDDVYDCKVEHWGLDEPLLKHWEPEVPAPMSELTETVVCALGLTVGLVGIVVGTIFII
QGLRSGGASRHQGPL
>gi|393809067|gb|AFN25704.1| MHC class II antigen [Ovis aries]
MAITRVPILGLFITVLISLQESWAIKEDHVIIQAEFYLNPEESAEFMFDFDGDEIFHVDMQKKETVWRLPEFGHFASFEA
QGALANMAVMKANLDIMIKRSNNTPNTNVPPEVTLLPNKPVELGEPNTLICFIDKFSPPVISVTWLRNGIPVTDGVSQTV
FLPRDDHLFRKFHYLPFLPATEDVYDCKVEHWGLNEPLLKHWEYEAPAPLPETTENAVCALGLIVALVGIIAGTIFIIKG
VRKANTVEGRGPL
>gi|197209864|ref|NP_001127770.1| major histocompatibility complex, class II, DR alpha precursor [Macaca mulatta] >gi|545688802|ref|NP_001270278.1| mamu class II histocompatibility antigen, DR alpha chain-like precursor [Macaca fascicularis] >gi|49640016|emb|CAE52535.1| MHC class II antigen [Macaca mulatta] >gi|49640018|emb|CAE52536.1| MHC class II antigen [Macaca mulatta] >gi|49640020|emb|CAE52537.1| MHC class II antigen [Macaca mulatta] >gi|49640022|emb|CAE52538.1| MHC class II antigen [Macaca mulatta] >gi|49640024|emb|CAE52539.1| MHC class II antigen [Macaca mulatta] >gi|49640026|emb|CAE52540.1| MHC class II antigen [Macaca mulatta] >gi|49640028|emb|CAE52541.1| MHC class II antigen [Macaca mulatta] >gi|125489018|gb|ABN42670.1| MHC class II antigen DR alpha chain [Macaca fascicularis] >gi|187264169|emb|CAQ15939.1| MHC class II DR alpha chain [Macaca fascicularis] >gi|193227767|emb|CAP40273.1| MHC class II antigen [Macaca mulatta] >gi|193227769|emb|CAP40274.1| MHC class II antigen [Macaca mulatta] >gi|193227771|emb|CAP40275.1| MHC class II antigen [Macaca mulatta] >gi|193227773|emb|CAP40276.1| MHC class II antigen [Macaca mulatta] >gi|193227775|emb|CAP40277.1| MHC class II antigen [Macaca mulatta] >gi|193227777|emb|CAP40278.1| MHC class II antigen [Macaca mulatta] >gi|193227779|emb|CAP40279.1| MHC class II antigen [Macaca mulatta] >gi|193227781|emb|CAP40280.1| MHC class II antigen [Macaca mulatta] >gi|193227783|emb|CAP40281.1| MHC class II antigen [Macaca mulatta] >gi|193227785|emb|CAP40282.1| MHC class II antigen [Macaca mulatta] >gi|193227787|emb|CAP40283.1| MHC class II antigen [Macaca mulatta] >gi|193227789|emb|CAP40284.1| MHC class II antigen [Macaca mulatta] >gi|337272884|gb|AEI70202.1| MHC class II antigen [Macaca fascicularis] >gi|338177021|gb|AEI83909.1| MHC class II antigen [Macaca fascicularis] >gi|345498603|emb|CBX53580.1| MHC class I antigen [Macaca fascicularis] >gi|345498605|emb|CBX53581.1| MHC class I antigen [Macaca fascicularis] >gi|345498609|emb|CBX53583.1| MHC class I antigen [Macaca fascicularis] >gi|355748449|gb|EHH52932.1| hypothetical protein EGM_13471 [Macaca fascicularis] >gi|511630376|emb|CCW28351.1| MHC class II antigen [Macaca mulatta] >gi|511630382|emb|CCW28354.1| MHC class II antigen [Macaca nemestrina] >gi|511630384|emb|CCW28355.1| MHC class II antigen [Macaca nemestrina] >gi|512123735|emb|CCW28339.1| MHC class II antigen [Macaca fascicularis] >gi|548932554|emb|CCW28343.1| MHC class II antigen [Macaca fascicularis] >gi|671708755|gb|AII81894.1| MHC class II antigen [Macaca nemestrina] >gi|671708757|gb|AII81895.1| MHC class II antigen [Macaca nemestrina]
MAISGVPVLGFFIIAVLMSAQESWAIKEEHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFE
AQGALANIAVDKANLEIMTKRSNNTPITNVPPEVTVLTNSPVELGEPNVLICFIDKFSPPVVKVTWLKNGKPVTTGVSET
VFLPREDHLFRKFHYLPFLPSTEDIYDCKVEHWGLDAPLLKHWEFDAPSPLPETTENVVCALGLIVGLVGIIVGTVFIIK
GVRKSNAAERRGPL
>gi|220981784|emb|CAX17684.1| MHC class II antigen [Ovis aries]
MAITRVPILGLFITVLISLQESWAIKEDHVIIQAEFYLNPEESAEFMFDFDGDEIFHVDMQKKETVWRLPEFGHFASFEA
QGALANMAVMKANLDIMIKRSNNTPNTNVPPEVTLLPNKPVELGEPNTLICFIDKFSPPVISVTWLRNGIPVTDGVSQTV
FLPRDDHLFRKFHYLPFLPTTEDVYDCKVEHWGLNEPLLKHWEYEAPAPLPETTENAVCALGLIVALVGIIAGTIFIIKG
VRKANTVEGRGPL
>gi|49640032|emb|CAE52543.1| MHC class II antigen [Macaca mulatta] >gi|49640034|emb|CAE52544.1| MHC class II antigen [Macaca mulatta] >gi|125489016|gb|ABN42669.1| MHC class II antigen DR alpha chain [Macaca fascicularis] >gi|193227791|emb|CAP40285.1| MHC class II antigen [Macaca mulatta] >gi|193227793|emb|CAP40286.1| MHC class II antigen [Macaca mulatta] >gi|193227795|emb|CAP40287.1| MHC class II antigen [Macaca mulatta] >gi|193227797|emb|CAP40288.1| MHC class II antigen [Macaca mulatta] >gi|259027676|gb|ACV91099.1| MHC class II antigen [Macaca mulatta] >gi|337272886|gb|AEI70203.1| MHC class II antigen [Macaca fascicularis] >gi|338177023|gb|AEI83910.1| MHC class II antigen [Macaca fascicularis] >gi|338177029|gb|AEI83913.1| MHC class II antigen [Macaca fascicularis] >gi|345498601|emb|CBX53579.1| MHC class I antigen [Macaca fascicularis] >gi|511630372|emb|CCW28349.1| MHC class II antigen [Macaca mulatta] >gi|511630396|emb|CCW28361.1| MHC class II antigen [Macaca nemestrina] >gi|526250635|emb|CCQ71710.1| MHC class II antigen [Macaca mulatta] >gi|526250637|emb|CCQ71711.1| MHC class II antigen [Macaca mulatta] >gi|526250639|emb|CCQ71712.1| MHC class II antigen [Macaca mulatta] >gi|526250643|emb|CCQ71714.1| MHC class II antigen [Macaca mulatta] >gi|526250645|emb|CCQ71715.1| MHC class II antigen [Macaca mulatta] >gi|671708753|gb|AII81893.1| MHC class II antigen [Macaca nemestrina]
MAESGVPVLGFFIIAVLMSAQESWAIKEEHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFE
AQGALANIAVDKANLEIMTKRSNNTPITNVPPEVTVLTNSPVELGEPNVLICFIDKFSPPVVKVTWLKNGKPVTTGVSET
VFLPREDHLFRKFHYLPFLPSTEDIYDCKVEHWGLDAPLLKHWEFDAPSPLPETTENVVCALGLIVGLVGIIVGTVFIIK
GVRKSNAAERRGPL
>gi|125489020|gb|ABN42671.1| MHC class II antigen DR alpha chain [Macaca fascicularis] >gi|193227799|emb|CAP40289.1| MHC class II antigen [Macaca mulatta] >gi|337272892|gb|AEI70206.1| MHC class II antigen [Macaca fascicularis] >gi|337272894|gb|AEI70207.1| MHC class II antigen [Macaca fascicularis] >gi|511630400|emb|CCW28363.1| MHC class II antigen [Macaca nemestrina] >gi|511630402|emb|CCW28364.1| MHC class II antigen [Macaca nemestrina] >gi|526250647|emb|CCQ71716.1| MHC class II antigen [Macaca mulatta] >gi|671708759|gb|AII81896.1| MHC class II antigen [Macaca nemestrina] >gi|671708761|gb|AII81897.1| MHC class II antigen [Macaca nemestrina]
MAASGVPVLGFFITAVLMSAQESWAIKEDHVIIQAEFYLNPDQSGEYMFDFDGDELFHVDMAKKETVWRLEEFGRFASFE
AQGALANIAVDKANLEIMTKRSNNTPITNVPPEVTVLTNSPVELGEPNVLICFIDKFSPPVVKVTWLKNGKPVTTGVSET
VFLPREDHLFRKFHYLPFLPSTEDIYDCKVEHWGLDAPLLKHWEFDAPSPLPETTENVVCALGLIVGLVGIIVGTVFIIK
GVRKSNAAERRGPL
>gi|371444192|gb|AEX28234.1| MHC class II antigen, partial [Ovis canadensis]
MAITRVPILGLFITVLISLQESWAIKEDHVIIQAEFYLNPEESAEFMFDFDGDEIFHVDMQKKETVWRLPEFGRFASFEA
QGALANMAVMKANLDIMIKRSNNTPNTNVPPEVTLLPNKPVELGEPNTLICFTDKFSPPVISVTWLRNGIPVTDGVSQTV
FLPRDDHLFRKFHYLPFLPTTEDVYDCRVEHWGLNEPLLKHWEYEAPAPLPETTENAVCALGLIVALVGIIAGTIFIIKG
VRKANTVEGRGPL
>gi|345498613|emb|CBX53585.1| MHC class I antigen [Macaca fascicularis] >gi|345498617|emb|CBX53587.1| MHC class I antigen [Macaca fascicularis] >gi|511630370|emb|CCW28348.1| MHC class II antigen [Macaca mulatta] >gi|511630378|emb|CCW28352.1| MHC class II antigen [Macaca mulatta] >gi|511630388|emb|CCW28357.1| MHC class II antigen [Macaca nemestrina] >gi|511630390|emb|CCW28358.1| MHC class II antigen [Macaca nemestrina] >gi|526250641|emb|CCQ71713.1| MHC class II antigen [Macaca mulatta]
MAVSGVPVLGFFIIAVLMSAQESWAIKEEHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFE
AQGALANIAVDKANLEIMTKRSNNTPITNVPPEVTVLTNSPVELGEPNVLICFIDKFSPPVVKVTWLKNGKPVTTGVSET
VFLPREDHLFRKFHYLPFLPSTEDIYDCKVEHWGLDAPLLKHWEFDAPSPLPETTENVVCALGLIVGLVGIIVGTVFIIK
GVRKSNAAERRGPL
>gi|229331975|ref|NP_001153231.1| histocompatibility complex, class II, DQ alpha, type 1 precursor [Ovis aries] >gi|165996|gb|AAA16568.1| MCH OVAR-DQ-ALPHA1 [Ovis aries]
MILNRALILGALALTAMMNPSGSEDIVADHIGTYGVNVYQTYGPSGYFTHEFDGDEQFYVDLEKRETVWRLPMFSKFGDF
DPQFALRNIRTLKHNLELIIQRSNSTAATNKVPEVTVFSKSPMMLGQPNTLICHVDNIFPPVINITWLRNGHSVIEGVSA
TSFLSKDDYSFSKISYLTFLPSDDDVYDCKVEHWGLDEPLLKHWEPEIPAPMSELTESVVCALGLTMGLVGIVVGTVLII
RGLRSGGPSRHQGPL
>gi|634877393|ref|XP_007949493.1| PREDICTED: HLA class II histocompatibility antigen, DR alpha chain [Orycteropus afer afer]
MAQTGLPVVGFFLMAVLMNSQKSWAIKEDHVIIQAEFYQTPDESGEFMFDFDGDEIFHVNMEKKETVWRLEEFGRFASFE
AQGALANIAVDKANLDIMMKRSNYTPIVNESPEVTLLVNSPAEVGQPNVLICFVDKFTPPVLNVTWLKNGKPVTTGVSET
VFLPREDHLFRKFYYLPFLPSTDDYYDCQVDHWGLDKPLLKHWELEMPTPLPETTETLVCILGLVVGLLGIIVGTILIIK
GTRKGNAVERHGPL
>gi|1208573|gb|AAA93310.1| DLA-DQ alpha [Canis lupus familiaris]
MILNRVLILGTLILTIMMSPSGGEEIVADHVANYGINVYQSYGPSGQYTHEFDGDEEFYVDLEKKETVWRLPVFSTFRSF
DPQGALRNLAIIKQNLNIMTKRSNQTAATNGVPEVTVFSKSPVMLGQPNTLICLVDNIFPPVINVTWLKNRHSVTEGVSE
TSFFAKGDHSFSKISYLTFLPSAEDIYDCKVEHWGLDEPLLKHWEPEVPTPMSELTETVVCALGLAVGLVGIVMGTVFII
QGLRSGGTSRHQGPL
>gi|408717174|gb|AFU83033.1| MHC class II antigen [Equus caballus]
MILNRALILGALTLTTMMSACGGEDIVADHFASYGTNVYQSYGDFGQYTHEFDGDEEFHVDLEKKETVWRLPVFSEFTSF
DPQGALQNIATAKYNLDILIKRSNSTAATNEVPEVTVFPKSPVVLGQPNTLICLVDNIFPPVINVTWLRNGHSVSEGVFE
MIFLPKTDDSFLKISYLTFLPSADDIYDCKVEHWGLDEPLLKHWEPEIPTPMSELTETVVCALGLAVGFVGIVVGTFLII
RALRSGGALRRQGCL
>gi|76446356|gb|ABA42964.1| MHC class II antigen alpha chain [Sus scrofa]
MVPGRVLMWGALALTTVMSACGGEDIAADHVASYGLNVYQSYGPSGYFTHEFDGDEEFYVDLEKKETVWRLPLFSKFTSF
DPQGALRNIATLKHNLNIVTKRSNNTAAVNQVPEVTVFSKSPVILGQPNTLICHVDSIFPPVINITWLKNRHSVTEGFSE
TSFLSKNDHSFLKISYLTFLPSDDDFYDCKVEHWGLDKPLLKHWEPEIPAPMSELTETVVCALGLIVGLVGIVVGTVFII
QGLRSGGPSRHQGSL
>gi|528764645|gb|EPY84304.1| major histocompatibility complex, class II, DR alpha precursor [Camelus ferus]
MSHNDSLNLKIFKIQGNVAKANLNRILPSESCTERVRTQEKEHVIIQAEFYLNPDKSGEFMFDFDGDEIFHVDLEKKETV
WRLEEFGRFASFEAQGALANIAVDKANLDIMIKRSNHTPNTNVPPEVTVLPNTRVELGEPNTLICFIDKFSPPVVKVTWL
RNGKPVTTGVSETVFLPRDDHLFRKFHYLTFLPSTEDVYDCKVEHWGLEEPLLKHWEYEAPVPLPETTENTVCALGLVVA
LAGIIVGTALIIKGVRKGNAAERRGPL
>gi|511630374|emb|CCW28350.1| MHC class II antigen [Macaca mulatta]
MAISGVPVLGFFIIAVLMSAQESWAIKEEHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFE
AQGALANIAVDKANLEIMTKRSNNTPITNVPPEVTVLTNSPVELGEPNVLICFIDKFSPPVVKVTWLKNGKPVTTGVSET
VFLPREDHLFRKFHYLPFLPSTEDIYDCKVEHWGLDAPLLKHWEFDAPSPLPETTENVVCALGLIVGLVGIIVGTIFIIK
GVRKSNAAERRGPL
>gi|338177025|gb|AEI83911.1| MHC class II antigen [Macaca fascicularis] >gi|511630380|emb|CCW28353.1| MHC class II antigen [Macaca mulatta] >gi|511630386|emb|CCW28356.1| MHC class II antigen [Macaca nemestrina] >gi|548932556|emb|CCW28344.1| MHC class II antigen [Macaca fascicularis]
MAISGVPVLGFFIIAVLMSAQESWAIKEEHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFE
AQGALANIAVDKANLEIMTKRSNNTPITNVPPEVTVLTNSPVELGEPNVLICFIDKFSPPVVKVTWLKNGKPVTTGVSET
VFLPREDHLFRKFHYLPFLPSTEDIYDCKVEHWGLDVPLLKHWEFDAPSPLPETTENVVCALGLIVGLVGIIVGTVFIIK
GVRKSNAAERRGPL
>gi|166008|gb|AAA31569.1| MHC class II OLA-DQ-alpha [Ovis aries]
DHIGTYGVNIYQTYGPSGYYTHEFDGDEEFYVDLEKRETVWRLPEFSKFTSFDPQGALRNIATVKHNLEILIQRSNSTAA
TNKVPEVTVFSKSPVMLGQPNTLICHVDNIFPPVINITWLRNGHSVTEGVSETSFLIKSDYSFLKINYLTFLPSDDDVYD
CKVEHWGLDEPLLKHWEPEIPVPMSELTETVVCALGLTVGLVGIVVGTVLIIRGLRSGGPSRHQGPL
>gi|548517831|ref|XP_005696583.1| PREDICTED: mamu class II histocompatibility antigen, DR alpha chain-like [Capra hircus]
MAITRVPILGLFITVLISLQELWAIKEDHVIIQAEFYLNPEQSAEFMFDFDGDEIFHVDMQKKETVWRLPEFGRFASFEA
QGALANMAVMKANLDIMIKRSNNTPNTNVPPEVTLLPNKPVELGEPNTLICFIDKFSPPVISVTWLRNGIPVTDGVSQTV
FLPRDDHLFRKFHYLPFLPTTEDVYDCKVEHWGLNEPLLKHWEYEAPAPLPETTENAVCALGLIVALVGIIAGTIFIIKG
VRKANTVEGRGPL
>gi|344252999|gb|EGW09103.1| HLA class II histocompatibility antigen, DO alpha chain [Cricetulus griseus]
MYDIFAQTQKPSGDCVYEFDGDELFYVDLDREETVWGLREFSTVYGFDAQGALPYILSLKDNLRALIQRHNVTQVPSEPP
EVTVFPKNPVELGQPNVLICHIDRFFPPVLNVTWLRNGQLVTEGTSETVFLPSTELRFQKFHYLTFIPTAKDVYDCRVEH
WSLGQPSLSHWEMPEPLQVTETMETVVCALGLVVALVGIVIGSALIIGALHSSHDPRGPGTRVSDCADVAKAPPPTPSVM
VLPVELVLAFHTLISFLNPQGVRAIKADHMGSYGPAFYQSYDASGQFTHEFDGEQIFSVDLKNGEVVWRLPEFGDTQYSN
FQSGLASIAMIRAHLDILVERSNRTRAISVPPRVTVLPKSPVELGKPNVLICIVDDIFPPVINVTWLRNNQPVTKGVAQT
SFYTQPNHRFRKFHYLTFVPWAEDMYDCRVEHWGLEAPLLQHWEPQVLTPPPDTTETLVCGLGLALGFMGFLLGTALIVT
GLSPRSIRRCRSPGSLRVKGGGHECVGEGKSDSVKSRGEKRGG
>gi|594693353|ref|XP_007193950.1| PREDICTED: HLA class II histocompatibility antigen, DR alpha chain-like [Balaenoptera acutorostrata scammoni]
MAIIGVPIPGFFITVLISLQESWAITEDHVIIQAEFSLVPDQSGEFMFDFDGDEIFHVDLERKETVWRLKEFGNFASFQA
QGALANIAVGKANLDIMIKRSNHTPNTNVPPEVTVLSNTPVEEGEPNILICFIDKFSPPAINVTWLQNGKPVTTGVSETV
FLPRNDHLFRKFHYLPFVPSTEDVYDCKVEHWGLEEPLLKHWEYEAPTPLPETTENAVCALGLIVALVGIIVGTIFIIKG
VRKGNTVEHRGPL
>gi|641737627|ref|XP_008159490.1| PREDICTED: SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like [Eptesicus fuscus]
MTLNKALIWGALALTTLLSCCGGEDIVADHVGAYGACFSQSYGPSGQFTHEFDGDEEFYVDQKKRETVWRLPGLSEFGGF
DPQGGLRNMATANFNLDILTKRSNFTAAINEVPEVTVFPKSPVELGQPNTLICAVDNIFPPVINISWLSNGHSVTQGVSE
TSFLSKKDHSFLKISYLTFLPSADDVYDCRVEHWGLDQPLLKHWEPEIPAPMSELTETVVCALGLAVGLVGIVTGTVFII
QGLRPAGASRQQGPL
>gi|548932558|emb|CCW28345.1| MHC class II antigen [Macaca fascicularis]
MAVSGVPVLGFFIIAMLMSAQESWAIKEEHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFE
AQGALANIAVDKANLEIMTKRSNNTPITNVPPEVTVLTNSPVELGEPNVLICFIDKFSPPVVKVTWLKNGKPVTTGVSET
VFLPREDHLFRKFHYLPFLPSTEDIYDCKVEHWGLDAPLLKHWEFDAPSPLPETTENMVCALGLIVGLVGIIVGTVFIIK
GVRKSNAAERRGPL
>gi|345498611|emb|CBX53584.1| MHC class I antigen [Macaca fascicularis] >gi|511630398|emb|CCW28362.1| MHC class II antigen [Macaca nemestrina]
MAESGVPVLGFFIIAVLMSAQESWAIKEEHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFE
AQGALANIAVDKANLEIMTKRSNNTPITNVPPEVTVLTNSPVELGEPNVLICFIDKFSPPVVKVTWLKNGKPVTTGVSET
VFLPREDHLFRKFHYLPFLPSTEDIYDCKVEHWGLDAPLLKHWEFDAPSPLPETTENVVCALGLIVGLVGIIIGTVFIIK
GVRKSNAAERRGPL
>gi|309400320|gb|ADO79586.1| MHC class II antigen [Microcebus murinus]
PVLGFLIMAVLMDPQESWAIKEEHVIIQAEFYLGPDQSGEFMFDFDGDEIFHVDMDKRETVWRLEEFGRFASFEAQGALA
NIAVDKANLDIMMKRSNHTPNNNVPPEVIVLTNAPVELGEPNVLICFIDKFSPPVVKVTWLQNGKPVTTGVSETVFLPRE
DHLFRKFHYLPFLPSTEDFYDCKVEHLGLDEPLLKHWEFDVPTPLPETTENVVCALGLVVGLVGIVAGTVLIVKGVRKGN
ATERRGPL
>gi|397174460|dbj|BAM34465.1| MHC class II antigen [Macaca fascicularis]
MAESGVPVLGFFIIAVLMSAQESWAIKEEHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFE
AQGALANIAVDKANLEIMTKRSNNTPITNVPPEVTVLTNSPVELGEPNILICFIDKFSPPVVKVTWLKNGKPVTTGVSET
VFLPREDHLFRKFHYLPFLPSTEDIYDCKVEHWGLDAPLLKHWEFDAPSPLPETTENVVCALGLIVGLVGIIIGTVFIIK
GVRKSNAAERRGPL
>gi|408717178|gb|AFU83035.1| MHC class II antigen [Equus caballus]
MILNRALILGALTLTTMMSACGGEDIVADHFASYGTNVYQSYGDFGQYTHEFDGDEEFHVDLEKKETVWRLPVFSEFTSF
DPQGALQNIATIKYNLDILIKRSNSTAATNEVPEVTVFPKSPVVLGQPNTLICLVDNIFPPVINITWLRNGHSVSEGVFE
MSFLPKTDDSFLKISYLTFLPSADDMYDCKVEHWGLDEPLLKHWEPEIPTPMSELTETVVCALGLAVGFVGIVVGTFLII
RALRSGGALRRQGCL
>gi|2618609|dbj|BAA23385.1| mhc class II DRA [Capra hircus] >gi|2618611|dbj|BAA23386.1| mhc class II DRA [Capra hircus]
MAITRVPILGLFITVLISLQELWAIKEDHVIIQAEFYLNPEQSAEFMFDFDGDEIFHVDMQKKETVWRLPEFGRFASFEA
QGALANMAVMKANLDIMIKRSNNTPNTNVPPEVTLLPNKPVELGEPNTLICFIDKFSPPVISVTWLRNGIPVTDGVSQTV
FLPRDDHLFRKFHYLPFLPTTEDVYDCKVEHWGLNEPLLKHWEYEAPAPLPETTENAVCALGLIVALVGIIAGTIFIIKG
VRKANTVERRGPL
>gi|408717182|gb|AFU83037.1| MHC class II antigen [Equus caballus]
MILNRALILGALTLTTMMSACGGEDIVADHFASYGTTVYESYGDFGQYTHEFDGDEEFHVDLEKKETVWRLPEFGEFATF
DPQGGLREVATAKHNLDICIKRSNSTAATNEVPEVTVFPKSPVMLGQPNTLICLVDNIFPPVINVTWLRNGHSVTEGVFE
MSFLPKTDDSFLKISYLTFLPSADDIYDCKVEHWGLDEPLLKHWEPEIPTPMSELTETVVCALGLAVGFVGIVVGTFLII
RGLRSGGALRHQGCL
>gi|169139281|gb|ACA48588.1| MHC class II antigen [Sus scrofa]
MVPGRVLMWGALALTAVMSACGGEDIAADHVASYGLNVYQSYGSSGYYIHEFDGDEQFYVDLEKKETVWQLPLFSKFTSF
DPQGALRNIAVGKLTLNILTKRSNNTAAVNKVPEVTVFSKSPVILGQPNTLICHVDSIFPPVINITWLKNGHSVTEGFSE
TSFLSRNDHSFLKISYLTFLPSDDDFYDCKVEHWGLDKPLLKHWEPEIPAPMSELTETVVCALGLIVGLVGIVVGTVLLI
RGLRSGGLSRHQGSL
>gi|426250465|ref|XP_004018957.1| PREDICTED: SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like [Ovis aries]
MVVNRALILGTLALTTMMSPSGGEDIVADHVGSYGISIYQSYGPSGQYTHEFDGDEQFYVDLEKKETVWQLPLFSRMLSF
DPQGALRNIAVMKLHVDFLTKFSNSTAATNKVPEVTVFSKSPVMLGQPNTLICHVDNIFPPVINITWLRNGHSVTEGVSQ
TSFLIKSDYSFLKINYLTFLPSDDDIYDCKVEHWGLDEPVLKHWEPEIPAPMSELTETVVCALGLTVGLVGIMVGTIFIV
QGLRSGDPSRHQGPL
>gi|560959497|ref|XP_006202202.1| PREDICTED: SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like isoform X2 [Vicugna pacos]
MILNRALILGVLTLTTIMSPCGADHVASYGVNVYQSYGPSGQYTHEFDGDEQFYVDLEKKETVWQLPVFSKFTSFDPQGA
LRNLDVGKHNLDIMIKRSNSTAATNEVPEVTVFPKAPVMLGQPNTLICHVDNIFPPVISITWLRNGRSVTEGVSETSFLS
KNDHSFLKISYLTFLPSDDDIYDCKVEHWGLDEPLLKHWEPEIPTPMSELTETVVCALGLTMGLIGIVVGTVFIIQGLRS
GAPSRHQGPL
>gi|343170760|gb|AEL97642.1| major histocompatibility complex class II DQ alpha 2 [Bos taurus]
MVLNRALILGALALTTMMSSSGGEDIVADHVGSYGTEIYQSHGPSGQYTQEFDGDEMFYVDLGKKETVWRLPMFSQFAGF
DPQFALSEIATAKFNLDLLTKRSNFTPVINEVPEVTVFSKSPVMLGQPNTLICHVDNIFPPAINITWLKNGHAVTEGVSE
TSFLPKDDHSFLKIGYLTFLPSDNDIYDCKVEHWGLDEPLLKHWEPEVPAPMSELTETVVCALGLTVGLVGIVVGTIFII
QGLRSGGASRHQGPL
>gi|600971545|emb|CDO19487.1| MHC class II antigen [Macaca mulatta]
MAVSGVPVLGFFIIAVLMSAQESWAIKEEHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFE
AQGALANIAVDKANLEIMTKRSNNTPITNVPPEVTVLTNSPVELGEPNVLICFIDKFSPPVVKVTWLKNGKPVTTGVSET
VFLPREDHLFRKFHYLPFLPSTEDIYDCKVEHWGLDAPLLKHWEFDAPSPLPETTENMVCALGLIVGLVGIIVGTVFIIK
GVRKSNAAERRGPL
>gi|512021338|ref|XP_004827896.1| PREDICTED: HLA class II histocompatibility antigen, DR alpha chain-like isoform X1 [Mustela putorius furo]
MDILHLSLVFQLILALHHSSPPYGHPLLLPPPTCLSHILGSSSSPFLVFILTLLLAFSEDHVIIQAEFYLTPDQSGEFMF
DFDGDEIFHVDMEKKETVWRLEEFGRFASFEAQGALANIAVDKANLDIMIKLSNHTPNTNVPPEVTVLSNTPVELGEPNT
LICFIDKFSPPVINVTWLRNGNPVTTGVSVSVFLPREDHLFRKFHYLPFLPSANDVYDCKVEHWGLEEPLLKHWEFEPPT
PLPETTENVVCALGLVVGLVGIIVGTIFIIKGMRKANAGERRGPL
>gi|165973426|ref|NP_001107178.1| MHC class II DR-alpha precursor [Sus scrofa] >gi|164552|gb|AAA31075.1| MHC class II DR-alpha [Sus scrofa] >gi|29124718|gb|AAO63765.1| MHC class II antigen [Sus scrofa] >gi|30909251|gb|AAP37550.1| MHC class II antigen [Sus scrofa] >gi|30909269|gb|AAP37559.1| MHC class II antigen [Sus scrofa] >gi|30909273|gb|AAP37561.1| MHC class II antigen [Sus scrofa] >gi|113197143|gb|ABI31830.1| MHC class II antigen [Sus scrofa] >gi|118490467|gb|ABK96887.1| MHC class II antigen DR-alpha [Sus scrofa] >gi|189514166|gb|ACE07020.1| MHC class II antigen [Sus scrofa] >gi|284192648|gb|ADB82916.1| MHC class II antigen [Sus scrofa]
MTILGVPVLGFVITILNLQKSWAIVENHVIIQAEFYLSPDKSGEFMFDFDGDEIFHVDMEKRETVWRLEEFGHFASFEAQ
GALANIAVDKANLEILIKRSNNTPNTNVPPEVTVLSDKPVELGEPNILICFIDKFSPPVVNVTWLRNGSPVTRGVSETVF
LPREDHLFRKFHYLPFMPSTEDVYDCQVEHWGLDKPLLKHWEFEAQTPLPETTENTVCALGLIVALVGIIVGTVLIIKGV
RKGNATERRGPL
>gi|528764643|gb|EPY84302.1| HLA class II histocompatibility antigen, DQ alpha 1 chain-like isoform 2 [Camelus ferus]
MILNRALILGVLTLTTVMSPCGAQDIVADHVASYGINVYQSYGPSGQYTHEFDGDEEFYVDLEKKETVWQLPLFSKFRNF
DPQGALRNLDISKHNLDIIIKRSNSTAATNEVPEVTVFPKAPVMLGQPNTLICHVDNIFPPVINITWLRNGRSVTEGVSE
TSFLSKNDHSFLKISYLTFLPSDDDIYDCKVEHWGLDEPLLKHWEPEIPTPMSELTETVVCTLGLTVGLVGIVVGTVFII
QGLRSGALSLCEREERMC
>gi|21586021|gb|AAM55502.1| MHC class II antigen [Sus scrofa]
MVPGRVLMWGALALTAVMSACGGEDIAADHVASYGLNVYQSYGPSGYYTHEFDGDEEFYVDLEKKETVWQLPLFRKFRSF
DPQGALRNIAVGKLTLNILTKRSNNTAAVNKVPEVTVFSKSPVILGQPNTLICHVDSIFPPVINITWLKNGHSVTEGFSE
TSFLSRNDHSFLKISYLTFLPSDDDFYDCKVEHWGLDKPLLKHWEPEIPAPMSELTETVVCALGLIVGLVGIVVGTVLLI
RGLRSGGLSRHQGSL
>gi|525507216|ref|NP_001267646.1| mamu class II histocompatibility antigen, DR alpha chain-like precursor [Ovis aries] >gi|220981786|emb|CAX17685.1| MHC class II antigen [Ovis aries] >gi|347547357|gb|AEP03656.1| MHC class II antigen [Ovis aries] >gi|371444178|gb|AEX28227.1| MHC class II antigen, partial [Ovis canadensis] >gi|371444184|gb|AEX28230.1| MHC class II antigen, partial [Ovis canadensis] >gi|371444186|gb|AEX28231.1| MHC class II antigen, partial [Ovis canadensis]
MAITRVPILGLFITVLISLQESWAIKEDHVIIQAEFYLNPEESAEFMFDFDGDEIFHVDMQKKETVWRLPEFGRFASFEA
QGALANMAVMKANLDIMIKRSNNTPNTNVPPEVTLLPNKPVELGEPNTLICFTDKFSPPVISVTWLRNGIPVTDGVSQTV
FLPRDDHLFRKFHYLPFLPTTEDVYDCKVEHWGLNEPLLKHWEYEAPAPLPETTENAVCALGLIVALVGIIAGTIFIIKG
VRKANTVEGRGPL
>gi|470640398|ref|XP_004325185.1| PREDICTED: mamu class II histocompatibility antigen, DR alpha chain-like [Tursiops truncatus]
MAIIGVPIPGFFFIVLISLQESWAITEDHVIIQAEFSLSPYQSNEFMFDFDGDEIFHVDMEKKETVWRLKEFGNFASFQA
QGALANMAVGRANLDILIKRSNHTPNTNVPPEVTVLSNTPVELGEPNVLICFINKFSPPVINVTWLQNGKPVTTGVSETV
FLPRNDHLFRKFHYLPFVPSAEDVYDCKVEHWGLEEPLLKHWEYEAPTPLTETTENAVCALGLVMALVGIIVGTIFIIKG
VRKGNTVEHRGPL
>gi|301785760|ref|XP_002928294.1| PREDICTED: SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like [Ailuropoda melanoleuca]
MTLNRVLILGTLALTTMMSPSGSEDIVADHVASDGINVYQSYGPSGQFTHEFDGDEEFYVDLEKKETVWRLPMFSTFASF
DPQGALRNLAIVKQNLNIMINRSNYTAATNEVPDVTVFPKSPVMLGQPNTLICLVDNIFPPVINVTWLKNRHSVTEGVSE
TSFLAKKDHSFLKISYLTFLPSADDIYDCKVEHWGLEEPLLKHWEPEIATPMSELTETVVCALGLAVGLVGIVVGTVFII
QGLRSGGTPGHQGPL
>gi|548932560|emb|CCW28346.1| MHC class II antigen [Macaca fascicularis]
MAVSGVPVLGFFIIAMLMSAQESWAIKEEHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFE
AQGALANIAVDKANLEIMTKRSNNTPITNVPPEVTVLTNSPVELGEPNVLICFIDKFSPPVVKVTWLKNGKPVTTGVSET
VFLPREDHLFRKFHYLPFLPSTEDIYDCKVEHWGLDAPLLKHWEFDAPSPLPETTENVVCALGLIVGLVGIIVGAVFIIK
GVRKSNAAERRGPL
>gi|218664516|ref|NP_001136286.1| MHC class II DQ-alpha precursor [Equus caballus] >gi|408717192|gb|AFU83042.1| MHC class II antigen [Equus caballus]
MILNRALILGTLTLITMMSTCGGEDIVADHLGSYGTNVYQSYGPSGQFTHEFDGDEEFYVDLEKKETVWWLPMFSKFTSF
DPQGALRNIATSKYNLDILIKLSNSTAATNEVPEVTVFPKSPVMLGQPNTLICLVDNIFPPVINVTWLKDGHSVTEGVSE
TSFLPKNDHSFFKMSYLTFLPSADDIYDCKVEHWGLDEPLLKHWEPEIPTPVSELTETVVCALGLAMGLVDIVVGSILIS
RGLRSGDASRHQGPL
>gi|562872052|ref|XP_006163966.1| PREDICTED: HLA class II histocompatibility antigen, DQ alpha 2 chain-like [Tupaia chinensis]
MRMILNKALVLGALTLTTLMMSSCGGEDIVADHVGSYGINVYQSHGPSGQYTHEFDGDEQFYVDLQKKETVLWLPEFSKI
GRFDPQGALRNIATLKYNLDIMIKRSNSTAAPNKIPEATVFSKSPVKLGQPNTLICFVDNIFPPVINITWLSNGRSVTEG
VSETRFLSKSDHSFSKIGYLTFLPSADDVYDCKVEHWGLDEPLLKHWEPEIPAPVSELTETTVCALGLSIGLVGIVVGTV
FIIQGLRSGSTSRQQGPL
>gi|30909271|gb|AAP37560.1| MHC class II antigen [Sus scrofa] >gi|32699972|gb|AAP50527.1| MHC class II antigen [Sus scrofa] >gi|33465813|gb|AAP37563.2| MHC class II antigen [Sus scrofa] >gi|66796209|dbj|BAD99122.1| MHC class II histocompatibility antigen SLA-DRA [Sus scrofa]
MTILGVPVLGFVITILNLQKSWAIVENHVIIQAEFYLSPDKSGEFMFDFDGDEIFHVDMEKRETVWRLEEFGHFASFEAQ
GALANIAVDKANLEILIKRSNNTPNTNVPPEVTVLSDKPVELGEPNILICFIDKFSPPVVNVTWLRNGSPVTRGVSETVF
LPREDHLFRKFHYLPFMPSTEDVYDCQVEHWGLDKPLLKHWEFEARTPLPETTENTVCALGLIVALVGIIVGTVLIIKGV
RKGNATERRGPL
>gi|573008323|emb|CDL68735.1| MHC class II DQA [Ovis aries]
MILNRALILGALALTAMMNPSGSEDIVADHIGTYGVNVYQTYGPSGYYTHEFDGDEEFYVDLEKRETVWRLPMFSEVGYF
DPQFALRNIATFKHNLELMIQRSNSTAATNKVPEVTVFSKSPMMLGQPNTLICHVDNIFPPVINITWLRNGHSVIEGVSA
TSFLSKDDYSFSKISYLTFLPSDDDVYDCKVEHWGLDKPLLKHWEPEIPAPMSELTENVVCALGLTVGLVGIVVGTVLII
RGLRSGGPSRHQGPL
>gi|602695017|ref|XP_007459568.1| PREDICTED: HLA class II histocompatibility antigen, DR alpha chain-like [Lipotes vexillifer]
MAIIGVPIPGFFITVLISLQESWAITEDHVIIQAEFSLSPDQSNEFMFDFDGDEIFHVDMEKKETVWRLKEFGNFASFQA
QGALANMAVGKANLDIMIKRSNHTPNTNVPPEVTVLSNTPVELGEPNILICFINKFSPPVINVTWLQNGKPVTTGVSETV
FLPRNDHLFRKFHYLPFVPSAEDVYDCKVEHWGLEEPLLKHWEYEAPTPLTETTENTVCALGLVVALVGIIVGTIFIIKG
VRKGNTVEHRGPL
>gi|218675539|gb|ACL00561.1| MHC class II antigen [Macaca fascicularis] >gi|218675541|gb|ACL00562.1| MHC class II antigen [Macaca fascicularis] >gi|218675545|gb|ACL00564.1| MHC class II antigen [Macaca fascicularis] >gi|218675549|gb|ACL00566.1| MHC class II antigen [Macaca fascicularis] >gi|218675551|gb|ACL00567.1| MHC class II antigen [Macaca fascicularis] >gi|291173117|gb|ADD82834.1| MHC class II antigen [Macaca nemestrina]
VLGFFIIAMLMSAQESWAIKEEHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALAN
IAVDKANLEIMTKRSNNTPITNVPPEVTVLTNSPVELGEPNVLICFIDKFSPPVVKVTWLKNGKPVTTGVSETVFLPRED
HLFRKFHYLPFLPSTEDIYDCKVEHWGLDAPLLKHWEFDAPSPLPETTENVVCALGLIVGLVGIIVGTVFIIKGVRKSNA
AERR
>gi|558199735|ref|XP_006105213.1| PREDICTED: SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like [Myotis lucifugus]
MTLNRALIWGALALTTVLSRCGGEDIVADHVGAYGIHVYQSYGPSGQYTHEFDGDEEFYVDLDKEETVWRLPMFSEVTNF
DPQAGLREVATARYNLDLLIRRSNSTAAINEVPEVTVFPKSPVELGQPNTLICAVDNIFPPVINISWLSNGYSVTQGVSE
TSFLSKRDHSFLKISYLTFLPSADDVYDCKVEHWGLDQPLLKHWEPEIPAPMSELTETVVCALGLAVGLVGIVTGTVFII
QGLRPGGASRHQGPL
>gi|54780908|gb|AAV40620.1| MHC class II antigen [Rattus norvegicus] >gi|54780914|gb|AAV40623.1| MHC class II antigen [Rattus norvegicus] >gi|542130294|gb|AGV39040.1| RT1-Ba [Rattus norvegicus]
MPLSRALILGVLALTTMLSPCGGQDDIEADHLGSYGITVYQYYESKGQYTFEFDGDEIFSVDLDKKENIWRIPEFGQLTS
FDPQGALQNIAIIKHNLEILMKRSNSTPAVNEVPEATVFSKSPVLLGQPNTLICFVDNIFPPVINITWLRNSKSVTEGVY
ETSFLINSDYSFHKLSYLAFIPSNDDIYDCKVEHWGLDEPVLRHWEPEVPAPMSELTETVVCALGLSVGLVGIVVGTILI
IKGLRSGGSSRHPGPL
>gi|397471464|ref|XP_003807312.1| PREDICTED: HLA class II histocompatibility antigen, DQ alpha 1 chain-like [Pan paniscus]
MILNKALMLGALALTTVMSPCGGEDIVADHVASYGVNLYQSYGPSGQFTHEFDGDEQFYVDLGRKETVWCLPVLRQFRFD
PQFALTNIAVLKHNLNSLIKRSNSTAATNEVPEVTVFSKSPVTLGQPNILICLVDNIFPPVLNVTWLSNGHSVTEGVSET
SFLSKSDHSFFKISYLTFLPSADEIYDCKVEHWGLDQPLLKHWEPEIPAPMSELTETVVCTLGLSVGLVGIVVGTVLIIR
GLRSVGASRHQGPL
>gi|42794348|gb|AAS45649.1| MHC class II antigen [Zalophus californianus]
FFIMALLMGPQESWAIKEDHVIIQAEFYLTPDPSGEFMFDFDGDEIFHVDMEKKETVWRLEEFGRFASFEAQGALANIAV
DKANLDIMIKRSNHTPNTNVPPEVTVLSNTPVELGEPNTLICFIDKFSPPVINVTWLRNGNPVTTGVSETVFLPREDHLF
RKFLPSADDVYDCKVEHWGLDKPLLKHWEFEAPTPLPETKENVVCALGLVVGLVGIIVGTIFIIKGMRKVNAGERRGPL
>gi|165868|gb|AAA16793.1| MHC Ovar-DR-alpha [Ovis aries]
MAITRVPILGLFITVLLSLQESWAIKEDHVIIQAEFYLNPEESAEFMFDFDGDEIFHVDMQKKETVWRLPEFGRFASFEA
QGALANMAVMKANLDIMIKRSNNTPNTNVPPEVTLLPNKPVQLGEPNTLICFTDKFSPPVISVTWLRNGIPVTDGVSQTV
FLPRDDHLFRKFHYLPFLPTTEDVYDCKVEHWGLNEPLLKHWEYEAPAPLPETTENAVCALGLIVALVGIIAGTIFIIKG
VRKANTVEGRGPL
>gi|218675531|gb|ACL00557.1| MHC class II antigen [Macaca fascicularis] >gi|218675533|gb|ACL00558.1| MHC class II antigen [Macaca fascicularis] >gi|218675535|gb|ACL00559.1| MHC class II antigen [Macaca fascicularis] >gi|218675537|gb|ACL00560.1| MHC class II antigen [Macaca fascicularis] >gi|218675547|gb|ACL00565.1| MHC class II antigen [Macaca fascicularis] >gi|218675557|gb|ACL00570.1| MHC class II antigen [Macaca fascicularis] >gi|218675559|gb|ACL00571.1| MHC class II antigen [Macaca fascicularis] >gi|218675561|gb|ACL00572.1| MHC class II antigen [Macaca fascicularis] >gi|218675563|gb|ACL00573.1| MHC class II antigen [Macaca fascicularis] >gi|218675571|gb|ACL00577.1| MHC class II antigen [Macaca sylvanus] >gi|218764501|gb|ACL10144.1| MHC class II antigen DR alpha chain [Macaca fascicularis] >gi|218764503|gb|ACL10145.1| MHC class II antigen DR alpha chain [Macaca fascicularis] >gi|218764505|gb|ACL10146.1| MHC class II antigen DR alpha chain [Macaca fascicularis]
VLGFFIIAVLMSAQESWAIKEEHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALAN
IAVDKANLEIMTKRSNNTPITNVPPEVTVLTNSPVELGEPNVLICFIDKFSPPVVKVTWLKNGKPVTTGVSETVFLPRED
HLFRKFHYLPFLPSTEDIYDCKVEHWGLDAPLLKHWEFDAPSPLPETTENVVCALGLIVGLVGIIVGTVFIIKGVRKSNA
AERR
>gi|218675567|gb|ACL00575.1| MHC class II antigen [Macaca fascicularis]
VLGFFITAVLMSAQESWAIKEDHVIIQAEFYLNPDQSGEYMFDFDGDELFHVDMAKKETVWRLEEFGRFASFEAQGALAN
IAVDKANLEIMTKRSNNTPITNVPPEVTVLTNSPVELGEPNVLICFIDKFSPPVVKVTWLKNGKPVTTGVSETVFLPRED
HLFRKFHYLPFLPSTEDIYDCKVEHWGLDAPLLKHWEFDAPSPLPETTENVVCALGLIVGLVGIIVGTVFIIKGVRKSNA
AERR
>gi|30909257|gb|AAP37553.1| MHC class II antigen [Sus scrofa] >gi|113197141|gb|ABI31829.1| MHC class II antigen [Sus scrofa] >gi|168208398|gb|ACA21784.1| MHC class II antigen [Sus scrofa] >gi|189514162|gb|ACE07018.1| MHC class II antigen [Sus scrofa]
MTILGVPVLGFVITILNLQKSWAIVENHVIIQAEFYLSPDKSGEFMFDFDGDEIFHVDMEKRETVWRLEEFGHFASFEAQ
GALANIAVDKANLEILIKRSNNTPNTNVPPEVTVLSDKPVELGEPNILICFIDKFSPPVVNVTWLRNGSPVTRGVSETVF
LPREDHLFRKFHYLPFMPSTEDVYDCQVEHWGLDKPLLKHWEFEAQTPLPETTENTVCALGLIVALVGIIVGTVLIIKGV
RKGNATEHRGPL
>gi|199448|gb|AAA39614.1| MHC H2-IA-alpha, partial [Mus musculus]
LGVLALTTMLSLCGGEDDIEADHVGTYGISVYQSPGDIGQYTFEFDGDELFYVDLDKKETVWMLPEFGQLASFDPQGGLQ
NIAVVKHNLGVLTKRSNSTPATNEAPQATVFPKSPVLLGQPNTLICFVDNIFPPVINITWLRNSKSVADGVYETSFFVNR
DYSFHKLSYLTFIPSDDDIYDCKVEHWGLEEPVLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTIFIIQGLRSGG
TSRHPGPL
>gi|358418372|ref|XP_003583919.1| PREDICTED: SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like [Bos taurus] >gi|359078649|ref|XP_003587740.1| PREDICTED: LOW QUALITY PROTEIN: SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like [Bos taurus] >gi|148877329|gb|AAI46040.1| BOLA-DQA1 protein [Bos taurus]
MILNRALIWGALALTTMMGPSGSEDIVADHIGAYGINVYHSYGPSGYYTHEFDGDEEFYVDLEKRETVWNLPLFSKFRRF
DPQGALRNIATAKHNLEVLIQRSNSTTATNKVPEVTVFSKSPMMLGQPNTLICHVDNIFPPVINITWLKNGQLVIEGISE
TSFLSKDDHSFSKISYLTFLPSDDDVYDCKVEHWGLDKPLLKHWEPDIPAPMSELTETVVCALGLTVGLVGIVVGTVLII
RGLRSGGPSRHQGPL
>gi|218675569|gb|ACL00576.1| MHC class II antigen [Macaca sylvanus]
VLGFFIIAVLMSAQESWAIKEEHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALAN
IAVDKANLEIMTKRSNNTPITNVPPEVTVLTNNPVELGEPNVLICFIDKFSPPVVKVTWLKNGKPVTTGVSETVFLPRED
HLFRKFHYLPFLPSTEDIYDCKVEHWGLDAPLLKHWEFDAPSPLPETTENVVCALGLIVGLVGIIVGTVFIIKGVRKSNA
AERR
>gi|29124714|gb|AAO63763.1| MHC class II antigen [Sus scrofa] >gi|29124716|gb|AAO63764.1| MHC class II antigen [Sus scrofa] >gi|29888117|gb|AAP03006.1| MHC class II antigen [Sus scrofa] >gi|30909265|gb|AAP37557.1| MHC class II antigen [Sus scrofa] >gi|30909275|gb|AAP37562.1| MHC class II antigen [Sus scrofa] >gi|32250688|gb|AAP74557.1| MHC class II antigen [Sus scrofa] >gi|56553298|gb|AAR22516.2| MHC class II antigen [Sus scrofa] >gi|66796207|dbj|BAD99121.1| MHC class II histocompatibility antigen SLA-DRA [Sus scrofa] >gi|113197145|gb|ABI31831.1| MHC class II antigen [Sus scrofa] >gi|147225192|emb|CAN13332.1| major histocompatibility complex, class II, DR alpha [Sus scrofa] >gi|168208396|gb|ACA21783.1| MHC class II antigen [Sus scrofa] >gi|190133787|gb|ACE62912.1| MHC class II antigen [Sus scrofa]
MTILGVPVLGFVITILNLQKSWAIVENHVIIQAEFYLSPDKSGEFMFDFDGDEIFHVDMEKRETVWRLEEFGHFASFEAQ
GALANIAVDKANLEIMIKRSNNTPNTNVPPEVTVLSDKPVELGEPNILICFIDKFSPPVVNVTWLRNGSPVTRGVSETVF
LPREDHLFRKFHYLPFMPSTEDVYDCQVEHWGLDKPLLKHWEFEAQTPLPETTENTVCALGLIVALVGIIVGTVLIIKGV
RKGNATERRGPL
>gi|393888935|gb|AFN26716.1| MHC class II antigen, partial [Sus scrofa]
MTILGVPVLGFVITILNLQKSWAIVENHVIIQAEFYLNPDKSGEFMFDFDGDEIFHVDMEKRETVWRLEEFGHFASFEAQ
GALANIAVDKANLEILIKRSNNTPNTNVPPEVTVLSDKPVELGEPNILICFIDKFSPPVVNVTWLRNGSPVTRGVSETVF
LPREDHLFRKFHYLPFMPSTEDVYDCQVEHWGLDKPLLKHWEFEAQTPLPETTENTVCALGLIVALVGIIVGTVLIIKGV
RKGNATERRGPL
>gi|393713322|gb|AFN20259.1| MHC class II antigen, partial [Sus scrofa]
MTILGVPVLGFVITILNLQKSWAIVENHVIIQAEFYLSPDKSGEFMFDFDGDEIFHVDMEKRETVWRLEEFGHFASFEAQ
GALANIAVDKANLEIMIKRSNNTPNTNVPPEVTVLSDKPVELGEPNILICFIDKFSPPVVNVTWLRNGSPVTRGVSETVF
LPREDHLFRKFHYLPFMPSTEDVYDCQVEHWGLDKPLLKHWEFEARTPLPETTENTVCALGLIVALVGIIVGTVLIIKGV
RKGNATERRGPL
>gi|371444194|gb|AEX28235.1| MHC class II antigen, partial [Ovis canadensis]
MAITRVPILGLFITVLISLQESWAIKEDHVIIQAEFYLNPEESAEFMFDFDGDEIFHVDMQKKETVWRLPEFGRFASFEA
QGALANMAVMKANLDIMIKRSNNTPNTNVPPEVTLLPNKPVEPGEPNTLICFIDKFSPPVISVTWLRNGIPVTDGVSQTV
FLPRDDHLFRKFHYLPFLPTTEDVYDCKVEHWGLNEPLLKHWEYEAPAPLPETTENAVCALGLIVALVGIIAGTIFIIKG
VRKANTVEGRGPL
>gi|21586026|gb|AAM55503.1| MHC class II antigen [Sus scrofa]
MVPGRVLMWGALALTAVMSACGGEDIAADHVASYGLNVYQSYGSSGYYTHEFDGDEQFYVDLEKKETVWKLPLFSKFTSF
DPQGALRNIAVGKLTLNILTKRSNNTAAVNKVPEVTVFSKSPVILGQPNTLICHVDSIFPPVINITWLKNGHSVTEGFSE
TSFLSRNDHSFLKISYLTFLPSDDDFYDCKVEHWGLDKPLLKHWEPEIPAPMSELTETVVCALGLIVGLVGIVVGTVLLI
RGLRSGGLSRHQGSL
>gi|408717188|gb|AFU83040.1| MHC class II antigen [Equus caballus]
MILNRALILGALTLTTMMSACGGEDIVADHIGSYGITIYELSGPSGQYNFEFDGDETFYVDLEKKETIWRLPEFSKFARF
DPQGALESIATIKHNLDIMIKCTNSTPATNEVPEVTVFSKSPVMLGQPNTLICLADNIFPPVINVTWLKNGHSVTEGIYE
TSFLIKNDYSFFKISYLTFLPSADDIYDCKVEHWGLDEPLLKHWEPEIPTPMSELTETVVCALGLAVGLVGIAVGTFLII
RALRSGGALRRQGCL
>gi|218675543|gb|ACL00563.1| MHC class II antigen [Macaca fascicularis]
VLGFFIIAVLMSAQESWAIKEEHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALAN
IAVDKANLEIMTKRSNNTPITNVPPEVTVLTNSPVELGEPNVLICFIDKFSPPVVKVTWLKNGKPVTTGVSETVFLPRED
HLFRKFHYLPFLPSTEDIYDCKVEHWGLDAPLLKHWEFDAPSPLPETTENVVCALGLIVGLVGIIVGTVFIIKGVRKSNA
AECR
>gi|573008331|emb|CDL68739.1| MHC class II DQA [Ovis aries]
MVLNRALILGALALITMMSPSGSEDIVADHIAAYGINVYHKYGPSGYYTHEFDGDEEFYVDLEKRETVWHLPMFSKFRRF
DPQGALRNIAAAKHNLEVLIQDSNSTAASNKVPEVTVFSKSPVMLGQPNTLICHVDNIFPPVINITWLRNGHSVIEGVSE
TSFLSKDDHSFSKISYLTFLPSDDDVYDCKVEHWGLEEPLLKHWEPEIPAPMSELTETVVCALGLTVGLVGIVVGTVLII
RGLRSGGPSRHQGPL
>gi|1708111|sp|P01910.2|HA2K_MOUSE RecName: Full=H-2 class II histocompatibility antigen, A-K alpha chain; Flags: Precursor [Mus musculus] >gi|53077|emb|CAA24215.1| unnamed protein product [Mus musculus] >gi|199494|gb|AAA39636.1| MHC H2-I-A-alpha chain [Mus musculus]
MPRSRALILGVLALTTMLSLCGGEDDIEADHVGSYGITVYQSPGDIGQYTFEFDGDELFYVDLDKKETVWMLPEFAQLRR
FEPQGGLQNIATGKHNLEILTKRSNSTPATNEAPQATVFPKSPVLLGQPNTLICFVDNIFPPVINITWLRNSKSVTDGVY
ETSFFVNRDYSFHKLSYLTFIPSDDDIYDCKVEHWGLEEPVLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTIFI
IQGLRSGGTSRHPGPL
>gi|558208829|ref|XP_006107206.1| PREDICTED: SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like [Myotis lucifugus]
MALNRALIWGALALTTVLSRCGGEDIVADHIAAYGVCFSQSYSPSGQYTHEFDGDEEFYVDLEKRETVWQLPMFSEVRGF
DPQSGLTTVATARYNLDLLIKSSNSTAAINEVPEVTVFPKAPVELGQPNTLICAVDNIFPPVINISWLSNGHSVTQGVSE
TSFLSKSDDSFLKISYLTFLPSADDVYDCKVEHWGLDQPLLKHWEPEIPAPMSELTETVVCALGLAVGLVGIVTGTVFII
QGLRPGGASRHQGPL
>gi|530429572|ref|XP_005275599.1| PREDICTED: HLA class II histocompatibility antigen, DQ alpha 1 chain isoform X1 [Homo sapiens] >gi|386923|gb|AAA59756.1| MHC HLA-DQ alpha precursor, partial [Homo sapiens] >gi|386925|gb|AAA59759.1| MHC class II HLA-DQ-alpha [Homo sapiens] >gi|52840189|gb|AAU87987.1| MHC class II antigen [Homo sapiens] >gi|187957376|gb|AAI57866.1| Similar to HLA class II histocompatibility antigen, DQ(1) alpha chain precursor (DC-4 alpha chain) [Homo sapiens] >gi|443287475|emb|CCQ26874.1| MHC class II antigen [Homo sapiens] >gi|607346691|gb|AHW47921.1| MHC class II antigen [Homo sapiens] >gi|607346709|gb|AHW47938.1| MHC class II antigen [Homo sapiens] >gi|607346727|gb|AHW47955.1| MHC class II antigen [Homo sapiens] >gi|607346745|gb|AHW47972.1| MHC class II antigen [Homo sapiens]
MILNKALMLGALALTTVMSPCGGEDIVADHVASYGVNLYQSYGPSGQYSHEFDGDEEFYVDLERKETVWQLPLFRRFRRF
DPQFALTNIAVLKHNLNIVIKRSNSTAATNEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSE
TSFLSKSDHSFFKISYLTFLPSADEIYDCKVEHWGLDEPLLKHWEPEIPTPMSELTETVVCALGLSVGLVGIVVGTVLII
RGLRSVGASRHQGPL
>gi|218675553|gb|ACL00568.1| MHC class II antigen [Macaca fascicularis]
VLGFFIIAVLMSAQESWAIKEEHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALAN
IAVDKANLEIMTKRSNNTPITNVPPEVTVLTNSPVELGEPNVLICFIDKFSPPVVKVTWLKNGKPVTTGVSETVFLPRED
HLFRKFHYLPFLPSTEDIYDCKVEHWGLDAPLLKHWEFDAPSPLPETTENVVCALGLIVGLVGIIIGTVFIIKGVRKSNA
AERR
>gi|218675565|gb|ACL00574.1| MHC class II antigen [Macaca fascicularis]
VLGFFIIAVLMSAQESWAIKEEHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALAN
IAVDKANLEIMTKRSNNTPITNVPPEVTVLTNSPVELGEPNVLICFIDKFSPPVVKVTWLKNGKPVTTGVSETVFLPRED
HLFRKFHYLPFLPSTEDIYDCKVEHWGLDVPLLKHWEFDAPSPLPETTENVVCALGLIVGLVGIIVGTVFIIKGVRKSNA
AERR
>gi|595763378|ref|NP_001277874.1| mamu class II histocompatibility antigen, DR alpha chain-like precursor [Bubalus bubalis] >gi|63253821|gb|AAY40169.1| MHC class II antigen [Bubalus bubalis]
MAITRVPILGLFITVLISLQESWAIKEDHVIIQAEFYLKPEESAEFMFDFDGDEIFHVDMTKKETVWRLPEFGHFASFEA
QGALANMAVMKANLDIMIKRSNNTPNTNVPPEVTLLPNKPVELGEPNTLICFIDKFSPPVISVTWLRNGKPVTDGVSQTV
FLPRNDHLFRKFHYLPFLPTTEDVYDCKVEHLGLNEPLLKHWEYEAPSPLPETTENAVCALGLIVALVGIIAGTVFIIKG
VRKANTAERRGPL
>gi|554547246|ref|XP_005868177.1| PREDICTED: SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like [Myotis brandtii] >gi|521027126|gb|EPQ08914.1| SLA class II histocompatibility antigen, DQ haplotype D alpha chain [Myotis brandtii]
MTLNRALIWGALALTTVLSRCGGEDIVADHVGAYGGSFSQSYGPSGQYTFEFDGNEIFHVDLKKEETVWRLPGLSEFGSY
DPQGGLRNMAVANQNLDFLIKLSNSTAAINEVPEVTVFPKAPVELSQPNTLICAVDNIFPPVINISWLSNGHSVTQGVSE
TSFLSKRDHSFLKISYLTFLPSVDDVYDCKVEHWGLDQPLLKHWEPEIPAPMSELTETVVCALGLAVGLVGIVTGTVFII
QGLRPGGASRNQGPL
>gi|562878756|ref|XP_006167087.1| PREDICTED: mamu class II histocompatibility antigen, DR alpha chain-like [Tupaia chinensis]
MVIRGVLVLELFIIGVLIPQESWAIKEEHVIIQAEFYLSPDQRGEFMFDFDGDEIFHVDMDKKETVWRLKEFGQFAGFEA
QGALANIAVDKANLEIMMKRSNNTPDTNVAPEVTVLTDKPVELGEPNILICFIDKFSPPVIDVTWLKNGKPVTMGRSETI
FLPREDHLFRKFHYLPFVPSTEDFYDCKVEHWGFDKPVLTHWEFEMQTPLPETTENVVCALGLVVGLVGIIVGTVLIIKG
VRKGNATERRGPL
>gi|310118015|ref|XP_003120317.1| PREDICTED: HLA class II histocompatibility antigen, DQ alpha 1 chain-like isoformX1 [Homo sapiens] >gi|530359710|ref|XP_005276137.1| PREDICTED: HLA class II histocompatibility antigen, DQ alpha 1 chain-like isoform X2 [Homo sapiens] >gi|530428319|ref|XP_005275010.1| PREDICTED: HLA class II histocompatibility antigen, DQ alpha 1 chain isoform X1 [Homo sapiens] >gi|530428646|ref|XP_005275165.1| PREDICTED: HLA class II histocompatibility antigen, DQ alpha 1 chain isoform X1 [Homo sapiens] >gi|32134|emb|CAA24917.1| unnamed protein product [Homo sapiens] >gi|47496541|emb|CAG29293.1| HLA-DQA1 [Homo sapiens] >gi|115529023|gb|AAI25046.1| HLA-DQA1 protein [Homo sapiens] >gi|649100546|gb|AIC48935.1| HLA-DQA1, partial [synthetic construct] >gi|223784|prf||0911277A antigen HLA DS alpha heavy chain
MILNKALMLGALALTTVMSPCGGEDIVADHVASYGVNLYQSYGPSGQFTHEFDGDEEFYVDLERKETVWKLPLFHRLRFD
PQFALTNIAVLKHNLNILIKRSNSTAATNEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSET
SFLSKSDHSFFKISYLTFLPSADEIYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVLIIR
GLRSVGASRHQGPL
>gi|224340|prf||1102204A antigen IA alpha
PGGLCSRALILGVLALTTMLSLCGGEDDIEADHVGSYGITVYQSPGDIGQYTFEFDGDELFYVDLDKKETVWMLPEFAQL
RRFEPQGGLQNIATGKHNLEILTKRSNSTPATNEAPQATVFPKSPVLLGQPNTLICFVDNIFPPVINITWLRNSKSVTDG
VYETSFFVNRDYSFHKLSYLTFIPSDDDIYDCKVEHWGLEEPVLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTI
FIIQGLRSGGTSRHPGPL
>gi|90819616|gb|ABD98453.1| MHC class II antigen precursor [Bubalus bubalis]
MVLNRALILGALALTTMMSPSGSEDIVADHIGAYGINVYHSYGPSGYYTHEFDGDEEFYVDLEKKETVWHLPLFSKFTSF
DPQGALRNIANAKYNLEIMIQESNSTAATNKVPEVTVFSKSPVMLDQPNTLICHVDNIFPPVISITWLRNGHSVIEGVSE
TSFLSKDDHSFSKISYLTFLPSDDDVYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLTVGLVGIVVGTVLII
RGLRSGGPSRHQGPL
>gi|254554240|gb|ACT67485.1| MHC class II antigen [Mastomys natalensis]
MPRSRALILGVLALTTMLRPCGGQDDIEADHIGNYGINVYQSYGSNGQFTFEFDGDGEFYVDLDKKETVWRLPEFGQLTS
FDPQGGLQNIATAKHNLDILIKRSNSTPATNEAPAATVFPKSPVLLGQPNTLICFVDNIFPPVISITWLRNSKPVTEGVY
ETSFLSNPDHSFHKMSYLTFVPSDYDIYDCKVEHWGLDEPVLKHWEPEIPAPMSELTETVVCALGLSVGLIGIVVGTIFL
IKGLRSGGTSRHPGPL
>gi|30909255|gb|AAP37552.1| MHC class II antigen [Sus scrofa]
MTILGVPVLGFVITILNLQKSWAIVENHVIIQAEFYLSPDKSGEFMFDFDGDEIFHVDMEKRETVWRLEEFGHFASFEAQ
GALANIAVDKANLEIMIKRSNNTPNTNVPPEVTVLSDKPVELGEPNILICFIDKFSPPVVNVTWLRNGSPVTRGVSETVF
LPREDHLFRKFHYLPFMPSTEDVYDCQVEHWGLDKPLLKHWEFEAQTPLPETTENTVCALGLIVALVGIIVGTVLIIKGV
RKGNATERRGP
>gi|402866584|ref|XP_003897459.1| PREDICTED: mamu class II histocompatibility antigen, DR alpha chain-like [Papio anubis]
MAASGVPVLGFFITAVLMSAQESWAIKEEHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFE
AQGALANIAVDKANLEIMTKRSNNTPITNVPPEVTVLTNSPVELGEPNVLICFIDKFSPPVVNVTWLQNGKPITTGVSET
VFLPREDHLFRKFHYLPFLPSTEDIYDCKVEHWGLDAPLLKHWEFDAQSPLPETTENVVCALGLIVGLVGIIVGTIFIIK
GVRKSNAAERRGPL
>gi|571026310|emb|CDK12861.1| MHC class II protein [Macaca nemestrina] >gi|671708689|gb|AII81861.1| MHC class II antigen [Macaca nemestrina]
MILNKALMLGALVLTTVMSPCGGEDIVADHVASYGVNVYQSYGLSGQYSHEFDGDEQFYVDLGRKETVWRLPILSQFSFD
PQFALRNIAVLTHNLNSLIKRSNSTAATNEVPEVTVFSKSPVTLGHPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSET
SFLSKSDHSFFKISYLTFLPSADEIYDCRVEHWGLDEPLLKHWEPEIPVPMSELTETVVCALGLSAGLVGIVVGTVLIIR
GLRSVGASRHQGPL
>gi|189514164|gb|ACE07019.1| MHC class II antigen [Sus scrofa]
MTILGVPVLGFVITILNLQKSWAIVENHVIIQAEFYLSPDKSGEFMFDFDGDEIFHVDMEKRETVWRLEEFGHFASFEAQ
GALANIAVDKANLEIMIKRSNNTPNTNVPPEVTVLSDKPVELGEPNILICFIDKFSPPVVNVTWLRNGSPVTRGVSETVF
LPREDHLFRKFHYLPFMPSTEDVYDCQVEHWGLDKPLLKHWEFEAQTPLPETTENTVCALGLIVPLVGIIVGTVLIIKGV
RKGNATERRGPL
>gi|466085919|ref|XP_004285671.1| PREDICTED: mamu class II histocompatibility antigen, DR alpha chain-like [Orcinus orca]
MAIIGVPIPGFFITVLISLQESWAITEDHVIIQAEFSLSPYQSNEFMFDFDGDEIFHVDMEKKETVWRLKEFGNFASFQA
QGALANMAVGRANLDILIKLSNHTPNTNVPPEVTVLSNTPVELGEPNVLICFINKFSPPVINVTWLQNGKPVTTGVSETV
FLPRNDHLFRKFHYLPFVPSAEDVYDCKVEHWGLEEPLLKHWEYEAPTPLTETTENAVCALGLVMALVGIIVGTIFIIKG
VRKGNTVEHRGPL
>gi|283857933|gb|ADB45847.1| MHC class II antigen [Sus scrofa]
MTILGVPVLGFVITILNLQKSWAIVENHVIIQAEFHLSPDKSGEFMFDFDGDEIFHVDMEKRETVWRLEEFGHFASFEAQ
GALANIAVDKANLEIMIKRSNNTPNTNVPPEVTVLSDKPVELGEPNILICFIDKFSPPVVNVTWLRNGSPVTRGVSETVF
LPREDHLFRKFHYLPFMPSTEDVYDCQVEHWGLDKPLLKHWEFEAQTPLPETTENTVCALGLIVALVGIIVGTVLIIKGV
RKGNATERRGPL
>gi|586544734|ref|XP_006907483.1| PREDICTED: HLA class II histocompatibility antigen, DQ alpha 2 chain-like [Pteropus alecto] >gi|431916894|gb|ELK16654.1| HLA class II histocompatibility antigen, DQ(1) alpha chain [Pteropus alecto]
MILNRALILGALTLITLMSPCGSEDIVADHVASYGINVYQSYGPSGQYTHEFDGDEEFYVNLEKQETVWRLPEFGEFTSF
DPQGALRNIAIGKHNLDIMIKRSNSTAAPIKIPEVTVFPKSPVMLSHPNILICLVDNIFPPVINITWLNNGHSVTEGVSE
TSFLSKNDHSFFKISYLTFLPSADNIYDCKVEHWGLDKPLLKHWEPEIPTPVSELTETVICALGLTMGLVGIVMGTVFIV
QGLRSGGTSRSQGPL
>gi|83596445|gb|ABC25562.1| MHC class II antigen [Sus scrofa]
MTILGVPVLGFVITILNLQKSWAIVENHVIIQAEFYLSPDKSGEFMFDFDGDEIFHVDMEKRETVWRLEEFGHFASFEAQ
GALANIAVDKANLEILIKRSNNTPNTNVPPEVTVLSDKPVELGEPNILTCFIDKFSPPVVNVTWLRNGSPVTRGVSETVF
LPREDHLFRKFHYLPFMPSTEDVYDCQVEHWGLDKPLLKHWEFEAQTPLPETTENTVCALGLIVALVGIIVGTVLIIKGV
RKGNATERRGPL
>gi|371444180|gb|AEX28228.1| MHC class II antigen, partial [Ovis canadensis]
MAITRVPILGLFITVLISLQESWAIKEDHVIIQAEFYLNPEESAEFMFDFDGDEIFHVDMQKKETVWRLPEFGRFASFEA
QGALANMAVMKANLDIMIKRSNNTPNTNVPPEVTLLPNKPVELGEPNTLICFTDKFSPPVISVTWLRNGIPVTDGVSQTV
FLPRDDHLFRKFHYLPFLPTTEDVYDCKVEHWGLNEPLLKHWEYEAPAPLPETTENAGCALGLIVALVGIIAGTIFIIKG
VRKANTVEGRGPL
>gi|356707399|gb|AET36875.1| MHC class II antigen DR alpha chain, partial [Meles meles]
ISGVPVLGFFIMTLLMGPQESQAIKEDHVIIQAEFYLTPDPSGEFMFDFDGDEIFHVDMEKKETVWRLEEFGRFASFEAQ
GALANIAVDKANLDIMIKRSNHTPNTNVPPEVTVLSNTPVELGEPNTLICFIDKFSPPVINVTWLRNGNPVTTGVSETVF
LPREDHLFRKFHYLPFLPSANDVYDCKVEHWGLDEPLLKHWEFEPPTPLPETTENVVCALGLVVGLVGII
>gi|634877390|ref|XP_007949492.1| PREDICTED: HLA class II histocompatibility antigen, DQ alpha 2 chain-like isoform X2 [Orycteropus afer afer]
MILNEALILGVLALTTMMSTCETDHVASYGTTVYQSYGPNGQYTHDFDGDEQFYVDLDKKQTVWQLPLFSKLLSFDPQGG
LRNIAVGKYNLDLLTKYYNFTAATNEVPEVTVFPKSFVELGHPNVLICLVDNIFPPVINITWLSNGHSVTEGVTETNFLP
KSDHSFHKISYLTFLPSADDIYDCKVEHWGLDEPLLKHWEPEIPTPMSELTETVVCALGLAVGLVGIVVGTILIIRGLRS
GGASRHQGPL
>gi|34395494|sp|Q30631.1|DRA_MACMU RecName: Full=Mamu class II histocompatibility antigen, DR alpha chain; AltName: Full=MHC class II antigen DRA; Flags: Precursor >gi|561733|gb|AAB63305.1| MHC class II DRA [Macaca mulatta]
MAESGVPVLGFFIIAVLMSAQESWAIKEEHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFE
AQGALANIAVDKANLEIMTKRSNNTPITNVPPEVTVLTNSPVELGEPNVLICFIDKFSPPVVKVTWLKNGKPVTTGVSET
VFLPREDHLFRKFHYLPFLPSTEDIYDCKVEHWCLDAPLLKHWEFDAPSPLPETTENVVCALGLIVGLVGIIVGTVFIIK
GVRKSNAAERRGPL
>gi|471419302|ref|XP_004391142.1| PREDICTED: mamu class II histocompatibility antigen, DR alpha chain-like [Trichechus manatus latirostris]
MAQSGVPGLGCFIMAVLMSFHQTWAIKEEHVIIQAEFYQTPDQSGEFMFDFDGDEIFHVDMEKKETVWRLEEFGRFASFE
AQGALANIAVDKANLDIMMKRSNYTPNNNESPEVTVLLNSPAEVGQPNILICFVDKFSPPVLNVTWLKNGKPVTTGVSET
VFLPREDHLFRKFYYLPFLPSVDEFYDCQVDHWGLDKPVLKHWELEVPAPLPETTENLVCILGLLVGLVGIVVGTIFIIK
GVRKGNAVERRGPL
>gi|223913|prf||1004300B antigen alpha,II histocompatibility
MILNKALMLGALALTTVMSPCGGEDIVADHVASYGVNLYQSYGPSGQYSHEFDGDEEFYVDLERKETVWQLPLFRRFRRF
DPQFALTNIAVLKHNLNIVIKRSNSTAATNEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSE
TSFLSKSDHSFFKISYLTFLPSADEIYDCKVEHWGLDEPLLKHWEPEIPTPMSELTETLVCALGLSVGLVGIVVGTVLII
RGLRSVGASRHQGPL
>gi|594046258|ref|XP_006047584.1| PREDICTED: SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like [Bubalus bubalis]
MVLNRALILGTLALTTMMSPSGGEDIVADHVGIYGVNIYQSYGPSGQFTHEFDGDEQFYVDLEKKETVWKLPLFSRMLSF
DPQFALRNIAIMKGHVDFLTKFSNSTAATNKVPEVTVFSKSPVMLGQPNTLICHVDNIFPPVINITWLRNGHSVTEGVSE
TSFLIKSDYSFLKIKYLTFLPSDDDIYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETVVCTLGLTVGLVGITVGTIFII
QGLRSGDPSRHQGPL
>gi|218675555|gb|ACL00569.1| MHC class II antigen [Macaca fascicularis]
VLGFFIIAVLMSAQESWAIKEEHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALAN
IAVDKANLEIMTKRSNNTPITNVPPEVTVLTNSPVELGEPNVLICFIDKFSPPVVKVTWLKNGKPVTTGVSETVFLPRED
HLFRKFHYLPFLPSTEDIYDCKVEHWGLDVPLLKHWEFDAPSPLPETTENVVCALGLIVGLAGIIVGTVFIIKGVRKSNA
AERR
>gi|554537320|ref|XP_005863350.1| PREDICTED: SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like [Myotis brandtii]
MALNRALIWGALALTTVLSRCGGEDIVADHVAAYGVCFSQSYSPSGQYTQEFDGDEEFYVDLEKRETVWQQPMFSEVRGF
DPQSGLREVNTARYNLDLLIKRSNSTAAINEVPEVTVFPKSPVELGQPNTLICAVDNIFPPVINISWLSNGHSVTQGVSE
TSFLPKRDHSFLKISYLTFLPSADDVYDCKVEHWGLDQPLLKHWEPEIPAPMSELTETVVCALGLAVGLVGIVMGTVFII
QGLRPAGASRHQGPL
>gi|402692326|ref|NP_001012693.2| major histocompatibility complex, class II, DQ alpha 5 precursor [Bos taurus] >gi|296474350|tpg|DAA16465.1| TPA: major histocompatibility complex, class II, DQ alpha 5 [Bos taurus]
MVLNRALILGTLALTTMMSPSGGEDIVADHVGIYGVNIYQSYGPSGQFTHEFDGDEQFYVDLEKKETVWKLPLFSRMLSF
DPQFALRNIAIMKLHVDFLTKFSNSTAATNKVPEVTVFSKSPVMLGQPNTLICHVDNIFPPVINITWLRNGHSVTEGVSE
TSFLIKSDYSFLKIKYLTFLPSDDDIYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETVVCTLGLTVGLVGIMVGTIFII
QGLRSGDPSRHQGPL
>gi|76446360|gb|ABA42966.1| MHC class II antigen alpha chain [Sus scrofa]
MVPGRVLMWGALALTAVMSACGGEDIAADHVASYGLNVYQSYGSSGYYTHEFDGDEEFYVDLEKKETVWQLPLFSKFTSF
DPQGALRNIAVGKLTLNILTKRSNNTAAVNKVPEVTVFSKSPVILGQPNTLICHVDSIFPPVINITWLKNGHSVTEGFSE
TSFLSKNDHSFLKISYLTFLPSDDDFYDCKVEHWGLDKPLLKHWEPEIPAPMSELTETVVCALGLIVGLVGIVVGTVFII
QGLRSGGPSRHQGSL
>gi|440891517|gb|ELR45153.1| Mamu class II histocompatibility antigen, DR alpha chain, partial [Bos mutus]
PKKKMAITRVPILGLFITVLIGLQESWAIKENHVIIQAEFYLKPEESAEFMFDFDGDEIFHVDMGKKETVWRLPEFGHFA
SFEAQGALANMAVMKANLDIMIKRSNNTPNTNVPPEVTLLPNKPVELGEPNTLICFIDKFSPPVISVTWLRNGKPVTDGV
SQTVFLPRNDHLFRKFHYLPFLPTTEDVYDCKVEHLGLNEPLLKHWEYEAPAPLPETTENAVCALGLIVALVGIIAGTIF
IIKGVRKANTVERRGPL
>gi|558196418|ref|XP_006104489.1| PREDICTED: SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like [Myotis lucifugus]
MALNRALIWGALALITVLSRCGGEDIVADHVGNFGPCFSQSYGSSGQYTFEFDGEEIFYVDQNKRETVWRLPGLSEFGGF
DPQGGLRNIATMNHNLDIMIKHSNYTAAINEVPEVTVFPKSPVELGQPNTLICAVDNIFPPVINISWLSNGHSVTQGVSE
TSFLSKSDDSFLKISYLTFLPSADDVYDCKVEHWGLDQPLLKHWEPEIPAPMSELTETVVCALGLAVGLVGIVTGTVFII
QGLRPAGASRHQGPL
>gi|507924286|ref|XP_004673410.1| PREDICTED: SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like [Condylura cristata]
MITYRALILGALTLGTVMSLCVGEEIEADHVASYGTNVYQTYGSTGQYTHEFDGDEEFFVDLEKKETVWQLPMFSQFRRF
DPQGALRNIATAKYNLDIMIKRSNSTAAANKVPGVTVFPKSPVTLTQPNTLICLVDNIFPPVINITWLVNGHSVTEGVSE
TSFLPRSDHAFFKTSYLTFLPSDNDVYDCKVEHWGLEEPLLKHWEPEIPAPMSELTENVVCALGLTVGLVGIVVGTTFII
QGLRSGDTSRHQGPL
>gi|408717190|gb|AFU83041.1| MHC class II antigen [Equus caballus]
MILNRALILGALTLTTMMSACGGEDIVADRIGSYGITIYELSGPSGQYNFEFDGDETFYVDLEKKETIWRLPEFSKFARF
DPQGALESIATIKHNLDIMIKCTNSTPATNEVPEVTVFSKSPVMLGQPNTLICLADNIFPPVINVTWLKNGHSVTEGIYE
TSFLIKNDYSFFKISYLTFLPSADDIYDCKVEHWGLDEPLLKHWEPEIPTPMSELTETVVCALGLAVGLVGIAVGTFLII
RALRSGGALRRQGCL
>gi|84796233|gb|ABC66206.1| MHC class II antigen [Homo sapiens]
MILNKALMLGALALTTVMSLCGGEDIVADHVASYGVNLYQSYGPSGQYSHEFDGDEEFYVDLERKETVWQLPLFRRFRRF
DPQFALTNIAVLKHNLNIVIKRSNSTAATNEVPEVTVFSKSPVTLGQPNTLICLVGNIFPPVVNITWLSNGHSVTEGVSE
TSFLSKSDHSFFKISYLTFLPSDDEIYDCKVEHWGLDEPLLKHWEPEIPTPMSELTETVVCALGLSVGLVGIVVGTVLII
RGLRSVGASRHQGPL
>gi|58801551|ref|NP_001011723.1| MHC class II DR alpha chain precursor [Canis lupus familiaris] >gi|545518294|ref|XP_005627123.1| PREDICTED: MHC class II DR alpha chain isoform X1 [Canis lupus familiaris] >gi|545518296|ref|XP_005627124.1| PREDICTED: MHC class II DR alpha chain isoform X2 [Canis lupus familiaris] >gi|565245|gb|AAA99463.1| MHC class II DR alpha chain [Canis lupus familiaris] >gi|54648999|emb|CAH61722.1| MHC class II antigen DR alpha [Canis lupus familiaris]
MTISGVPVLGFFIMAFLMGPQESWAVKEEHVIIQAEFYLTPDPSGEFMFDFDGDEIFHVDMEKKETVWRLEEFGRFASFE
AQGALANIAVDKANLDTMIKRSNHTPNTNVPPEVTVLSNTPVELGEPNILICFIDKFSPPVINVTWLRNGNPVTTGVSET
IFLPREDHLFRKFHYLPFLPSAEDVYDCKVEHWGLDEPLLKHWEFEPPTPLPETTENVVCALGLIVGLVGIITGTIFIIK
GMRKVKAGERRGPL
>gi|40950152|gb|AAR97716.1| major histocompatibility class II DQA1 [Capra hircus]
MILNRALILGALALTTVMSPSGSEDIVADHIAAYGINVYHSYGPSGHYTHEFDGDEEFYVDLEKKETVWRLPEFSKFVGF
DPQGALRNMASGKQTLEIMIQSSNSTAATNKVPEVTVFSKSPVMLGQPNTLICHVDNIFPPVINITWLRNGHSVIEGTSE
TSFLSKDDHSFSKISYLTFLPSDDDIYDCKVEHWGLEEPLLKHWEPEIPAPMSELTETVVCALGLTVGLVGIVVGTILII
RGLRSGGPSRHQGPL
>gi|655348396|gb|AIC84020.1| MHC class II antigen A alpha [Mus musculus]
MPRSRALILGVLALTTMLSLCGGEDDIEADHVGSYGISVYQSPGDIGQYTHEFDGDEWFYVDLDKKETVWMLPEFGQLTS
FDPQGGLKNIATGKHNLGILTKRSNFTPATNEAPQATVFPKSPVLLGQPNTLICFVDNIFPPVINITWLRNSKSVTDGVY
ETSFLVNRDHSFHKLSYLTFIPSDDDIYDCKVEHWGLEEPVLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTIFI
IQGLRSGGTSRHPGPL
>gi|76446348|gb|ABA42960.1| MHC class II antigen alpha chain [Sus scrofa]
MVPGRVLMWGALALTTVMSACGGEDIAADHVASYGLNVYQSYGPSGYFTHEFDGDEEFYVDLEKKETVWRLPLFSEFTSF
DPQGALRNIATLKHNLNIVTKRSNNTAAVNKVPEVTVFSKSPVILGQPNTLICHVDSIFPPVINITWLKNGHSVKGFSET
SFLSKNDHSFLKISYLTFLPSDDDFYDCKVEHWGLDKPLLKHWEPEIPAPMSELTETVVCALGLIVGLVGIVVGTVFIIQ
GLRSGGPSRHQGSL
>gi|66796191|dbj|BAD99113.1| MHC class II histocompatibility antigen SLA-DQA [Sus scrofa] >gi|113197133|gb|ABI31825.1| MHC class II antigen [Sus scrofa] >gi|147225190|emb|CAN13327.1| major histocompatibility complex, class II, DQ alpha 1 [Sus scrofa]
MVPGRVLMWGALALTTVMSACGGEDIAADHVASYGLNVYQSYGPSGYFTHEFDGDEEFYVDLEKKETVWRLPLFSEFTSF
DPQGALRNIATLKHNLNIVTKRSNNTAAVNQVPEVTVFSKSPVILGQPNTLICHVDSIFPPVINITWLKNGHSVKGFSET
SFLSKNDHSFLKISYLTFLPSDDDFYDCKVEHWGLDKPLLKHWEPEIPAPMSELTETVVCALGLIVGLVGIVVGTVFIIQ
GLRSGGPSRHQGSL
>gi|27372093|gb|AAN87894.1| major histocompatibility 2 class II antigen A alpha [Sigmodon hispidus]
MMPSRTLIWGILALATTLSPCGGEDDIKADHVGIYGMTMYQSHKPNGQYIFEFDGDELFYVDSDKKETVWRIPEFGELTS
FDPQGGLQDIATVKHNLEILTKRSNSTPATNKVPEVTVLPKSPVLLGQPNTLICFVDNIFPPVINITWLKNSKSITDGVY
ETSFLSNSDHSFHKMVYLTFIPSDDDVYDCKVEHWGLDEPVLKHWELDVTAPMSELPETVVCALGLSVGIVGIVVGTIFI
IQGLRSGGTSRHPGPL
>gi|378532203|gb|AFC17492.1| MHC class II antigen [Sus scrofa]
MVPGRVLMWGALALTAVMSACGGEDIAADHVASYGLNVYQSYGPSGYFTHEFDGDEEFYVDLEKKETVWRLPLFSEFTSF
DPQGALRNIATLKHNLNIVTKRSNNTAAVNQVPEVTVFSKSPVILGQPNTLICHVDSIFPPVINITWLKNGHSVKGFSET
SFLSKNDHSFLKISYLTFLPSDDDFYDCKVEHWGLDKPLLKHWEPEIPAPMSELTETVVCALGLIVGLVGIVVGTVFIIQ
GLRSGGPSRHQGSL
>gi|400153877|ref|NP_001257840.1| HLA class II histocompatibility antigen, DR alpha chain precursor [Callithrix jacchus]
MAVSGVLVLGFFLMIVLMSPQESWAIKEEHVIIQAEFYLNPEQSGEFMFDFDGDEIFHVDMTKKETVWRLEEFGKFASFE
AQGALANIAVDKANLEIMTKRSNNTPISNVPPEVTVLTDSPVELGEPNVLICFIDKFTPPVVNVTWLQNGKPVTTGVSET
VFLPREDHLFRKFHYLPFLPSTEDIYDCKVEHLGLDEPLLKHWEYDAPSPLPETTENVVCALGLIVGLVGIIVGTIFIIK
GVRKSNATERRGPL
>gi|393713324|gb|AFN20260.1| MHC class II antigen, partial [Sus scrofa]
MTILGVPVLGFVITILNLQKSWAIVENHVIIQAEFYLSPDKSGEFMFDFDGDEIFHVDMEKRETVWRLEESGHFASFEAQ
GALANIAVDKANLEIMIKRSNNTPNTNVPPEVTVLSDKPVELGEPNILICFIDKFSPPVVNVTWLRNGSPVTRGVSETVF
LPREDHLFRKFHYLPFMPSTEDVYDCQVEHWGLDKPLLKHWEFEAQTPLPETTENTVCALGLIVALVGIIVGTVLIIKGV
RKGNATERRGPL
>gi|397140048|ref|XP_003846516.1| PREDICTED: HLA class II histocompatibility antigen, DQ alpha 1 chain isoformX2 [Homo sapiens] >gi|52840169|gb|AAU87972.1| MHC class II antigen [Homo sapiens] >gi|348080832|gb|AEP60146.1| MHC class II antigen [Homo sapiens]
MILNKALMLGALALTTVMSPCGGEDIVADHVASYGVNLYQSYGPSGQYSHEFDGDEEFYVDLERKETVWQLPLFRRFRRF
DPQFALTNIAVLKHNLNIVIKRSNSTAATNEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSE
TSFLSKSDHSFFKISYLTFLPSDDEIYDCKVEHWGLDEPLLKHWEPEIPTPMSELTETVVCALGLSVGLVGIVVGTVLII
RGLRSVGASRHQGPL
>gi|571026312|emb|CDK12862.1| MHC class II protein [Macaca nemestrina] >gi|671708679|gb|AII81856.1| MHC class II antigen [Macaca nemestrina] >gi|671708683|gb|AII81858.1| MHC class II antigen [Macaca nemestrina]
MILNKALMLGALVLTTVMSPCGGEDIVADHVASYGVNVYQSYGLSGQYSHEFDGDEQFYVDLGRKETVWRLPILSQFSFD
PQFALRNIAVLTHNLNSLIKRSNSTAATNEVPEVTVFSKSPVTLGHPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSET
SFLSKSDHSFFKISYLTFLPSADEIYDCRVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSAGLVGIVVGTVLIIR
GLRSVGASRHQGPL
>gi|119570889|gb|EAW50504.1| major histocompatibility complex, class II, DQ alpha 1, isoform CRA_a [Homo sapiens]
MILNKALMLGALALTTVMSPCGGEDIVADHVASYGVNLYQSYGPSGQYSHEFDGDEEFYVDLERKETVWQLPLFRRFRRF
DPQFALTNIAVLKHNLNIVIKRSNSTAATNEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSE
TSFLSKSDHSFFKISYLTFLPSDDEIYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVLII
RGLRSVGASRHQGPL
>gi|283857939|gb|ADB45850.1| MHC class II antigen [Sus scrofa]
MVPGRVLMWGALALTTVMSACGGEDIAADHVASYGLNVYQSYGPSGYYTHEFDGDEEFYVDLEKKETVWRLPLFSEFTSF
DPQGALRNIATLKHNLNIVTKRSNNTPAVNQVPEVTVFSKSPVILGQPNTLICHVDSIFPPVINVTWLKNGHSVKGFSET
SFLSKNDHSFLKISYLTFLPSDDDFYDCKVEHWGLDKPLLKHWEPEIPAPMSELTETVVCALGLIVGLVGIVVGTVFIIQ
GLRSGSPSRHQGSL
>gi|190610004|ref|NP_001122065.1| MHC class II DQ-alpha chain precursor [Equus caballus] >gi|530127|gb|AAA66941.1| MHC class II HLA-DQ-alpha [Equus caballus]
MILNRALILGALTLTTMMSACGGEDIVADHFASYGINVYQSYGDFGQYTHEFDGDEEFHVDLEKKETIVRLPVFSEFTSF
DPQGALQNIATAKHNLDILIKRSNSTAATNEVPEVTVFPKSPVVLGQPNTLICLVDNIFPPVINVTWLRNGHSVSEGVFE
MIFLPKTDDSFLKISYLTFLPSADDIYDCKVEHWGLDEPLLKHWEPEIPTPMSELTETVVCALGLAVGFVGIVVGTFLII
RALRSGGALRRQGCL
>gi|122196|sp|P15980.1|HA2C_PIG RecName: Full=SLA class II histocompatibility antigen, DQ haplotype C alpha chain; Flags: Precursor >gi|164563|gb|AAA31082.1| MHC SLA-DQ alpha chain precursor [Sus scrofa] >gi|62114555|gb|AAX63483.1| MHC class II antigen [Sus scrofa] >gi|189514152|gb|ACE07013.1| MHC class II antigen [Sus scrofa]
MVPGRVLMWGALALTTVMSACGGEDIAADHVASYGLNVYQSYGPRGYFTHEFDGDEQFYVDLEKKETVWRLPLFSEFTSF
DPQGALRNIATLKHNLNIVTKRSNNTAAVNKVPEVTVFSKSPVILGQPNTLICHVDSIFPPVINITWLKNGHSVKGFSET
SFLSKNDHSFLKISYLTFLPSDDDFYDCKVEHWGLDKPLLKHWEPEIPAPMSELTETVVCALGLIVGLVGIVVGTVFIIQ
GLRSGGPSRHQGSL
>gi|408717176|gb|AFU83034.1| MHC class II antigen [Equus caballus]
MILNRALILGALTLTTMMSACGGEDIVADHFASYGTVIYESYGDFGQYTHEFDGDEEFHVDLEKKETVWRLPEFGEFATF
DPQGGLRNVATAKHNLDIWIKRSNSTAATNEVPEVTVFPKSPVMLGQPNTLICLVDNIFPPVIKVTWLRNGHSVSEGVFE
MSFLPKTDDSFLKISYLTFLPSADDIYDCKVEHWGLDEPLLKHWEPEIPTPVSELTETVVCALGLAVGFVGIVVGTFLII
RGVRSGGALRHQGCL
>gi|504157564|ref|XP_004590311.1| PREDICTED: mamu class II histocompatibility antigen, DR alpha chain-like [Ochotona princeps]
MTRCVVPVLGLFIMAFLMSPQGSWAIKEEHVIIQAEYYMSPGDDAGEFMFDFDGDEIFHVDLGKRETVWRLAEFGQFASF
EAQGALANIAVDKANLEIMMKRSNNTPDSSVSPEVTLLPSSPVELGEPNVLICFIDKFSPPVIKVTWLKNGKPVTVGVSE
TVYLPRDDHLFRKFHYLPFLPKAEDYYDCKVEHWGSEEPILKHWEFEPRIPLPETKENVVCALGLVVGLVGIIVGTIFII
KGMRQGNATERRGTL
>gi|339333301|emb|CBX60106.1| MHC class II antigen [Macaca fascicularis]
MILNKALMLGALALTTMMRPCGGEDIVADHVASYGVNVYQSYGLSGQYSHEFDGDEQFYVDLGRKETVWRLPILSQFSFD
PQFALRNIAVLTHNLNSLIKRSNSTAATNEVPEVTVFSKSPVTLGHPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSET
SFLSKSDHSFFKISYLTFLPSADEIYDCRVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSAGLVGIVVGTVLIIR
GLRSVGASRHQGPL
>gi|408717180|gb|AFU83036.1| MHC class II antigen [Equus caballus]
MILNRALILGALTLTTMMSACGGEDIVADHFASYGTNVYQSYGDFGQFTHEFDGDEEFHVDLEKKETVWRLPVFSEFTSF
DPQGALQNIATAKYNLDILIKLSNSTAATNEVPEVTVFPKSPVVLGQPNTLICLVDNIFPPVINITWLRNGHSVSEGVFE
MIFLPKTDDSFLKISYLTFLPSADDIYDCKVEHWGLDEPLLKHWEPEIPTPMSELTETVVCALGLAVGFVGIVVGTFLTI
RGLRSGGALRRQGCL
>gi|309400302|gb|ADO79577.1| MHC class II antigen [Microcebus murinus]
ILHTSLMLGALALATTVGPCGGEDIVADHVGAYGIHVYQSYGPAGQYTHEFDGDEEFYVDLQRRETVWRLPVFSKFTSFD
PQGALRNIATAKYNLDLLIKRSNSTAATNEVPEVTVFSKSPVMLGQPNTLICLVDNIFPPVINITWLGNGHPVTEGVSET
SFISKSDHSFLKISYLTFLPSADDIYDCKVEHWGLDEPLLKHWEPEVPAPMSELTETVVCALGLAVGLVGIVAGTVLIIR
GLRSGGASRQQGP
>gi|444526290|gb|ELV14286.1| HLA class II histocompatibility antigen, DP alpha 1 chain [Tupaia chinensis]
MFEFDEDKQFYVDLDKKETVWPLPEFIHAFDYDAQRGIADIVMTRGNLITMIQWSRHTQAIHEPPEVTVFPKEPVELGQP
NILICHVDKFFPPVLNITWLRNGQPVTEGVAETIFLPSTEFRFHKFHYLPFLPTAEDVYDCKVEHWGLDRPLLEHWEAQE
PIQLPEMMETMVCVLGLAVGLVGVIAVTIILQTRLTVSWAQEPP
>gi|635095913|ref|XP_007971187.1| PREDICTED: HLA class II histocompatibility antigen, DQ alpha 1 chain [Chlorocebus sabaeus]
MILNKALMLGALALTAVMSPCGGEDIVADHVASYGVNVYQSYGPSGQFTHEFDGDEQFYVDLGRKETVWRLPIPYRYGFD
PQFALRNIAVLTHNLNILIKRSNSTAATNEVPEVTVFSKSPVTLGHPNTLICLVDNIFPPVVNITWLSNGRSVTEGVSET
SFLSKSDHSFFKISYLTFLPSADEIYDCRVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSAGLVGIVVGTVLIIR
GLRSVGASRHQGPL
>gi|584082848|ref|XP_006761236.1| PREDICTED: SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like [Myotis davidii]
MALNRSLIWGALALTTMLSRCGGEDIVADHIGAYGGCFSQSYGPSGQYTFEFDGDETFHVDLEKRETVWRLPGLSEFGSF
DPQGGLSEAATARHNLDILIKCSNSTAVINEVPEVTVFPKAPVELGQPNTLICAVDNIFPPVINISWLSNGHSVTQGVSE
TSFLPKRDHSFLKISYLTFLPSADDVYDCKVEHWGLDQPLLRHWEPEIPAPMSELTETVVCALGLAVGLVGIVTGTVFII
QGLHPGGASRHQGPL
>gi|76446346|gb|ABA42959.1| MHC class II antigen alpha chain [Sus scrofa]
MVPGRVLMWGALALTTVMSACGGEDIAADHVASYGLNVYQSYGPSGYYTHEFDGDEEFYVDLEKKETVWRLPLFSEFTSF
DPQGALRNIATLKHNLNIVTKRSNNTAAVNQVPEVTVFSKSPVILGQPNTLICHVDSIFPPVINITWLKNGHSVKGFSET
SFLSKNDHSFLKISYLTFLPSDDDFYDCKVEHWGLDKPLLKHWEPEIPAPMSELTETVVCALGLIVGLVGIVVGTVFIIQ
GLRSGGPSRHQGSL
>gi|664780520|ref|XP_008509577.1| PREDICTED: LOW QUALITY PROTEIN: HLA class II histocompatibility antigen, DQ alpha 2 chain-like [Equus przewalskii]
MILNRALILGSLTLITMMSPCGGEDIVADHLGSYGTNVYQSYGPSGQFTHEFDGDEEFYVDLEKKETVWRLPLFSKFTSF
DPQGALRNIAXSKYNLDILIKLSNSTAATNEVPEVTVFPKSPVMLGQPSTLICLVDNIFPPVINVTWLKDGHSVTEGVSE
TSFLPKNDHSFFKMSYLTFLPYADDIYDCKVEHWGLDEPLLKHWEPXIPTPMSELTETVVCTLGLAMGLVDIVVGSILIS
RGLRSGDASRHQGPL
>gi|76446362|gb|ABA42967.1| MHC class II antigen alpha chain [Sus scrofa]
MVPGRVLMWGALALTAVMSACGGEDIAADHVASYGLNVYQSYGSSGYYTHEFDGDEQFYVDLEKKETVWQLPLFSKFTSF
DPQGALRNIAVGKLTLNILTKRSNNTAAVNKVPEVTVFSKSPVILGQPNTLICHVDSIFPPVINITWLKNGHSVTEGFSE
TSFLSKNDHPFLKISYLTFLPSDDDFYDCKVEHWGLDKPLLKHWEPEIPAPMSELTETVVCALGLIVGLVGIVVGTVFII
QGLRSGGPSRHQGSL
>gi|164550|gb|AAA31074.1| MHC class II DR-alpha, partial [Sus scrofa]
ALPTLIEASKEKMTILGVPVLGFVITILNLQKSWAIVENHVIIQAEFYLSPDKSGEFMFDFDGDEIFHVDMEKRETVWRL
EEFGHFASFEAQGALANIAVDKANLEILIKRSNNTPNTNVPPEVTVLSDKPVELGEPNILICFIDKFSPPVVNVTWLRNG
SPVTRGVSETVFLPREDHLFRKFHYLPFMPSTEDVYDCQVEHWGLDKPLLKHWEFEAQTPLPETTENTVCALGLIVALVG
IIVGTVLIIKGVR
>gi|309400304|gb|ADO79578.1| MHC class II antigen [Microcebus murinus]
ILHTSLMLGALALATTVGPCGGEDIVADHLGAYGINIYQSYGPAGQYTQEFDGDEEFYVDLQRKETVWRLPEFSKFTSFD
PQGALRNIATAKYNLDLLIKRSNSTAATNKVPEVTVFSKSPVMLGQPNTLICLVDNIFPPVINITWLGNGHSVTEGVSET
SFISKSDHSFLKISYLTFLPSADDVYDCKVEHWGLDEPLLKHWEPEVPAPMSELTETVVCALGLAVGLVGIVAGTVFIIQ
GLRSGGASRQQGP
>gi|338176989|gb|AEI83893.1| MHC class II antigen [Macaca fascicularis] >gi|571026308|emb|CDK12860.1| MHC class II protein [Macaca nemestrina]
MILNKALMLGALVLTTVMSPCGGEDIVADHVASYGVNVYQSYGLSGQYSHEFDGDEQFYVDLGRKETVWRLPILSQFSFD
PQFALRNIAVLTHNLNILIKRSNSTAATNEVPEVTVFSKSPVTLGHPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSET
SFLSKSDHSFFKISYLTFLPSADEIYDCRVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSAGLVGIVVGTVLIIR
GLRSVGASRHQGPL
>gi|76446352|gb|ABA42962.1| MHC class II antigen alpha chain [Sus scrofa]
MVPGRVLMWGALALTAVMSACGGEDIAADHVASYGLNVYQSYGPRGYYTHEFDGDEQFYVDLEKKETVWRLPLFSEFTSF
DPQGALRNIATLKHNLNIVTKRSNNTAAVNQVPEVTVFSKSPVILGQPNTLICHVDSIFPPVINITWLKNGHSVKGFSET
SFLSKNDHSFLKISYLTFLPSDDDFYDCKVEHWGLDKPLLKHWEPEIPAPMSELTETVVCALGLIVGLVGIVVGTVFIIQ
GLRSGGPSRHQGSL
>gi|52840209|gb|AAU88001.1| MHC class II antigen [Homo sapiens] >gi|52840233|gb|AAU88019.1| MHC class II antigen [Homo sapiens] >gi|84796225|gb|ABC66202.1| MHC class II antigen [Homo sapiens] >gi|84796229|gb|ABC66204.1| MHC class II antigen [Homo sapiens] >gi|84796231|gb|ABC66205.1| MHC class II antigen [Homo sapiens] >gi|401779711|emb|CCK73389.1| MHC class II antigen [Homo sapiens]
MILNKALMLGALALTTVTSPCGGEDIVADHVASYGVNLYQSYGPSGQYSHEFDGDEEFYVDLERKETVWQLPLFRRFRRF
DPQFALTNIAVLKHNLNIVIKRSNSTAATNEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSE
TSFLSKSDHSFFKISYLTFLPSDDEIYDCKVEHWGLDEPLLKHWEPEIPTPMSELTETVVCALGLSVGLVGIVVGTVLII
RGLRSVGASRHQGPL
>gi|20987327|gb|AAH29620.1| H2-Aa protein [Mus musculus]
MPCSRALILGVLALTTMLSLCGGEDDIEADHVGFYGIVVYQSPGDIGQYTHEFDGDEWFYVDLDKKETVWMLPEFGQLTS
FDPQGGLQNIATGKHNLGGWTKRSNFTPATNEAPQATVFPKSPVLLGQPNTLICFVDNIFPPVINITWLRNSKSVTDGVY
ETSFLVNRDHSFHKLSYLTFIPSDDDIYDCKVEHWGLDEPVLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTIFI
IQGLRSGGTSRPPGPL
>gi|30909253|gb|AAP37551.1| MHC class II antigen [Sus scrofa]
MVPGRVLMWGALALTAVMSACGGEDIAADHVASYGLNVYQSYGPRGYYTHEFDGDEQFYVDLEKKETVWRLPLFSEFTSF
DPQGALRNIATLKHNLNIVTKRSNNTAAVNKVPEVTVFSKSPVILGQPNTLICHVDSIFPPVINITWLKNGHSVKGFSET
SFLSKNDHSFLKISYLTFLPSDDDFYDCKVEHWGLDKPLLKHWEPEIPAPMSELTETVVCALGLIVGLVGIVVGTVFIIQ
GLRSGGPSRHQGSL
>gi|584060869|ref|XP_006774885.1| PREDICTED: SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like [Myotis davidii]
MILNRALIWGALALTTVLSRCGGEDIVAEHVGAYGISVYHSYGSWGQYTHEFDGDEEFYVDLDKRETVWRLPMFSEFRSF
DPQGGLREVATTRYNLDILIKRSNSTAAPNKVPEVTVFPKAPVELGQPNTLICAVDNIFPPVINISWLSNGHSVTQGVSE
TSFLSKSDDSFLKISYLTFLPSADDVYDCKVEHWGLDQPLLKHWEPEIPAPMSELTETVVCALGLAVGLVGIITGTVFII
QGLRPGGASRQQGAL
>gi|29888125|gb|AAP03010.1| MHC class II antigen [Sus scrofa]
MTILGVPVLGFVITILNLQKSWAIVENHVIIQAEFYLSPDKSGEFMFDFDGDEIFHVDMEKRETVWRLEEFGHFASFEAQ
GALANIAVDKANLEIVIKRSNNTPNTNVPPEVTVLSDKPVELGEPNILICFIDKFSPPVVNVTWLRNGSPVTRGVSETVF
LPREDHLFRKFHCLPFMPSTEDVYDCQVEHWGLDKPLLKHWEFEAQTPLPETTENTVCALGLIVALVGIIVGTVLIIKGV
RKGNATERRGPL
>gi|115527723|gb|AAI25045.1| HLA-DQA1 protein [Homo sapiens] >gi|649136040|gb|AIC59010.1| HLA-DQA1, partial [synthetic construct]
MILNKALMLGTLALTTVMSPCGGEDIVADHVASYGVNLYQSYGPSGQYTHEFDGDEQFYVDLGRKETVWCLPVLRQFRFD
PQFALTNIAVLKHNLNILIKRSNSTAATNEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSET
SFLSKSDHSFFKISYLTFLPSADEIYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVFIIR
GLRSVGASRHQGPL
>gi|18369835|gb|AAL67950.1| activated B cell RT1Bl alpha chain [Rattus norvegicus] >gi|54780916|gb|AAV40624.1| MHC class II antigen [Rattus norvegicus] >gi|54780918|gb|AAV40625.1| MHC class II antigen [Rattus norvegicus] >gi|56745087|gb|AAW28798.1| MHC class II antigen RT1.B alpha chain [Rattus norvegicus]
MPLSRALILGVLALTTMLSPCGGQDDIEADHVAAYGINMYQYYESRGQFTHEFDGDEEFYVDLDKKETIWRIPEFGQLTS
FDPQGGLQNIAIIKHNLEILMKRSNSTPAVNKVPEATVFSKSPVLLGQPNTLICFVDNIFPPVINITWLRNSKPVTEGVY
ETSFLSNPDHSFHKMAYLTFIPSNDDIYDCKVEHWGLDEPVLKHWEPEVPAPMSELTETVVCALGLSVGLVGIVVGTIFI
IQGLRSDGPSRHPGPL
>gi|573008345|emb|CDL68746.1| MHC class II DQA, partial [Ovis aries]
RALILGALALTTMMSPSGGEDIVADHIGSYGTTIYQSHGPSSQYTQEFDGDELFYVDLEKKETVWRLPMFSQFAGFNIQD
ALNNIPAAKHNLGILTKRSNFTPVINEVPEVTVFSKSPMMLGQPNTLICHVDNIFPPVINITWLKNGHAVTEGVYATSFL
PKDDHSFFKIGYLTFLPSDDDVYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLTVGLVGIVVGTIFIIQGLR
SGGASRHQGPL
>gi|371444188|gb|AEX28232.1| MHC class II antigen, partial [Ovis canadensis]
MAITRVPILGLFITVLISLQESWAIKEDHVIIQAEFYLNPEESAEFMFDFDGDEIFHVDMQKKETVWRLPEFGRFASFEA
QGALANMAVMKANLDIMIKRSNNTPNTNVPPEVTLLPNKPVELGEPNTLICFTDKFSPPVISVTWLRNGIPVTDGVSQTV
FLPRDDHLFRKFHYLPFLPTTEDVYDCKVEHRGLNEPLLKHWEYEAPAPLPETTENAVCALGLIVALVGIIAGTIFIIKG
VRKANTVEGRGPL
>gi|284192646|gb|ADB82915.1| MHC class II antigen [Sus scrofa]
MTILGVPVLGFVITILNFQKSWAIVENHVIIQAEFYLSPDKSGEFMFDSDGDEIFHVDMEKRETVWRLEEFGHFASFEAQ
GALANIAVDKANLEILIKRSNNTPNTNVPPEVTVLSDKPVELGEPNILICFIDKFSPPVVNVTWLRNGSPVTRGVSETVF
LPREDHLFRKFHYLPFMPSTEDVYDCQVEHWGLDKPLLKHWEFEAQTPLPETTENTVCALGLIVALVGIIVGTVLIIKGV
RKGNATEHRGPL
>gi|291395985|ref|XP_002714556.1| PREDICTED: SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like [Oryctolagus cuniculus]
MIPNKALILAALALTTMMSPCRAEDIVADHVGSYGINVYQSYGPSGQYTHEFDGDEQFYVDLDKKETIWRLSEFSRFASF
DPQGALGNIATAKYNLDIIIKRSNSTAAVNKVPEVTVFSKAPVRLGQPNTLICLVDNIFPPVINISWLINGHPVTEGVFE
TSFLSKSDHTFFKIGYLTFLPSADDIYDCRVEHWGLEKPLLRHWEPEIPAPMSELTETVVCALGLAVGLVGIIVGTILII
RGLRSGGASRQQGPL
>gi|29888121|gb|AAP03008.1| MHC class II antigen [Sus scrofa]
MVPGRVLMWGALALTAVMSACGGEDIAADHVASYGLNVYQPYGSSDYYTHEFDGDEQFYVDLEKKETVWKLPLFSKFTSF
DPQGALRNIAVGKLTLNILTKRSNNTAAVNKVPEVTVFSKSPVILGQPNTLICHVDSIFPPVINITWLKNGHSVTEGFSE
TSFLSRNDHSFLKISYLTFLPSDDDFYDCKVEHWGLDKPLLKHWEPEIPAPMSELTETVVCALGLIVGLVGIVVGTVLLI
RGLRSGGLSRHQGSL
>gi|545197058|ref|XP_005603560.1| PREDICTED: MHC class II DQ-alpha isoform X1 [Equus caballus]
MILNRALILGTLTLITMMSTCGGEDIVADHLGSYGTNVYQSYGPSGQFTHEFDGDEEFYVDLEKKETVWWLPMFSKFTSF
DPQGALRNIATSKYNLDILIKLSNSTAATNEVPEVTVFPKSPVMLGQPNTLICLVDNIFPPVINVTWLKDGHSVTEGVSE
TSFLPKNDHSFFKMSYLTFLPSADDIYDCKVEHWGLDEPLLKHWEPEIPTPVSELTETVVCALGLAMGLVDIVVGSILIS
RGLRSDHISCPVKQDQPSI
>gi|4106719|gb|AAD02920.1| MHC class II DQA precursor [Bos taurus]
MVLNRALILGTLALTTMMSPSGGEDIVADHVGIYGISIYQSYGPSGQYTHEFDGDEQFYVDLEKKETAWQLPLFSRMLSF
DPQLALRNIAIMKLHVDFLTKFSNSTAATNKVPEVTVFSKSPVMLGQPNTLICHVDNIFPPVINITWLRNGHSVTEGVSE
TSFLIRSDYSFLKIKYLAFLPSDDDIYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETVVCTLGLTMGLVGITVGTIFII
QGLRSGDPSRHQGPL
>gi|533150516|ref|XP_005389510.1| PREDICTED: SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like [Chinchilla lanigera]
MIPNKALVLGVFALTAVTSLCGGEDIEADHVGSFGISMYQSYGPSGQYTFELDGDEMFYVDLEKKQTEWRLPLFTEFTSF
DPQGGLREIATAKHNLGILIKSSNSTPATNKVPEVTVFPKSPVMVGEPNTLICVVDNIFPPVINITWLTNGHSVTEGVSE
TSFLSKSDHSFLKIAYLTFLPSEDDIYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLTVGLVGIVVGTIFII
RGLRSGSASRHLGPL
>gi|40556829|gb|AAR87772.1| MHC class II antigen alpha chain [Rattus norvegicus] >gi|54780946|gb|AAV40639.1| MHC class II antigen [Rattus norvegicus] >gi|54780948|gb|AAV40640.1| MHC class II antigen [Rattus norvegicus] >gi|54780952|gb|AAV40642.1| MHC class II antigen [Rattus norvegicus] >gi|54780956|gb|AAV40644.1| MHC class II antigen [Rattus norvegicus] >gi|54780958|gb|AAV40645.1| MHC class II antigen [Rattus norvegicus] >gi|54780960|gb|AAV40646.1| MHC class II antigen [Rattus norvegicus] >gi|56745091|gb|AAW28800.1| MHC class II antigen RT1.D alpha chain [Rattus norvegicus]
MATIGDLVIRFFFMAVLMSPQKSWAIREEHTIIQAEFYLSPDQNGEFMFDFDGDEIFHVDIKKSETIWRLEEFAQFASFE
AQGALANIAVDKANLDIMIKRSNNTPDANVIPEVTVLPKSPVNLGEPNILICFIDKFSPPAVNVTWLRNGQPVTKGVSET
VFLPREDHLFRKFHYLTFLPSTEDYYDCEVDHWGLEEPLRKHWEFEEKTLLPETKENVLCVLGLFVGLVGIVVGIVLIIK
GLRKRNAVERRQGAL
>gi|77539972|gb|ABA86858.1| MHC class II antigen [Homo sapiens]
MILNKALMLGTLALTTVMSPCGGEDIVADHVASYGVNLYQSYGPSGQYTHEFDGDEQFYVDLGRKETVWCLPVLRQFRXF
DPQFALTNIAVLKHNLNSLIKRSNSTAATNEVPEVTVFSKSPVTLGQPNILICLVDNIFPPVVNITWLSNGHSVTEGVSE
TIFLSKSDHSFFKISYLTLLPSAEESYDCKVEHWGLDKPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVFII
RGLRSVGASRHQGPL
>gi|34368394|emb|CAD86939.1| MHC class II antigen [Rattus norvegicus] >gi|54780950|gb|AAV40641.1| MHC class II antigen [Rattus norvegicus] >gi|54780954|gb|AAV40643.1| MHC class II antigen [Rattus norvegicus] >gi|54780962|gb|AAV40647.1| MHC class II antigen [Rattus norvegicus] >gi|54780964|gb|AAV40648.1| MHC class II antigen [Rattus norvegicus]
MATIGDLVIRFFFMAVLMSPQKSWAIREEHTIIQAEFYLSPDQNGEFMFDFDGDEIFHVDIKKSETIWRLEEFAQFASFE
AQGALANIAVDKANLDIMIKRSNNTPDANVIPEVTVLPKSPVNLGEPNILICFIDKFSPPAVNVTWLRNGQPVTKGVSET
VFLPREDHLFRKFHYLTFLPSVEDYYDCEVDHWGLEEPLRKHWEFEEKTLLPETKENVLCVLGLFVGLVGIVVGIVLIIK
GLRKRNAVERRQGAL
>gi|578840833|ref|XP_006725547.1| PREDICTED: HLA class II histocompatibility antigen, DQ alpha 1 chain isoform X1 [Homo sapiens] >gi|578842078|ref|XP_006726062.1| PREDICTED: HLA class II histocompatibility antigen, DQ alpha 1 chain isoform X1 [Homo sapiens] >gi|122188|sp|P01909.1|DQA1_HUMAN RecName: Full=HLA class II histocompatibility antigen, DQ alpha 1 chain; AltName: Full=DC-1 alpha chain; AltName: Full=DC-alpha; AltName: Full=HLA-DCA; AltName: Full=MHC class II DQA1; Flags: Precursor [Homo sapiens] >gi|1877200|emb|CAB06491.1| major histocompatibility complex, class II, DQ alpha 1 [Homo sapiens] >gi|2665521|gb|AAB91990.1| MHC class II DC-alpha [Homo sapiens] >gi|14250311|gb|AAH08585.1| HLA-DQA1 protein [Homo sapiens] >gi|52840192|gb|AAU87989.1| MHC class II antigen [Homo sapiens] >gi|52840221|gb|AAU88010.1| MHC class II antigen [Homo sapiens] >gi|123981264|gb|ABM82461.1| major histocompatibility complex, class II, DQ alpha 1 [synthetic construct] >gi|123996097|gb|ABM85650.1| major histocompatibility complex, class II, DQ alpha 1 [synthetic construct] >gi|307684600|dbj|BAJ20340.1| major histocompatibility complex, class II, DQ alpha 1 [synthetic construct] >gi|649100543|gb|AIC48934.1| HLA-DQA1, partial [synthetic construct]
MILNKALMLGALALTTVMSPCGGEDIVADHVASYGVNLYQSYGPSGQYTHEFDGDEQFYVDLGRKETVWCLPVLRQFRFD
PQFALTNIAVLKHNLNSLIKRSNSTAATNEVPEVTVFSKSPVTLGQPNILICLVDNIFPPVVNITWLSNGHSVTEGVSET
SFLSKSDHSFFKISYLTLLPSAEESYDCKVEHWGLDKPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVFIIR
GLRSVGASRHQGPL
>gi|207730|gb|AAA42366.1| MHC class II DR-alpha [Sciurus aberti]
MARSEVMVLGFFFMAVLMNPQESWAIKEEHSIIQAEFYLSPDQSGEFMFDFDGDEIFHVDVDKKETIWRLKEFGQFASFE
AQGALANIAVDKANLDIMIKRSNHTPDSNVPPEVTVLSNGPVELGEPNVLICFIDKFSPPVVNVRWLKNGEPVTTGVSET
VFLPRKDQLFRKFHYLLFLPSNEDFYDCEVDHLGLDRPLLKHWEFEEQTPLPETKENVVCALGLAVGLVGIVVGTIFIIK
GTRKNPTAERRGPL
>gi|84796227|gb|ABC66203.1| MHC class II antigen [Homo sapiens]
MILNKALMLGALALTTVTSPCGGEDIVADHVASYGVNLYQSYGPSGQYSHEFDGDEEFYVDLERKETVWQLPLFRRFRRF
DPQFALTNIAVLKHNLNIVIKRSNSTAATNEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSE
TSFLSKSDHSFFKISYLTFLPSDDEIYDCKVEHWGLDEPLLKHWEPEIPTPMSELTKTVVCALGLSVGLVGIVVGTVLII
RGLRSVGASRHQGPL
>gi|122195|sp|P20037.1|HA2B_RAT RecName: Full=Rano class II histocompatibility antigen, B alpha chain; AltName: Full=RT1 class II antigen, Ba chain; Flags: Precursor >gi|206802|gb|AAA42083.1| MHC RT1.B-alpha precursor [Rattus norvegicus]
MPLSRALILGVLALTTMLSPCGGQDDIEADHVGSYGITVYQYHESKGQYTHEFDGDERFYVDLDKKETIWRIPEFGQLIS
FDPQGALRNIAIIKHNLEILMKRSNSTPAVNEVPEATVFSKSPVLLGQPNTLICFVDNIFPPVINITWLRNSKPLTEGVY
ETSFLINSDYSFHKMAYLTFIPSNDDIYDCKVEHWSLDEPVLRHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTIFI
IQGLRSVAPSRHPGPL
>gi|207708|gb|AAA42355.1| MHC class II DR-alpha [Sciurus aberti] >gi|207716|gb|AAA42359.1| MHC class II DR-alpha [Sciurus aberti] >gi|207718|gb|AAA42360.1| MHC class II DR-alpha [Sciurus aberti] >gi|207720|gb|AAA42361.1| MHC class II DR-alpha [Sciurus aberti] >gi|207724|gb|AAA42363.1| MHC class II DR-alpha [Sciurus aberti] >gi|207726|gb|AAA42364.1| MHC class II DR-alpha [Sciurus aberti] >gi|207728|gb|AAA42365.1| MHC class II DR-alpha [Sciurus aberti] >gi|207732|gb|AAA42367.1| MHC class II DR-alpha [Sciurus aberti]
MARSEVMVLGFFFMAVLMNPQESWAIKEEHSIIQAEFYLSPDQSGEFMFDFDGDEIFHVDVDKKETIWRLKEFGQFASFE
AQGALANIAVDKANLDIMIKRSNHTPDSNVPPEVTVLSSGPVELGEPNVLICFIDKFSPPVVNVRWLKNGEPVTTGVSET
VFLPRKDQLFRKFHYLLFLPSNEDFYDCEVDHLGLDRPLLKHWEFEEQTPLPETKENVVCALGLAVGLVGIVVGTIFIIK
GTRKNPTAERRGPL
>gi|122197|sp|P04228.1|HA2D_MOUSE RecName: Full=H-2 class II histocompatibility antigen, A-D alpha chain; Flags: Precursor [Mus musculus] >gi|199450|gb|AAA39615.1| MHC H2-IA-alpha [Mus musculus domesticus]
MPCSRALILGVLALNTMLSLCGGEDDIEADHVGFYGTTVYQSPGDIGQYTHEFDGDELFYVDLDKKKTVWRLPEFGQLIL
FEPQGGLQNIAAEKHNLGILTKRSNFTPATNEAPQATVFPKSPVLLGQPNTLICFVDNIFPPVINITWLRNSKSVTDGVY
ETSFLVNRDHSFHKLSYLTFIPSDDDIYDCKVEHWGLEEPVLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTIFI
IQGLRSGGTSRHPGPL
>gi|532035178|ref|XP_005360488.1| PREDICTED: h-2 class II histocompatibility antigen, E-U alpha chain-like [Microtus ochrogaster]
MATSGALVLRLFFMAVLMRPQKSWAIKEEHRIIQAEFFLSPDDKGEFMFDFDGDEIFHVDIGKSETIWRLKEFGQFASFE
AQGALANLAVDKANLEIMIKRSNHTPAANVSPDVTVLTDSPASLGEPNTLICFVDKFSPPVVNVTWLRNGQPVTTGVSET
VFLPRDDHLFRKFYYLTFLPSTEDYYDCRVEHWGLEEPLLKHWEFEEQTLLPETKENVVCALGLFLGLVGIIAGVVFIIK
GMQRRTAADRRQGAL
>gi|60592980|ref|NP_001012695.1| major histocompatibility complex, class II, DR alpha precursor [Bos taurus] >gi|555998445|ref|XP_005910934.1| PREDICTED: mamu class II histocompatibility antigen, DR alpha chain-like [Bos mutus] >gi|790950|dbj|BAA07173.1| BoLA-DR-alpha [Bos taurus] >gi|1617021|emb|CAA55117.1| MHC class II DR-ALPHA [Bos taurus] >gi|59858483|gb|AAX09076.1| major histocompatibility complex, class II, DR alpha precursor [Bos taurus] >gi|148745470|gb|AAI42120.1| Major histocompatibility complex, class II, DR alpha [Bos taurus] >gi|296474340|tpg|DAA16455.1| TPA: major histocompatibility complex, class II, DR alpha [Bos taurus] >gi|594550906|gb|AHM09958.1| MHC class II antigen [Bos frontalis]
MAITRVPILGLFITVLIGLQESWAIKENHVIIQAEFYLKPEESAEFMFDFDGDEIFHVDMGKKETVWRLPEFGHFASFEA
QGALANMAVMKANLDIMIKRSNNTPNTNVPPEVTLLPNKPVELGEPNTLICFIDKFSPPVISVTWLRNGKPVTDGVSQTV
FLPRNDHLFRKFHYLPFLPTTEDVYDCKVEHLGLNEPLLKHWEYEAPAPLPETTENAVCALGLIVALVGIIAGTIFIIKG
VRKANTVERRGPL
>gi|2304947|gb|AAB65588.1| MHC class II antigen, partial [Felis catus]
FYLKPDSSGEFMFDFDGDEIFHVDMEKKETVWRLEEFGRFASFEAQGALANIAVDKANLDILIKRSNNTPNTNEPPEVTV
LSNSPVELGEPNILICFIDKFSPPVINVTWLRNGKPVTTGVSETVFLPREDHLFRKFHYLPFLPSTEDVYDCKVEHWGLD
EPLLKHWVFDAPTPLPETTENVVCALGLVVGLVGIIVGTIFIIKGMRKVNARERRGAL
>gi|309400306|gb|ADO79579.1| MHC class II antigen [Microcebus murinus]
ILHTSLMLGALALATTVGPCGGEDIVADHVGAYGINVYQSYGPSGQYTHEFDGDEEFYVDLQRRETVWRLPEFSEFTSFD
PQGALREIATAKYNLDLLIKGSNSTAATNVVPEVTVFSKSPVMLGQPNTLVCLVDNIFPPVINITWLGNGHLVTEGVSET
SFISKSDHSFLKISYLTFLPSADDVYDCKVEHWGLDEPLLKHWEPEVPAPMSELTETVVCALGLAVGLVGIVAGTVLIIR
GLRSGGASRQQGP
>gi|220981790|emb|CAX17687.1| MHC class II antigen [Bos indicus] >gi|220981792|emb|CAX17688.1| MHC class II antigen [Bos indicus]
ITRVPILGLFITVLIGLQESWAIKENHVIIQAEFYLKPEESAEFMFDFDGDEIFHVDMGKKETVWRLPEFGHFASFEAQG
ALANMAVMKANLDIMIKRSNNTPNTNVPPEVTLLPNKPVELGEPNTLICFIDKFSPPVISVTWLRNGKPVTDGVSQTVFL
PRNDHLFRKFHYLPFLPTTEDVYDCKVEHLGLNEPLLKHWEYEAPAPLPETTENAVCALGLIVALVGIIAGTIFIIKGVR
KANTVERRGPL
>gi|283857931|gb|ADB45846.1| MHC class II antigen [Sus scrofa]
MTILGVPVLGFVITISNLQKSRAIVENHVIIQAEFYLSPDKSGEFMFDFDGDEIFHVDMEKRETVWRLEEFGHFASFEAQ
GALANIAVDKANLEIMIKRSNNTPNTNVPPEVTVLSDKPVELGEPNILICFIDKFSPPVVNVTWLRNGSPVTRGVSETVF
LPREDHLFRKFHYLPFMPSTGDVYDCQVEHWGLDKPLLEHWEFEAQTPLPETTENTVCALGLIVALVGIIVGTVLIIKGV
RKGNATERRGPL
>gi|4884623|gb|AAD31756.1|AF119253_1 MHC class II antigen IE alpha [Mus musculus] >gi|4884625|gb|AAD31757.1|AF119254_1 MHC class II antigen IE alpha [Mus musculus]
RSRALILGVLALTTMLSLCGGEDYIEADHVAFYGISVYQSPGDIGQYTFEFDGDELFYVDLDKKETVWMLPEFGQLTSFD
PQGGLQEIATGKYNLEILIKDSNFTPAANEAPQATVFPKSPVLLGQPNTLICFVDNIFPPVINITWLRNSKSVTDGVYET
SFLVNRDHSFHKLSYLTFIPSDDDIYDCKVEHWGLEEPVLKHWEPEIPAPMSELTETVICALGLSVGLVGIVVGTIFIIQ
GLRSGGTSRHPGPL
>gi|34368390|emb|CAD86937.1| MHC class II antigen [Rattus norvegicus]
RALILGVLALTTMLSPCGGQDDIEADHVGSYGITVYQYYESKGQYTHEFDGDERFYVDLDKKETIWRIPEFGQLTSFDPQ
GALQSIATIKYNLEILTKRSNSTSAVNEVPEATVFSKSPVLLGQPNTLICFVDNIFPPVINITWLRNSKPVTEGVYETSF
LSNPDHSFHKMAYLTFIPSNDDIYDCKVEHWGLDEPVLRHWEPEVPAPMSELTETVVCALGLSVGLVGIVVGTIFIIKGL
RSGGSSRHPGPL
>gi|122200|sp|P23150.1|HA2J_MOUSE RecName: Full=H-2 class II histocompatibility antigen, I-E alpha chain; Flags: Precursor, partial [Mus musculus] >gi|51527|emb|CAA36865.1| I-A alpha NON protein (254 AA) [Mus musculus]
RSRALILGVLALTTMLSLCGGEDDIEADHVAFYGISVYQSPGDIGQYTFEFDGDELFYVDLDKKETVWMLPEFGQLTSFD
PQGGLQEIATGKYNLEILIKDSNFTPAANEAPQATVFPKSPVLLGQPNTLICFVDNIFPPVINITWLRNSKSVTDGVYET
SFLVNRDHSFHKLSYLTFIPSDDDIYDCKVEHWGLEEPVLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTIFIIQ
GLRSGGTSRHPGPL
>gi|432106479|gb|ELK32237.1| SLA class II histocompatibility antigen, DQ haplotype D alpha chain [Myotis davidii]
MALNRSLIWGALALTTMLSRCGGEDIVADHIGAYGGCFSQSYGPSGQYTFEFDGDETFHVDLEKRETVWRLPGLSEFGSF
DPQGGLSEAATARHNLDILIKCSNSTAVINEVPEVTVFPKAPVELGQPNTLICAVDNIFPPVINISWLSNGHSVTQGVSE
TSFLPKRDHSFLKISYLTFLPSADDVYDCKVEHWGLDQPLLRHWEPEIPAPMSELTETVVCALGLAVGLVGIVTGTVFII
QGLHPGGASRHQGPLCVANLKSRRVDMLGDLHYSLAKSIICLLSSNAPPVISSLGLKVLCPRRVHKPLEFSPSLLTL
>gi|207714|gb|AAA42358.1| MHC class II DR-alpha, partial [Sciurus aberti]
RSEVMVLGFFFMAVLMNPQESWAIKEEHSIIQAEFYLSPDQSGEFMFDFDGDEIFHVDVDKKETIWRLKEFGQFASFEAQ
GALANIAVDKANLDIMIKRSNHTPDSNVPPEVTVLSSGPVELGEPNVLICFIDKFSPPVVNVRWLKNGEPVTTGVSETVF
LPRKDQLFRKFHYLLFLPSNEDFYDCEVDHLGLDRPLLKHWEFEEQTPLPETKENVVCALGLAVGLVGIVVGTIFIIKGT
RKNPTAERRGPL
>gi|54780922|gb|AAV40627.1| MHC class II antigen [Rattus norvegicus] >gi|54780924|gb|AAV40628.1| MHC class II antigen [Rattus norvegicus] >gi|542130300|gb|AGV39043.1| RT1-Ba [Rattus norvegicus]
MPLSRALILGVLALTTMLSPCGGQDDIEADHVGSYGITVYQYYESKGQYTHEFDGDERFYVDLDKKETIWRIPEFGQLTS
FDPQGALQSIATIKYNLEILTKRSNSTSAVNEVPEATVFSKSPVLLGQPNTLICFVDNIFPPVINITWLRNSKPVTEGVY
ETSFLSNPDHSFHKMAYLTFIPSNDDIYDCKVEHWGLDEPVLRHWEPEVPAPMSELTETVVCALGLSVGLVGIVVGTIFI
IKGLRSGGSSRHPGPL
>gi|166795893|ref|NP_001107534.2| SLA class II histocompatibility antigen, DQ haplotype D alpha chain precursor [Sus scrofa] >gi|30909261|gb|AAP37555.1| MHC class II antigen [Sus scrofa]
MVPGRVLMWGALALTTVMSACGGEDIAADHVASYGLNVYQSYGPSGYFTHEFDGDEEFYVDLEKKETVWRLPLFSEFTSF
DPQGALRNIATLKHNLNIVTKRSNNTAAVNQVPEVTVFSKSPVILGQPNTLICHVDSIFPPVINITWLKNGHSVKGFSET
SFLSKNDHSFLKISYLTFLPSDDDFYDCKVEHWGLDKPLLKHWEPEIPAPMSELTETVVCALGLIVGLVGIVVGTVFIIQ
GLLSGGPSRHQGSL
>gi|57114292|ref|NP_001008847.1| RT1 class II, locus Da precursor [Rattus norvegicus] >gi|46237568|emb|CAE83948.1| RT1 class II, D alpha [Rattus norvegicus] >gi|71051105|gb|AAH98677.1| Histocompatibility 2, class II antigen E alpha [Rattus norvegicus] >gi|149043345|gb|EDL96796.1| rCG60548 [Rattus norvegicus] >gi|542130272|gb|AGV39029.1| RT1-Da [Rattus norvegicus] >gi|542130274|gb|AGV39030.1| RT1-Da [Rattus norvegicus] >gi|542130276|gb|AGV39031.1| RT1-Da [Rattus norvegicus] >gi|542130278|gb|AGV39032.1| RT1-Da [Rattus norvegicus]
MATLGDLVIRFFFMAVLMSPQKSWAIREEHTIIQAEFYLSPDQNGEFMFDFDGDEIFHVDIKKSETIWRLEEFAQFASFE
AQGALANIAVDKANLDIMIKRSNNTPDANVIPEVTVLPKSPVNLGEPNILICFIDKFSPPAVNVTWLRNGQPVTKGVSET
VFLPREDHLFRKFHYLTFLPSTEDYYDCEVDHWGLEEPLRKHWEFEEKTLLPETKENVLCVLGLFVGLVGIVVGIVLIIK
GLRKRNAVERRQGAL
>gi|542130280|gb|AGV39033.1| RT1-Da [Rattus norvegicus]
MATLGDLVIRFFFMAVLMSPQKSWAIREEHTIIQAEFYLSPDQNGEFMFDFDGDEIFHVDIKKSETIWRLEEFAQFASFE
AQGALANIAVDKANLDIMIKRSNNTPDANVIPEVTVLPKSPVNLGEPNILICFIDKFSPPAVNVTWLRNGQPVTKGVSET
VFLPREDHLFRKFHYLTFLPSVEDYYDCEVDHWGLEEPLRKHWEFEEKTLLPETKENVLCVLGLFVGLVGIVVGIVLIIK
GLRKRNAVERRQGAL
>gi|378556227|gb|AFC17944.1| MHC class II antigen [Bos grunniens x Bos taurus] >gi|594550908|gb|AHM09959.1| MHC class II antigen [Bos frontalis x Bos taurus]
MAITRVPILGLFITVLIGLQESWAIKENHVIIQAEFYLKPEESAEFMFDFDGDEIFHVDMGKKETVWRLPEFGHFASFEA
QGALANMAVMKANLDIMIKRSNNTPNTNVPPEVTLLPNKPVELGEPNTLICFIDKFSPPVISVTWLRNGKPVTDGVSQTV
FMPRNDHLFRKFHYLPFLPTTEDVYDCKVEHLGLNEPLLKHWEYEAPAPLPETTENAVCALGLIVALVGIIAGTIFIIKG
VRKANTVERRGPL
>gi|219521350|gb|AAI71877.1| Unknown (protein for MGC:198592) [Homo sapiens]
MILNKALMLGALALTTVMSPCGADHVASYGVNLYQSYGPSGQYSHEFDGDEEFYVDLERKETVWQLPLFRRFRRFDPQFA
LTNIAVLKHNLNIVIKRSNSTAATNEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSETSFLS
KSDHSFFKISYLTFLPSADEIYDCKVEHWGLDEPLLKHWEPEIPTPMSELTETVVCALGLSVGLVGIVVGTVLIIRGLRS
VGASRHQGPL
>gi|207712|gb|AAA42357.1| MHC class II DR-alpha, partial [Sciurus aberti]
ARSEVMVLGFSFMAVLMNPQESWAIKEEHSIIQAEFYLSPDQSGEFMFDFDGDEIFHVDVDKKETIWRLKEFGQFASFEA
QGALANIAVDKANLDIMIKRSNHTPDSNVPPEVTVLSSGPVELGEPNVLICFIDKFSPPVVNVRWLKNGEPVTTGVSETV
FLPRKDQLFRKFHYLLFLPSNEDFYDCEVDHLGLDRPLLKHWEFEEQTPLPETKENVVCALGLAVGLVGIVVGTIFIIKG
TRKNPTAERRGPL
>gi|573008353|emb|CDL68750.1| MHC class II DQA, partial [Ovis aries]
LILGVLALTTMTSPCGGEDIVADHVGIYGTDFYQSHGPSGEYIHLFDGDEEFYVDLEKKETVWRLPMFDELRRFDPQGAL
NNIAIAKHNLDILTKRYNFTPVINEVPEVTVFSKSPVMLGQPNTLICHVDNIFPPVINITWLRNGHAVTEHVSETSFLLR
SDYSYLKISYLTFLPSDDDVYDCKVEHWGLEEPLLKHWEPETPAPMSELTETVVCALGLTVGLVGIVVGTVLIIRGLRSG
GTSRHQGPL
>gi|617622642|ref|XP_007527469.1| PREDICTED: mamu class II histocompatibility antigen, DR alpha chain [Erinaceus europaeus]
MALHGDLVLGCFITIVLMNFQKSWAITEKHVIIQMETYMKPDIAGEFMFDFDGDEIFHVDVKKRETVWRLEEFGRFASFE
AQGALANLAVDKANLDIWIKRSNNTPNTNVPPEVTVLPQKPVELGEPNILICFIDKFSPPVVNVTWLKNGKPVTTGVSDT
IILPRDDHLFRKFHYLTFLPSSEDFYDCKVEHWGLDEPLLKHWEFEALSPLPETTENVMCVLGLVLGLAGIILGTIFIIK
GVRKGNAVERRGPL
>gi|512021943|ref|XP_004828189.1| PREDICTED: HLA class II histocompatibility antigen, DQ alpha 2 chain-like [Mustela putorius furo]
MTLNRVLILGTLALTTVMSPGGSEDIVADHAASYGINVYQSYGPSAQYTHEFDGDEEFYVDLEKKETVWQLPMFQTLGSF
DPQGALRNLAVSKQNLNILTKRSNYTAATNEVPETTLFLKSPVMLGQPNTLICLVDNIFPPVINVTWLKNRHSVTEGVSE
TSFLAKKDHSFLKFSYLTFLPSADDIYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLTVGLVGIVVGTVFIV
QGLRSSGASRHQGPL
>gi|470900657|emb|CCV19549.1| MHC class II antigen [Homo sapiens] >gi|538258875|emb|CDG66212.1| MHC class II antigen [Homo sapiens] >gi|600971535|emb|CDO39025.1| MHC class II antigen [Homo sapiens]
MILNKALMLGALALTTVMSPCGGEDIVADHVASYGVNLYQSYGPSGQYTHEFDGDEQFYVDLGRKETVWCLPVLRQFRFD
PQFALTNIAVLKHNLNSLIKRSNSTAATNEVPEVTVFSKSPVTLGQPNILICLVDNIFPPVVNITWLSNGHSVTEGVSET
SFLSKSDHSFFKISYLTLLPSSEESYDCKVEHWGLDKPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVFIIR
GLRSVGASRHQGPL
>gi|83308058|emb|CAJ14961.1| human leucocyte antigen DQA1 [Homo sapiens]
MILNKALMLGTLALTTVMSPCGGKDIVADHVASYGVNLYQSYGPSGQYTHEFDGDEQFYVDLGRKETVWCLPVLRQFRFD
PQFALTNIAVLKHNLNSLIKRSNSTAATNEVPEVTVFSKSPVTLGQPNILICLVDNIFPPVVNITWLSNGHSVTEGVSET
SFLSKSDHSFFKISYLTLLPSAEESYDCKVEHWGLDKPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVFIIR
GLRSVGASRHQGPL
>gi|54780906|gb|AAV40619.1| MHC class II antigen [Rattus norvegicus] >gi|54780910|gb|AAV40621.1| MHC class II antigen [Rattus norvegicus] >gi|542130292|gb|AGV39039.1| RT1-Ba [Rattus norvegicus] >gi|542130296|gb|AGV39041.1| RT1-Ba [Rattus norvegicus]
MPLSRALILGVLALTTMLSPCGGQDDIEADHVGSYGIEMYQYYKSRGQYTFEFDGDEKFYVDLDKKETIWRIPEFGQLTS
FDPQGGLQEMATAKHNLELLIKRSNSTPAVNEVPEATVFSKSPVLLGQPNTLICFVDNIFPPVINITWLRNSKPVTEGVY
ETSFLSNPDHSFHKMSYLTFIPSNDDIYDCKVEHWGLDKPVLRHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTIFI
IQGLRSDGSSRHPGPL
>gi|395832104|ref|XP_003789116.1| PREDICTED: SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like [Otolemur garnettii]
MTLNTVLMLGTLILAIMMIPCGGEDIVADHVGIYGLNVYQSYGSSGQYTQEFDGDEMFYVDLERKETVWRLPEFSTFAGF
DPQGGLREIATAKHNMETLTKRSNSTAAPKKVPEVTVFPKSPVMLGQPNTLICLVDSIFPPVINITWLSNGHSVTEGVSE
TSFLSKSDHSFLKISYLTFLPSDDVVYDCKVEHWGLDKPLLKHWEPDIPASMSELTETVICALGLAVGLVGIVVGTILII
RGLRSGGTSRQQGSL
>gi|27882598|gb|AAH43925.1| H2-Aa protein [Mus musculus]
MPCSRALILGVLALTTMLSLCGGEDDIEADHVGVYGTTVYQSPGDIGQYTHEFDGDEWFYVDLDKKETIWMLPEFGQLTS
FDPQGGLQNIATGKYTLGILTKRSNSTPATNEAPQATVFPKSPVLLGQPNTLICVVDNIFPPVINITWLRNSKSVTDGVY
ETSFLVNRDHSFHKLSYLTFIPSDDDIYDCKVEHWGLEEPVLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTIFI
IQGLRSGGTSRHPGPL
>gi|390408497|gb|AFL71083.1| MHC class II antigen [Bos grunniens]
MAITRSQILGLFITVLIGLQESWAIKENHVIIQAEFYLKPEESAEFMFDFDGDEIFHVDMGKKETVWRLPEFGHFASFEA
QGALANMAVMKANLDIMIKRSNNTPNTNVPPEVTLLPNKPVELGEPNTLICFIDKFSPPVISVTWLRNGKPVTDGVSQTV
FMPRNDHLFRKFHYLPFLPTTEDVYDCKVEHLGLNEPLLKHWEYEAPAPLPETTENAVCALGLIVALVGIIAGTIFIIKG
VRKANTVERRGPL
>gi|511926572|ref|XP_004782406.1| PREDICTED: HLA class II histocompatibility antigen, DQ alpha 2 chain-like [Mustela putorius furo]
MTLNRVLILGTLALTTVMSPGGSEDIVADHAASYGINVYQSYGPSAQYTHEFDGDEEFYVDLEKKETVWQLPMFQTLGSF
DPQGALRNLAVSKQNLNILTKRSNYTAATNEVPETTLFLKSPVMLGQPNTLICLVDNIFPPVINVTWLKNRHSVTEGVSE
TSFLAKKDHSFLKFSYLTFLPSADDIYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVFIV
QGLRSSGASRHQGPL
>gi|52840173|gb|AAU87975.1| MHC class II antigen [Homo sapiens] >gi|52840229|gb|AAU88016.1| MHC class II antigen [Homo sapiens] >gi|52840241|gb|AAU88025.1| MHC class II antigen [Homo sapiens] >gi|397174432|emb|CCJ51907.1| MHC class II antigen [Homo sapiens]
MILNKALMLGTLALTTVMSPCGGEDIVADHVASYGVNLYQSYGPSGQYTHEFDGDEQFYVDLGRKETVWCLPVLRQFRFD
PQFALTNIAVLKHNLNSLIKRSNSTAATNEVPEVTVFSKSPVTLGQPNILICLVDNIFPPVVNITWLSNGHSVTEGVSET
SFLSKSDHSFFKISYLTLLPSAEESYDCKVEHWGLDKPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVFIIR
GLRSVGASRHQGPL
>gi|477184|pir||A48381 MHC class II histocompatibility antigen alpha chain - sheep
IKEDHVIIQAEFYLNPEESAEFMFDFDGDEIFHVDMQKKETVWRLPEFGHFASFEAQGALANMAVMKANLDIMIKRSNNT
PNTNVPPEVTLLPNKPVELGEPNTLICFIDKFSPPVISVTWLRNGIPVTDGVSQTVFLPRDDHLFRKFHYLPFLPTTEDV
YDCKVEHWGLNEPLLKHWEYEAPAPLPETTENAVCALGLIVALVGIIAGTIFIIKGVRKANTVEGRGPL
>gi|337272854|gb|AEI70187.1| MHC class II antigen [Macaca fascicularis] >gi|584450080|emb|CDM15110.1| MHC class II protein [Macaca nemestrina] >gi|629265972|dbj|BAO74105.1| MHC class II antigen [Macaca fascicularis] >gi|671708699|gb|AII81866.1| MHC class II antigen [Macaca nemestrina]
MILNKALLLGALALTTVMSPCGGEDIVADHVASYGVNLYQSYGPSGQFTHEFDGDEEFYVDLERKETVWQLPLFSKFRSF
DPQGALRNLAVGKHNLNILIKRSNSTAATNEVPEVTVFSKSPVTLGHPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSE
TSFLSKSDHSFFKISYLTFLPSADEIYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSMGLVGIVVGTVLII
RGLRSVGASRHQGPL
>gi|77539960|gb|ABA86856.1| MHC class II antigen [Homo sapiens]
MILNKALMLGALALTTVMSPCGGEDIVADHVASYGVNLYQSYGPSGQYTHEFDGDEQFYVDLGRKETVWCLPVLRQFRXF
DPQFALTNIAVLKHNLNSLIKRSNSTAATNEVPEVTVFSKSPVTVGQPNILICLVDNIFPPVVNITWLSNGHSVTEGVSE
TSFLSKSDHSFFKISYLTLLPSSEESYDCKVEHWGLDKPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVFII
RGLRSVGASRHQGPL
>gi|507985799|ref|XP_004695741.1| PREDICTED: SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like isoform X1 [Condylura cristata]
MALYRALILGALTLTTLRSPCGGEDIEADHVGIYGTNIYQSYGPSGQYTQEFDGDELFYVDLQKKETVWRLPEFSTFASF
DPQFGITEIATAKYNLDILIKSSNYTAATNEVPGVTVFTKSPVTLAKPNTLICFVDNIFPPVINITWLVNGHSVTEGVSE
TSFLPKSDQCFFKISYLVFVPSDDDVYDCKVEHWGLEEPLLKHWEPETPAPLSELTETVVCALGLAVGLIGIVLGTILII
RGLRSGGASRHQGPL
>gi|54780912|gb|AAV40622.1| MHC class II antigen [Rattus norvegicus]
MPLSRALILGVLALTTMLSPCGGQDDIEADHVGSYGIEMYQYYKSRGQYTFEFDGDEEFYVDLDKKETIWRIPEFGQLTS
FDPQGGLQEMATAKHNLELLIKRSNSTPAVNEVPEATVFSKSPVLLGQPNTLICFVDNIFPPVINITWLRNSKPVTEGVY
ETSFLSNPDHSFHKMSYLTFIPSNDDIYDCKVEHWGLDEPVLRHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTIFI
IQGLRSDGSSRHPGPL
>gi|165494|gb|AAA31397.1| MHC RLA-DQ-alpha (AA at 244), partial [Oryctolagus cuniculus]
DHVGSYGINVYQSYGPSGQYTHEFDGDEQFYVDLDKKETIWRLSEFSRFASFDPQGALGNIATAKYNLDIIIKRSNSTAA
VNKVPEVTVFSKAPVRLGQPNTLICLVDNIFPPVINISWLINGHPVTEGVFETSFLSKSDHTFFKIGYLTFLPSADDIYD
CRVEHWGLEKPLLRHWEPEIPAPMSELTETVVCALGLAVGLVGIIVGTILIIRGLRSGGASRQQGPL
>gi|403307766|ref|XP_003944354.1| PREDICTED: mamu class II histocompatibility antigen, DR alpha chain-like [Saimiri boliviensis boliviensis]
MAVSGVSVLGFFLMIVLMSPQESWAIKEEHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDVTKKETVWRLEEFGKFASFE
AQGALANIAVDKANLEIMTKRSNNTPISNVPPEVTVLTDSPVELGEPNILICFVDKFTPPAVKVTWLQNGKPVTTGVSET
VFLPREDHLFRKFYYLPFLPSTEDIYDCKVEHWGLDEPLLKHWEYDAPSPLPETTENVVCALGLIVGLVGIVVGTIFIIK
GVRKSNATDRRGPL
>gi|220681924|gb|ACL80120.1| MHC class II antigen [Macaca mulatta]
MMILNKALLLGALALTTVMSPCGGEDIVADHVASYGVNMYQSYGPSGQYTHEFDGDEEFYVDLERKETVWQLPLFSKFRS
FDPQGALRNLAVGKHNLNILIKRSNSTAATNEVPEVTVFSKSPVTLGHPNTLICLVDNIFPPVVNITWLSNGRSVTEGVS
ETSFLSKSDHSFFKISYLTFLPSADEIYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSMGLVGIVVGTVLI
IRGLRSVGASRHQGPL
>gi|512862494|ref|XP_004890161.1| PREDICTED: HLA class II histocompatibility antigen, DQ alpha 2 chain-like [Heterocephalus glaber] >gi|512969536|ref|XP_004846923.1| PREDICTED: HLA class II histocompatibility antigen, DQ alpha 2 chain-like [Heterocephalus glaber] >gi|351703558|gb|EHB06477.1| HLA class II histocompatibility antigen, DQ alpha 1 chain [Heterocephalus glaber]
MILNKALILGVFALTTLMSSCGGEDIVADHVASYGVNVYQSYGPSGQYTHEFDGDEQFYVDLKKKETIFWLPGLNKVAGF
DPQGALNNIAIGKHNLDIITQHSNSTAATNEVPEVTVFPKSPVVLGQPNILICLVDNIFPPVINITWLSNGRSVTEGVSE
TSFLSKSDHSFLKMAYLTFLPSADDVYDCKVEHWGLDEPLLKHWEPEIPAPMSEVTETVVCALGLSVGLVGIIVGTVFII
QGLRSAGASRHPGPL
>gi|125489004|gb|ABN42663.1| MHC class II antigen DQ alpha chain [Macaca fascicularis] >gi|343094717|emb|CCC54326.1| MHC class II antigen [Macaca fascicularis] >gi|634721488|emb|CDO50359.1| MHC class II protein [Macaca nemestrina]
MILNKALLLGALALTTVMSPCGGEDIVADHVASYGVNMYQSYGPSGQYTHEFDGDEEFYVDLERKETVWQLPLFSKFRSF
DPQGALRNLAVGKHNLNILIKRSNSTAATNEVPEVTVFSKSPVTLGHPNTLICLVDNIFPPVVNITWLSNGRSVTEGVSE
TSFLSKSDHSFFKISYLTFLPSADEIYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSMGLVGIVVGTVLII
RGLRSVGASRHQGPL
>gi|671708697|gb|AII81865.1| MHC class II antigen [Macaca nemestrina]
MILNKALLLGALALTTVMSPCGGEDIVADHVASYGVNLYQSYGPSGQYTHEFDGDEEFYVDLERKETVWQLPLFSKFRSF
DPQGALRNLAVGKHNLNILIKRSNSTAATNEVPEVTVFSKSPVTLGHPNTLICLVDNIFPPVVNITWLSNGRSVTEGVSE
TSFLSKSDHSFFKISYLTFLPSADEIYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSMGLVGIVVGTVLII
RGLRSVGASRHQGPL
>gi|73586517|gb|AAI02054.1| Major histocompatibility complex, class II, DR alpha [Bos taurus]
MAITRVPILGLFITVLIGLQESWAIKENHVIIQAEFYLKPEESAEYMFDFDGDEIFHVDMGKKETVWRLPEFGHFASFEA
QGALANMAVMKANLDIMIKRSNNTPNTNVPPEVTLLPNKPVELGEPNTLICFIDKFSPPVISVTWLRNGKPVTDGVLQTV
FLPRNDHLFRKFHYLPFLPTTEDVYDCKVEHLGLNEPLLKHWEYEAPAPLPETTENAVCALGLIVALVGIIAGTIFIIKG
VRKANTVERRGPL
>gi|57164|emb|CAA68540.1| unnamed protein product [Rattus norvegicus]
MATIGDLVIRFFFMAVLMSPQKSWAIKEEHTIIQAEFYLSPDQNGEFMFDFDGDEIFHVDIKKSETIWRLEEFAKFASFE
AQGALANIAVDKANLDIMIKRSNNTPDANVIPEVTVLPKSPVNLGEPNILICFIDKFSPPAVNVTWLRNGQPVTKGVSET
VFLPREDHLFRKFHYLTFLPSVEDYYDCEVDHWGLEEPLRKHWEFEEKTLLPETKENVLCVLGLFVGLVGIVVGIVLIIK
GLRKRNAVEGRQGAL
>gi|21586016|gb|AAM55501.1| MHC class II antigen [Sus scrofa]
MVPGRVLMWGALALTAVMSACGGEDIAADHVASYGLNVYQSYGPRGYYTHEFDGDEQFYVDLEKKETVWRLPLFSEFTSF
DPQGALRNIATLKHNLNIVTKCSNNTAAVNKVPEVTVFSKSPVILGQPNTLICHVDSIFPPVINITWLKNGHSVKGFSET
SFLSKNDHSFLKISYLTFLPSDDDFYDCKVEHWGLDKPLLKHWEPEIPAPMSELTETVVCALGLIVGLVGIVVGTVFIIQ
GLRSGGPSRHQGSL
>gi|444519467|gb|ELV12865.1| HLA class II histocompatibility antigen, DQ alpha 2 chain [Tupaia chinensis]
MMSSCGGEDIVADHVGSYGINVYQSHGPSGQYTHEFDGDEQFYVDLQKKETVLWLPEFSKIGRFDPQGALRNIATLKYNL
DIMIKRSNSTAAPNKIPEATVFSKSPVKLGQPNTLICFVDNIFPPVINITWLSNGRSVTEGVSETRFLSKSDHSFSKIGY
LTFLPSADDVYDCKVEHWGLDEPLLKHWEPEIPAPVSELTETTVCALGLSIGLVGIVVGTVFIIQGLRSGSTSRQQGPL
>gi|197365567|gb|ACH70278.1| MHC class II antigen [Macaca mulatta]
MILNKALLLGALTLTTVMSPCGGEDIVADHVASYGVNMYQSYGPSGQFTHEFDGDEEFYVDLERKQTVWQLPLFSKFRRF
DPQGALRNIAVLQHNLNIVIKRSNSTAATNEVPEVTVFSKSPVMLGQPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSE
TSFLSKSDHSFFKISYLTFLPSADEIYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVFII
RGLRSIGASRHQGPL
>gi|790946|dbj|BAA07172.1| BoLA-DR-alpha [Bos taurus]
LIGLQESWAIKENHVIIQAEFYLKPEESAEFMFDFDGDEIFHVDMGKKETVWRLPEFGHFASFEAQGALANMAVMKANLD
IMIKRSNNTPNTNVPPEVTLLPNKPVELGEPNTLICFIDKFSPPVISVTWLRNGKPVTDGVSQTVFLPRNDHLFRKFHYL
PFLPTTEDVYDCKVEHLGLNEPLLKHWEYEAPAPLPETTENAVCALGLIVALVGIIAGTIFIIKGVRKANTVERRGPL
>gi|220681922|gb|ACL80119.1| MHC class II antigen [Macaca mulatta] >gi|571026318|emb|CDK12865.1| MHC class II protein [Macaca nemestrina] >gi|629265926|dbj|BAO74082.1| major histocompatibility complex class II antigen DQA [Macaca fascicularis] >gi|671708693|gb|AII81863.1| MHC class II antigen [Macaca nemestrina]
MILNKALLLGALALTTVMSPCGGEDIVADHVASYGVNLYQSYGPSGQYTHEFDGDEEFYVDLERKETVWQLPLFSKFRSF
DPQGALRNLAVGKHNLNILIKRSNSTAATNEVPEVTVFSKSPVTLGHPNTLICLVDNIFPPVVNITWLSNGRSVTEGVSE
TSFLSKSDHSFFKISYLTFLPSADEIYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVLII
RGLRSVGASRHQGPL
>gi|667335435|ref|XP_008592913.1| PREDICTED: mamu class II histocompatibility antigen, DR alpha chain [Galeopterus variegatus]
MDKSGVLVLGFFIMAVLMSPKESWAIKEEHVIIQAEFYMAPDESGEFMFDFDGDEIFHVDLEKRETIWRLEEFGKFASFE
AQGALANKAVNKFNLDIMMKRSNHTPITNVSPEVTVLSKSHVELGEPNVLICFVDKFTPPVIKVTWLQNGKPVTTGVSET
VFLPRDDQLFRKFYYLPFLPSTEDVYDCKVEHFGLDKPLLKHWEFEVQPPLPETTENVVCALGLVVGLVGIIVGTIFIIK
GVRKGNAAERRGPL
>gi|634844116|ref|XP_007937577.1| PREDICTED: LOW QUALITY PROTEIN: HLA class II histocompatibility antigen, DR alpha chain-like [Orycteropus afer afer]
MKPMALSGVPLLGLFIMAVLMSSQESGAIKEDHVIIQAEFYXDPDQSGEFMFDFDGDKIFHVNMEKKXTVWRLEEFGHFA
SFEAQGALANIVVDKANLDIMMKRSNYTPIVNESPEVTLLVNSPAEVGQPNVLICFVDKFTPPVLNVTWLKNGKPVTTGV
SETVFLPREDHLFRKFYYLPFLPSTDDFYDCQVDHSGLDKPLLKHWELEMPTPLPETTETLVCILGLVVGLVGITVGTIL
IIKGTRKGNAVEHRGPL
>gi|641737840|ref|XP_008159605.1| PREDICTED: SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like [Eptesicus fuscus]
MTINRALIWGALALTTVLSGCGGEDIVADHVGAYGINVYHSYGSSGQYTHEFDGDEEFYVDLGKKETVWQLPMFSEFTSF
DPQLALRNMAIAKHNLDNLIKRSNSTAAPIKVPEVTVFPKSPVELGQPNTLICAVDNIFPPVINISWLSNGHSVTQGVSE
TSFLSKKDHSFLKISYLTFLPSADDVYDCRVEHWGLDQPLLKHWEPEIPAPMSELTETVVCALGLAVGLVGIVTGTVFII
QGLRPAGASRQQGPL
>gi|470618855|ref|XP_004317963.1| PREDICTED: SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like isoform 1 [Tursiops truncatus]
MVLNRALILGTLTLTIMMSPCGGEDIVADHVASYGTTIYQSFGPSGQYTQEFDGDELFYVDLEKKETVWRLPVFSEFAGF
DPQGALRNIAVVKHNLDILIKRSNFTPVTNEVPEVTVFSKFPVLLRQPNTLICLVDNIYPPVINITWLRNGHTVREGVSE
ISFLTKNDLSFLKISYLTFLPSDDDVYDCKVEHWGLDEPLLKHWEPEIPTPMSELTETVVCALGLTVGLVGIVVGTVFII
QGLRSGGPSRHQGPL
>gi|625262954|ref|XP_007622909.1| PREDICTED: H-2 class II histocompatibility antigen, E-U alpha chain isoform X2 [Cricetulus griseus]
MATTGALVLRLFFMAVLLSPQKSWAIKEEHTIIQAEFFLSPDEKGEFMFDFDGDEIFHVDIRKSETIWRLEEFGQFASFE
AQGALANIAVDKANLDIMIKRSNHTPDVNVSPEVTVLPNSPVSLGEPNILICFIDKFSPPVVNVTWLRNGQPVTTGVSET
VFLPREDHLFRKFYYLTFLPTTEDVYDCVVDHWGLEEPLLKHWEFEEHTPLPETKENLVCALGLFVGIVGIIAGVVFIIK
GMQKRNAAERRQGAL
>gi|629510166|dbj|BAO74186.1| major histocompatibility complex class II DQ alpha chain [Macaca fascicularis]
MILNKALLLGALALTTVMSPCGGEDIVADHVASYGVNLYQSYGPSGQYTHEFDGDEEFYVDLERKETVWQLPLFSKFRSF
DPQGALRNLAVSKHNLNIMIKRSNSTAATNEVPEVTVFSKSPVTLGHPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSE
TSFLSKSDHSFFKISYLTFLPSADEIYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVLII
RGLRSVGASRHQGPL
>gi|297661219|ref|XP_002809164.1| PREDICTED: HLA class II histocompatibility antigen, DQ alpha 1 chain-like [Pongo abelii]
MILNKALMLGALALATVMSPCGGEDIVADHVASYGVNLYQSYGPSGQYTHEFDGDEQFYVDLGRKETVWCLPVLRQFRFD
PQFALTNIAVLKHNLNNLIKRSNSTAATNEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGHTVTEGVSET
SFLSKSDHSFFKISYLTFLPSADEIYDCKVEHWGLDQPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVLIIR
GLRSVGASRHQGPL
>gi|558214792|ref|XP_006108432.1| PREDICTED: SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like [Myotis lucifugus]
MTRNRVLIWGALALTTVLSCCGGEDIVADHVGAYGINVYQSYGPSGQYTHEFDGDEEFYVDLDKKETVCWLLGFSEFKYF
DIQTALINMAIFKYNLDLLIKRSNYTAAPNKVPAVTVFPKAPVELGQPNTLICAVDNIFPPVINISWLSNGHSVTQGVSE
TSFLSKSDDSFLKFSYLTFLPSADDVYDCKVEHWGLDQPLLKHWEPEIPVPMSELMETVVCALGLAVGLVGIITGAIFII
QGLRPGGISRQQGPL
>gi|573008347|emb|CDL68747.1| MHC class II DQA, partial [Ovis aries]
RALILGALALTTMMSPSGGEDIVADHFGSYGIHVYQSHGPSGQYTHEFDGDELFYVDLGKKETVWRLPMFSQFAGFDPQR
AVIQLATSKHNLDYMTKHSNFTHAINEVPEVTVFSKSPVMLGQPNTLICHVDNIFPPVINITWLKNGHAVMEGVSETSFL
SKDDHSFLKIGYLTFLPSDDDIYDCKVEHWGLEEPLLKHWEPEIPAPMSELTETVVCALGLTMGLVGIVVGTIFIIQGLR
SGGASRHQGPL
>gi|558196431|ref|XP_006104492.1| PREDICTED: HLA class II histocompatibility antigen, DQ alpha 2 chain-like [Myotis lucifugus]
MTLNRALIWGALALTTVLSRCGGEDIVADHIIACGISVSQSYGPSGQYTFEFDGDEIFYVDPKKKKTVWRLPGLSEFGGF
DPQSGLRNMAVVNHTLDILIKSSNSTAAPNKVPEVTVFPKAPVELGQPNTLICAVDNIFPPVINISWLNNGHSVTQGVSE
TSFLSKKDHSFLKISYLTFLPSADDIYDCKVEHWGLDQPLLKHWEPEIPAPMSELTETVVCALGLAVGLVGIVTGTVFII
QGLRPAGASRHQGPL
>gi|259027648|gb|ACV91085.1| MHC class II antigen [Macaca mulatta] >gi|339333321|emb|CBX60116.1| MHC class II antigen [Macaca fascicularis]
MILNKALLLGALALTTVMSPCGGEDIVADHVASYGVNMYQSYGPSGQYTHEFDGDEEFYVDLERKQTVWQLPLFSKFRRF
DPQGALRNIAVLQHNLNIVIKRSNSTAATNEVPEVTVFSKSPVMLGQPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSE
TSFLSKSDHSFFKISYLTFLPSADEIYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVFII
RGLRSIGASRHQGPL
>gi|488548176|ref|XP_004465580.1| PREDICTED: HLA class II histocompatibility antigen, DR alpha chain-like isoform 3 [Dasypus novemcinctus]
MAQRGVGVLGVFLAAVLMSAQETRAIKEEHVIIQAEFYQTPNPSGEFMFDFDGDEIFHVDLDKKETVWRLEEFGRFSSFE
AQGALANIAVDKANLEIMMKRSNYTPDTSVPPEVTVLLNRPVELGQPNILICFVDKFSPPVINVTWLQNGKPVTTGVSET
VFLPRDDHLFRKFHYLPFLPSTEDVYDCKVEHWGLDEPLLKHWEFEGPTPLPETTENVVCALGLVVGLVGIVVGTTLIIK
GMRKGNAAERRGPL
>gi|77539966|gb|ABA86857.1| MHC class II antigen [Homo sapiens]
MILNKALMLGALALTTVMSPCGGEDIVADHVASYGVNLYQSYGPSGQYTHEFDGDEQFYVDLGRKETVWCLPVLRQFRXF
DPQFALTNIAVLKHNLNSLIKRSNSTAATNEVPEVTVFSKSPVTLGQPNILICLVDNIFPPVVNITWLSNGHSVTEGVSE
TSFLSKSDHSFFKISYLTLLPSSEESYDCKVEHWGLDKPLLKHWEPEIPAPMSELTETVVCALGLSVGLVCIVVGTVFII
RGLRSVGASRHQGPL
>gi|307252|gb|AAA59760.1| HLA DQ-alpha [Homo sapiens]
MILNKALMLGSLALTTVMSPCGGEDIVADHVASYGVNLYQSYGPSGQYTHEFDGDEQFYVDLGRKETVWCLPVLRQFRFD
PQFALTNIAVHKHNLNSLIKRSNSTAATNEVPEVTVFSKSPVTLGQPNILICLVDNIFPPVVNITWLSNGHSVTEGVSET
SFLSKSDHSFFKISYLTLLPSAEESYDCKVEHWGLDKPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVFIIR
GLRSVGASRHQGPL
>gi|602733220|ref|XP_007451997.1| PREDICTED: SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like isoform X1 [Lipotes vexillifer] >gi|602733222|ref|XP_007451998.1| PREDICTED: SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like isoform X2 [Lipotes vexillifer]
MVPNRALILGTLTLTIMMSPCGGEDIVADHVASHGTTIYQSFGPSGQYTHEFDGDELFYVDLEKKETVWQLPVFSEFASF
DPQGALRNIAVGKHNLDILIKCSNFTPVTNEVPEVTVFSKFPVLLRQPNTLICLVDNIYPPVINITWLRNGHSVREGVSE
ISFLPKNDLSFFKISYLTFLPSDDDVYDCKVEHWGLDEPLLKHWEPEIPTPMSELTETVVCALGLIVGLVGIVVGTVFII
QGLRSGGPSRHQGPL
>gi|52840185|gb|AAU87984.1| MHC class II antigen [Homo sapiens]
MILNKALMLGTLALTTVMSPCGGEDIVADHVASYGVNLYQSYGPSGQYTHEFDGDEQFYVDLGRKETVWCLPVLRQFRFD
PQFALTNIAVLKHNLNSLIKRSNSTAATNEVPEVTVFSKSPVTLGQPNILICLVDNIFPPVVNITWLSNGHSVTEGVSET
SFLSKSDHSFFKISYLTLLPSAEESYDCKVEHWGLDKPLLKHWEPEIPAPMSELTGTVVCALGLSVGLVGIVVGTVFIIR
GLRSVGASRHQGPL
>gi|31982789|ref|NP_034511.2| histocompatibility 2, class II antigen E alpha precursor [Mus musculus] >gi|606925|gb|AAC52482.1| major histocompatibility complex H-2E alpha chain precursor [Mus musculus domesticus]
MATIGALLLRFFFIAVLMSSQKSWAIKEEHTIIQAEFYLLPDKRGEFMFDFDGDEIFHVDIEKSETIWRLEEFAKFASFE
AQGALANIAVDKANLDVMKERSNNTPDANVAPEVTVLSRSPVNLGEPNILICFIDKFSPPVVNVTWFRNGRPVTEGVSET
VFLPRDDHLFRKFHYLTFLPSTDDFYDCEVDHWGLEEPLRKHWEFEEKTLLPETTENVVCALGLFVGLVGIVVGIILIMK
GIKKRNVVERRQGAL
>gi|496629046|gb|AGL45570.1| MHC class II antigen, partial [Macaca fascicularis]
MILNKALLLGALALTTVMSPCGGEDIVADHVASYGVNMYQSYGPSGQYTHEFDGDEEFYVDLERKQTVWQLPLFSKFRRF
DPQGALRNIAVLQHNLNIVIKRSNSTAATNEVPEVTVFSKSPVMLGQPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSE
TSFLSKSDHSFFKISYLTFLPSADEIYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVFII
RGLRSIGASRHQG
>gi|122187|sp|P04224.1|HA22_MOUSE RecName: Full=H-2 class II histocompatibility antigen, E-K alpha chain; Flags: Precursor [Mus musculus] >gi|5578835|emb|CAA24216.2| immune response protein [Mus musculus] >gi|77415516|gb|AAI06108.1| Histocompatibility 2, class II antigen E alpha [Mus musculus] >gi|148678323|gb|EDL10270.1| histocompatibility 2, class II antigen E alpha, isoform CRA_a [Mus musculus] >gi|148678324|gb|EDL10271.1| histocompatibility 2, class II antigen E alpha, isoform CRA_a [Mus musculus] >gi|224341|prf||1102204B antigen IE alpha
MATIGALVLRFFFIAVLMSSQKSWAIKEEHTIIQAEFYLLPDKRGEFMFDFDGDEIFHVDIEKSETIWRLEEFAKFASFE
AQGALANIAVDKANLDVMKERSNNTPDANVAPEVTVLSRSPVNLGEPNILICFIDKFSPPVVNVTWLRNGRPVTEGVSET
VFLPRDDHLFRKFHYLTFLPSTDDFYDCEVDHWGLEEPLRKHWEFEEKTLLPETKENVVCALGLFVGLVGIVVGIILIMK
GIKKRNVVERRQGAL
>gi|38373609|gb|AAR19089.1| H-2 class II histocompatibility antigen, A-D alpha chain precursor [Mus musculus]
MPCSRALILGVLALNTMLSLCGGEDVIEADHVGFYGTTVYQSPGDIGQYTHEFDGDELFYVDLDKKKTVWRLPEFGQLIL
FEPQGGLQNIAAEKHNLGILTKRSNFTPATNEAPQATVFPKSPVLLGQPHTLICFVDNIFPPVINITWLRNSKSVTDGVY
ETSFLVNRDHSFHKLSYLTFIPSDDDIYDCKVEHWGLEEPVLKHWEPEIPAPMSGLTETVVCALGLSVGLVGIVVGTIFI
IQGLRSGGTSRHPGPL
>gi|426250461|ref|XP_004018955.1| PREDICTED: SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like [Ovis aries]
MILNRALILGALALTTMMSPSGSEDIVADHIAAYGINVYHSYGPSGYYTHEFDGDEEFYVDLEKRETVWHLPVFSQFRSF
DPQGALRNMASGKQTLEIMIQRSNSTAATNKVPEVTVFSKSPMMLGQPNTLICHVDNIFPPVINITWLRNGHSVIEGVSE
TSFLSKDDHSFSKISYLTFLPSDDDVYDCKVEHWGLDKPLELHTEPEIPAPMSELTETVVCALGLTVGLVGIVVGTIFII
RGLRSGGPSRHQGPL
>gi|641737842|ref|XP_008159606.1| PREDICTED: SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like [Eptesicus fuscus]
MILNRALIWGALALSTVLSCCGGDDSVANHVAAYGINVYHSYSSSGQYTHEFDGDEEFYVDLGKKETVWQLPMFSKFRNF
DPQGALRNMAIAKHNLDLLIKRSNSTATPIKVPEVTVFPKSPVELGQPNTLICAVDNIFPPVINISWLSNGHSVTQGVSE
TSFLSKKDHSFLKISYLTFLPSADDVYDCRVEHWGLDQPLLKHWEPEIPAPMSELTETVVCALGLAVGLVGIVTGTVFII
QGLRPAGASRQQGPL
>gi|220981788|emb|CAX17686.1| MHC class II antigen [Ovis aries]
MAITRVPILGLFITVLISLQESWAIKEDHMIIQAGIYVNPEQSAEFMFDFDGDEIFHVDMQKKETVWRLPEFGHFASFEA
QGALANMAVMKANLDVMTKYSNNTPNTNVPPEVTLLPNKPVELGEPNTLICFIDKFSPPVISVTWLRNGKPVTDGVSQTV
FLPRDDHLFRKFHYLSFLPTTEDVYDCKVEHCSLNEPLLKHWEYEAPAPLPETTENAVCALGLIVALVGIIAGTIFIIKG
VRKANTVEGRGPL
>gi|332246121|ref|XP_003272198.1| PREDICTED: HLA class II histocompatibility antigen, DQ alpha 2 chain-like [Nomascus leucogenys]
MILNKALMLGALALTTVMSPCGGEDIVADHVASYGVNFYQSYGPSGQYTHEFDGDEEFYVDLETKETVWQLPMFSKFISF
DPQSALRNMAVGKHTLEFMVKQSNSTAATNEVPEVTVFSKFPVTLGQPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSE
TSFLSKSDHSFFKISYLTFLPSADEIYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSAGLVGIVVGTVFII
QGLRSVGASRHQGLL
>gi|225851|prf||1401194A MHC RT1.Balpha
MPLSRALILGVLALTTMLSPCGGQDDIEADHVGSYGITVYQYHESKGQYTHEFDGDERFYVDLDKKETIWRIPEFGQLIS
FDPQGALRNIAIIKHNLEILMKRSNSTPAVNGEVPEATVFSKSPVLLGQPNTLICFVDNIFPPVINITWLRNSKPLTEGV
YETSFLINSDYSFHKMAYLTFIPSNDDIYDCKVEHWSLDEPVLRHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTIF
IIQGLRSVAPSRHPGPL
>gi|571026320|emb|CDK12866.1| MHC class II protein [Macaca nemestrina] >gi|649570520|emb|CDP90144.1| MHC class II antigen [Macaca mulatta] >gi|671708695|gb|AII81864.1| MHC class II antigen [Macaca nemestrina]
MILNKALLLGALALTTVMSPCGGEDIVADHVASYGVNLYQSYGPSGQYTHEFDGDEEFYVDLERKETVWQLPLFSKFRSF
DPQGALRNLAVGKHNLNILIKHSNSTAATNEVPEVTVFSKSPVTLGHPNTLICLVDNIFPPVVNITWLSNGRSVTEGVSE
TSFLSKSDHSFFKISYLTFLPSADEIYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSMGLVGIVVGTVLII
RGLRSVGASRHQGPL
>gi|2266961|emb|CAA74343.1| MHC class II alpha product [Bos indicus]
VLNRALILGALTLTTMTSLCGGEDIVADHIGTYGTDFYQSHGPSGQYIHQFDGDEEFYVDLEKEEAVWRLPMFDKLRRFH
PQGALRNIAVAKHNLDVLTKRYNFTPVINEVPEVTVFSKSPVMLSQPNTLICHVDNIFPPVINITWLRNGHSVTEHVSET
SFLLRSDYSYLKISYLPFHPSDDDVYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLTVGLVGIVVGTVLITR
GLRSSGASRHQGPL
>gi|466085899|ref|XP_004285666.1| PREDICTED: SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like isoform 1 [Orcinus orca] >gi|466085903|ref|XP_004285667.1| PREDICTED: SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like isoform 2 [Orcinus orca] >gi|466085906|ref|XP_004285668.1| PREDICTED: SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like isoform 3 [Orcinus orca]
MVPNRALILGTLTLTIMMSPCGGEDIVADHVASYGTTIYQSFGPSGQYTQEFDGDELFYVDLEKKETVWRLPVFSEFAGF
DPQGALRNIAVAKHNLDIIIKRSNFTPVTNEVPEVTVFSKFPVLLHQPNTLICLVDNIYPPVINITWLRNGHTVREGVSE
ISFLTKNDLSFFKISYLTFLPSDDDVYDCKVEHWGLDEPLLKHWEPEIPTPMSELTETVVCALGLTVGLVGIVVGTVFII
QGLRSGGPSRHQGPL
>gi|444517050|gb|ELV11358.1| Mamu class II histocompatibility antigen, DR alpha chain, partial [Tupaia chinensis]
FFIPLSQFSPTPFPAFSEEHVIIQAEFYLSPDQRGEFMFDFDGDEIFHVDMDKKETVWRLKEFGQFAGFEAQGALANIAV
DKANLEIMMKRSNNTPDTNVAPEVTVLTDKPVELGEPNILICFIDKFSPPVIDVTWLKNGKPVTMGRSETIFLPREDHLF
RKFHYLPFVPSTEDFYDCKVEHWGFDKPVLTHWEFEMQTPLPETTENVVCALGLVVGLVGIIVGTVLIIKGVRKGNATER
RGPL
>gi|629510164|dbj|BAO74185.1| major histocompatibility complex class II DQ alpha chain [Macaca fascicularis]
MILNKALLLGALALTTVMSPCGGEDIVADHVASYGVNLYQSYGPSGQYTHEFDGDEEFYVDLERKETVWQLPLFSKFRSF
DPQGALRNLAVGKHNLNILIKHSNSTAATNEVPEVTVFSKSPVTLGHPNTLICLVDNIFPPVVNITWLSNGRSVTEGVSE
TSFLSKSDHSFFKISYLTFLPSADEIYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVLII
RGLRSVGASRHQGPL
>gi|163391|gb|AAA30649.1| MHC BoLA-DQA-alpha chain (AA at 358), partial [Bos taurus]
DHIGTYGISIYHTYGPSGYYTHEFDGDEEFYVDLEKRETVWRLPVFSKFATFDPQGALRNIATSKHDLEVLIQRSNSTAA
TNKVPEVTVFSKSPVMLGQPNTLICHVDNIFPPVINITWLRNGHSVTEGVSETSFLIKSDYSFLKINYLTFLPSDDDVYD
CKVEHWGLDEPLLKHWEPDIPAPMSELTETVVCALGLTVGLVGIMVGTILIIQGLRSGGPSRHQGPL
>gi|114606718|ref|XP_527352.2| PREDICTED: HLA class II histocompatibility antigen, DQ alpha 1 chain isoform 2 [Pan troglodytes] >gi|410040577|ref|XP_003950844.1| PREDICTED: HLA class II histocompatibility antigen, DQ alpha 1 chain [Pan troglodytes]
MILNKALLLGALALTTVMSPCGGEDIVADHVASYGVNLYQSYGPSGQYTHEFDGDEEFYVDLERKETVWQLPLFRSFRGF
DPQGALTNIAITKHNLNILIKRSNSTAATNEVPEVTVFSKSPVTLDQPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSE
TSFLSKSDHSFFKISYLTFLPSADEIYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETVVCTLGLSVGLVGIVVGTVLII
RGLRSVGASRHQGPL
>gi|507685835|ref|XP_004711786.1| PREDICTED: mamu class II histocompatibility antigen, DR alpha chain-like [Echinops telfairi]
MASTGTPALGLFVVAVLMSFQKSWAIKEDHVIIQAEFYQSPDQSGEFMFDFDGDEIFHVDMGKKETVWRLKEFERFASFE
AQGALANIAVDKANLDIMKKRSNNTPIVNVPPEVTVLLHDVVEAEQPNVLICFVDKFTPPVLKVTWLKNGAPVTTGVSET
VFLPRDDHLFRKFFYLPFLPSAEDYYDCQVEHWGLDTPILKHWEFEAPTPFPETTENVVCILGLVVGLVGIIVGSLLIIK
GVRKGNAVERPRGPL
>gi|126566022|gb|ABO20840.1| MHC class II antigen [Macaca mulatta]
MMILNKALLLGALALTTVMSPCGGEDIVADHVASYGVNLYQSYGPSGQYTHEFDGDEEFYVDLERKETVWQLPLFSKFRS
FDPQGALRNLAVSKHNLNILIKHSNSTAATNEVPEVTVFSKSPVTLGHPNTLICLVDNIFPPVVNITWLSNGRSVTEGVS
ETSFLSKSDHSFFKISYLTFLPSADEIYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETVVCTLGLSMGLVGIVVGTVLI
IRGLRSVGASRHQGPL
>gi|390196928|gb|AFL70559.1| MHC class II protein, partial [Macaca fascicularis]
GGEDIVADHVASYGVNLYQSYGPSGQYTHEFDGDEEFYVDLERKETVWQLPLFSKFRSFDPQGALRNLAVGKHNLNILIK
RSNSTAATNEVPEVTVFSKSPVTLGHPNTLICLVDNIFPPVVNITWLSNGRSVTEGVSETSFLSKSDHSFFKISYLTFLP
SADEIYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSMGLVGIVVGTVLIIRGLRSVGASR
>gi|528924176|ref|XP_005196654.1| PREDICTED: SLA class II histocompatibility antigen, DQ haplotype D alpha chain [Bos taurus] >gi|529003397|ref|XP_005223624.1| PREDICTED: SLA class II histocompatibility antigen, DQ haplotype D alpha chain [Bos taurus]
MVLNRALILGAFALTTMMSPCGGEDIVADHVGSYGTEIYQSHGPSGQYTQEFDGDELFYVDLGKKETVWRLPMFSQFAGF
DPQAALSEIATAKHNLDVLTKRSNFTPVINEVPEVTVFSKSPMVLGQPNTLICHMDNFPPVINITWLKNGHAVTEGVSET
SFLPKDDHSFLKIGYLTFLPSDDDVYDCKVEHWSLDEPLLKHWEPEVPAPMSELTETVVCALRLTVGLVGIVVGTIFIIQ
GLRSGGASRHQGPL
>gi|125742969|gb|ABN54687.1| MHC class II antigen [Macaca mulatta]
MILNKALLLGALALTTVMSPCGGEDIVADHVASYGVNVYQSYGPSGQYTHEFDGDEEFYVDLERKQTVWQLPLFSKFRRF
DPQRALRNIAVLQHNLNIVIKRSNSTAATNEVPEVTVFSKSPVMLGQPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSE
TSFLSKSDHSFFKISYLTFLPSADEIYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVFII
RGLRSIGASRHQGPL
>gi|1015974|gb|AAC52535.1| MHC class II protein alpha-chain PeleAa, partial [Peromyscus leucopus]
DHVGAYGLNFYQSYGPKGQYTHEFDGDELFYVDLDKKETIWRIPEFGQLTSFDPQGGLQDIATAKQGLDILIKRSNFTPA
TNEVPEVTVFPKYPVMLGQPNILICFVDNIFPPVVNITWLRNSKSVTEGVYETSFLSNSDHSFHKMAYLTFIPSDDDVYD
CKVEHWGLEEPMLKHWEPEVPAPMSELTETVVCALGLSVGIVGIMVGTIFIIQGLRSGGPSRHPGPL
>gi|555995162|ref|XP_005909325.1| PREDICTED: SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like [Bos mutus] >gi|440893809|gb|ELR46455.1| hypothetical protein M91_05096 [Bos mutus]
MVLNRALILGALTLTTMTSLCGGEDIVADHIGTYGTDFYQSHGPSGQYIHQFDGDEEFYVDLEKEEAVWRLPMFDKLRRF
HPQGALRNIAIAKHNLDVLTKLYNFTPVINEVPEVTVFSKSPVMLSQPNTLICHVDNIFPPVINITWLRNGHSVTEHVSE
TSFLLRSDYSYLKISYLPFRPSDDDVYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLTMGLVGIVVGTVLIT
RGLRSSGASRHQGPL
>gi|485955867|sp|P14439.2|HA23_MOUSE RecName: Full=H-2 class II histocompatibility antigen, E-U alpha chain; Flags: Precursor
MATIGALLLRFFFIAVLMSSQKSWAIKEEHTIIQAEFYLLPDKRGEYMFDFDGDEIFHVDIEKSETIWRLEEFAKFASFE
AQGALANIAVDKANLDVMKKRSNNTPDANVAPEVTVLSRSPVNLGEPNILVCFIDKFSPPVVNVTWLRNGQPVTEGVSET
VFLPRDDHLFRKFHYLTFLPSTDDFYDCEVDHWGLEEPLRKHWEFEEKTLLPETKENVVCALGLFVGLVGIVVGIILIMK
GIKKRNVVERRQGAL
>gi|190014509|emb|CAQ15945.2| MHC class II DQ alpha chain [Macaca fascicularis] >gi|359802781|emb|CCE60903.1| MHC class II antigen [Macaca fascicularis] >gi|523704001|emb|CDF66299.1| MHC class II antigen [Macaca fascicularis]
MILNKALLLGALALTTVMSPCGGEDIVADHVASYGVNLYQSYGPSGQYTHEFDGDEEFYVDLERKETVWQLPLFSKFRSF
DPQGALRNLAVSKHNLNILIKHSNSTAATNEVPEVTVFSKSPVTLGHPNTLICLVDNIFPPVVNITWLSNGRSVTEGVSE
TSFLSKSDHSFFKISYLTFLPSADEIYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETVVCTLGLSMGLVGIVVGTVLII
RGLRSVGASRHQGPL
>gi|589982650|ref|XP_006997454.1| PREDICTED: h-2 class II histocompatibility antigen, E-K alpha chain-like [Peromyscus maniculatus bairdii]
MATTGAMVLRLFFMVVLMGPQKSWAIKEEHTIIQAEFFLSPDQNGEFMFDFDGDEIFHVDTKNSETIWRLKEFGQFASFE
AQGALANIAVDRANLDIMIKRSNHTPDVNVAPEVTVLPNSPVSLGEPNILICFVDKFSPPVVNVTWLRNGKPVITGVSET
VFLPREDHLFRKFHYLTFLPSTTDVYDCRVEHWGLEEPLLKHWEFEEQTPLPETKENLVCALGLFVGLVGIIAGVVFIIK
GMQRRNAAERRQGAL
>gi|125488996|gb|ABN42659.1| MHC class II antigen DQ alpha chain [Macaca fascicularis]
MILNKALMLGALALTTVMSPCGGEDIVADHVASCGVNLYQSYGPSGQYTHEFDGDEQFYVDLGRKETAWRWPELSKFGGF
DPQGALRNLATVKYNLNIMTKRYNSTAATNEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGRSVTEGVSE
TSFLSKSDHSFIKISYLTFLPSADEIYDCRVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVFII
QGLRSVGASRHQGPL
>gi|586459474|ref|XP_006860398.1| PREDICTED: HLA class II histocompatibility antigen, DR alpha chain-like [Chrysochloris asiatica]
MSLHGVPILGFFIIAILMESSAIKEDHVIIQAEFYQIPEQEGEYMFDFDGDEIFHVDMKKKETVWRLKEFGQFASFEAQG
ALANIAVDKANLDIMIKRSNHTPIENEPPEVTVLLRNAVEDGEPNILICFVDKFTPPVLNVQWLKNGKPVTTGVSETVFL
PRNDHLFRKFYYLPFLPSTEDYYDCQVDHLGLDKPVLKHWEYEMNSPLPETTENLICILGLIVGLVGIVVGTIFIIKGVR
KGNAVERRGPL
>gi|479336298|gb|AGJ74725.1| MHC class II antigen, partial [Macaca mulatta]
GEDIVADHVASYGVNLYQSYGPSGQFTHEFDGDEEFYVDLERKETVWQLPLFSKFRSFDPQGALRNLAVGKHNLNILIKR
SNSTAATNEVPEVTVFSKSPVTLGHPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSETSFLSKSDHSFFKISYLTFLPS
ADEIYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSMGLVGIVVGTVLIIRGLRSVGAS
>gi|387459|gb|AAA39613.1| IA-alpha polyprotein, partial [Mus musculus]
EDDIEADHVGSYGITVYQSPGDIGQYTFEFDGDELFYVDLDKKETVWMLPEFAQLRRFEPQGGLQNIATGKHNLEILTKR
SNSTPATNEAPQATVFPKSPVLLGQPNTLICFVDNIFPPVINITWLRNSKSVTDGVYETSFFVNRDYSFHKLSYLTFIPS
DDDIYDCKVEHWGLEEPVLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTIFIIQGLRSGGTSRHPGPL
>gi|504157993|ref|XP_004590505.1| PREDICTED: SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like [Ochotona princeps]
MEPGGCGGPAGLGNQGGWMPAGPDDSGSWCPQRAQVLVAPGDQGEQMPASPNHRRSSQPQRLRVSLRVGLRVSLRLSASA
LKGDSAADHVASYGVNVYQTYGSSGQYTHEFDGDEEFYVDLNKKETVWSLPVFSHFTSFDPQGALRNIATGTYNLDILIK
RSNSTAAINEIPEVTVFPKSPVRLGQPNTLICFVDNIFPPVINISWLINGHSVTEGVSETSFLSKSDHAFSKMGYLTFLP
TADDIYDCKVEHWGLEKPLLKHWEPKIPVPMSELTETVVCALGLAIGLGGIIVGTIFIIQGLRTGGTSRQQGPL
>gi|512021678|ref|XP_004828061.1| PREDICTED: SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like isoform X2 [Mustela putorius furo]
MEKRMNRVLILGTLTLTTMMGPSGGEDIVADHVASYGINVYQSYGPSGQFTHEFDGDEEFYVDLEKKETVWRLPVFSTFG
SFDPQGALRNLAIAKQNLNILIKLYNYTAATNEVPEMALFPKSPVSLGQPNTLICLVDNIFPPVINVTWLKNRHSVTEGV
SETSFLAKKDHSFLKFSYLTFLPSADDIYDCKVEHWGLDEPLVKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVF
IIQGLRSSGASRHQGPL
>gi|629510160|dbj|BAO74183.1| major histocompatibility complex class II DQ alpha chain [Macaca fascicularis]
MILNKALMLGALALTTVMSPCGGEDIVADHVASCGVNVYQSYGPSGQYTHEFDGDEQFYVDLGRKETAWRWPELSKFGGF
DPQGALRNLATAKYNLNIMTKRYNSTAATNEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGRSVTEGVSE
TSFLSKSDHSFFKISYLTFLPSADEIYDCRVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSAGLVGIVVGTVFII
QGLRSVGASRHQGPL
>gi|584450082|emb|CDM15111.1| MHC class II protein [Macaca nemestrina]
MILNKALLLGALALTTVMSPCGGEDIMADHVASYGVNLYQTYGLSGQYTHEFDGDEQFYVDLERKETVWRLPLFSKFGGF
DPQGALRNLAVSKHNLNIMIKRSNSTAATNEVPEVTVFSKSPVTLGHPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSE
TSFLSKSDHSFFKISYLTFLPSADEIYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVLII
RGLRSVGASRHQGPL
>gi|390196944|gb|AFL70567.1| MHC class II protein, partial [Macaca fascicularis]
GGEDIVADHVASYGVNMYQSYGPSGQYTHEFDGDEEFYVDLERKETVWQLPLFSKFRSFDPQGALRNLAVGKHNLNILIK
RSNSTVATNEVPEVTVFSKSPVTLGHPNTLICLVDNIFPPVVNITWLSNGRSVTEGVSETSFLSKSDHSFFKISYLTFLP
SADEIYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSMGLVGIVVGTVLIIRGLRSVGASR
>gi|479336278|gb|AGJ74715.1| MHC class II antigen, partial [Macaca mulatta]
GEDIVADHVASYGVNLYQSYGPSGQYTHEFDGDEEFYVDLERKETVWQLPLFSKFRSFDPQGALRNLAVGKHNLNILIKR
SNSTAATNEVPEVTVFSKSPVTLGHPNTLICLVDNIFPPVVNITWLSNGRSVTEGVSETSFLSKSDHSFFKISYLTFLPS
ADEIYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSMGLVGIVVGTVLIIRGLRSVGAS
>gi|343094721|emb|CCC54328.1| MHC class II antigen [Macaca fascicularis]
MILNKALLLGALALTTVMSPCGGEDIVADHVASYGVNLYQSYGPSGQYTHEFDGDEEFYVDLERKETVWQLPLFSKFRSF
DPQGALRNLAVGKHNLNILIKHSNSTAATNEVPEVTVFSKSPVTLGHPSTLICLVDNIFPPVVNITWLSNGRSVTEGVSE
TSFLSKSDHSFFKISYLTFLPSADEIYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSMGLVGIVVGTVLII
RGLRSVGASRHQGPL
>gi|54649000|emb|CAH61723.1| MHC class II antigen DR alpha [Canis lupus familiaris]
MTISGVPVLGFFIMAFLMGPQESWAVKEEHVIIQAEFYLTPDPSGEFMFDFDGDEIFHVDMEKKETVWRLEEFGRFASFE
AQGALANIAVDKANLDTMIKRSNHTPNTNEVTVLSNTPVELGEPNILICFIDKFSPPVINVTWLRNGNPVTTGVSETIFL
PREDHLFRKFHYLPFLPSAEDVYDCKVEHWGLDEPLLKHWEFEPPTPLPETTENVVCALGLIVGLVGIITGTIFIIKGMR
KVKAGERRGPL
>gi|122185|sp|P01904.2|HA21_MOUSE RecName: Full=H-2 class II histocompatibility antigen, E-D alpha chain; Short=H2-IE-alpha; Flags: Precursor >gi|387465|gb|AAA98624.1| alpha-antigen [Mus musculus domesticus]
MATIGALVLRFFFIAVLMSSQKSWAIKEEHTIIQAEFYLLPDKRGEFMFDFDGDEIFHVDIEKSETIWRLEEFAKFASFE
AQGALANIAVDKANLDVMKERSNNTPDANVAPEVTVLSRSPVNLGEPNILICFIDKFSPPVVNVTWLRNGRPVTEGVSET
VFLPRDDHLFRKFHYLTFLPSTDDFYDCEVDHWGLEEPLRKTWEFEEKTLLPETKENVMCALGLFVGLVGIVVGIILIMK
GIKKRNVVERRQGAL
>gi|127461840|gb|ABO28458.1| MHC class II antigen DQ alpha chain [Macaca fascicularis] >gi|339333315|emb|CBX60113.1| MHC class II antigen [Macaca fascicularis] >gi|629510168|dbj|BAO74187.1| major histocompatibility complex class II DQ alpha chain [Macaca fascicularis]
MILNKALMLGALALTTVISPCGGEDIVADHVASCGVNVYQSYGPSGQYTHEFDGDEQFYVDLGRKETAWRWPELSKFGGF
DPQGALRNLATAKYNLNIMTKRYNSTAATNEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGRSVTEGVSE
TSFLSKSDHSFFKISYLTFLPSADEIYDCRVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSAGLVGIVVGTVFII
QGLRSVGASRHQGPL
>gi|426258419|ref|XP_004022809.1| PREDICTED: SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like, partial [Ovis aries]
SEDIVADHIAAYGINVYHSYGPSGYYTHEFDGDEEFYVDLEKRETVWHLPVFSQFRSFDPQGALRNMASGKQTLEIMIQR
SNSTAATNKVPEVTVFSKSPMMLGQPNTLICHVDNIFPPVINITWLRNGHSVIEGVSETSFLSKDDHSFSKISYLTFLPS
DDDVYDCKVEHWGLDKPLLKHWEPEIPAPMSELTETVVCALGLTVGLVGIVVGTVLIIRGLRSGGPSRHQGPL
>gi|479336272|gb|AGJ74712.1| MHC class II antigen, partial [Macaca mulatta] >gi|479336284|gb|AGJ74718.1| MHC class II antigen, partial [Macaca mulatta]
GEDIVADHVASYGVNMYQSYGPSGQYTHEFDGDEEFYVDLERKETVWQLPLFSKFRSFDPQGALRNLAVGKHNLNILIKR
SNSTAATNEVPEVTVFSKSPVTLGHPNTLICLVDNIFPPVVNITWLSNGRSVTEGVSETSFLSKSDHSFFKISYLTFLPS
ADEIYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSMGLVGIVVGTVLIIRGLRSVGAS
>gi|593771039|ref|XP_007123886.1| PREDICTED: SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like isoform X1 [Physeter catodon] >gi|593771041|ref|XP_007123887.1| PREDICTED: SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like isoform X2 [Physeter catodon]
MVLNRALILGALTLTITMSPCGGEDIAADHVASHGTTIYQSYGPSGQYTHEFDGDELFYVDLEKKETVWRLPVFSEFASF
DPQGALRNIAAGKHTLDILIKRSNFTPVTNEVPEVTVFSKFPVSLHQPNTLLCLVDNIYPPVINITWLRNGHLVREGVSE
ISFLPKNDLSFLKISYLTFLPSDDDVYDCKVEHWGLEKPLLKHWEPEIPTPMSELTETVVCALGLTVGLVGIMVGSVFTI
QGLRSGGPSRHQGPL
>gi|339333319|emb|CBX60115.1| MHC class II antigen, partial [Macaca fascicularis]
ALLLGALTLTTVMSPCGGEDIVADHVASYGVNVYQSYGPSGQFTHEFDGDEQFYVDLGRKETVWRLPIPYRYGFDPQFAL
RNIAVLTHNLNILIKRSNSTAATNEVPEVTVFSKSPVMLGQPNTLICLVDNIFPPVVNITWLSNGHSVIEGVSETSFLSK
SDHSFFKISYLTFLPSADEIYDCRVEHWGLDEPLLKHWEPEIPVPMSELTETVVCALGLSAGLVGIVVGTVLIIRGLRSV
GASRHQGPL
>gi|479336286|gb|AGJ74719.1| MHC class II antigen, partial [Macaca mulatta]
GEDIVADHVASYGVNVYQSYGPSGQFTHEFDGDEEFYVDLERKETVWQLPLFSKFRSFDPQGALRNLAVGKHNLNILIKR
SNSTAATSEVPEVTVFSKSPVTLGHPNTLICLVDNIFPPVVNITWLSNGRSVTEGVSETSFLSKSDHSFFKISYLTFLPS
ADEIYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSMGLVGIVVGTVLIIRGLRSVGAS
>gi|163359|gb|AAA30642.1| MHC lymphocyte antigen, partial [Bos taurus]
VADHIGRYGINVYHTYGPSGYYTHEFDGDEEFYVDLEKRETVWNLPLFSKFRRFDPQGALRNIATVKHNLEIVIQRSNST
AATNKVPEVTVFSKSPMMLGQPNTLICHVDNIFPPVINITWLKNGHLVIEGISETSFLSKDDHSFSKISYLTFLPSDDDV
YDCKVEHWGLDKPLLKHWEPDIPAPMSELTETVVCALGLTVGLVGIVVGTVLIIRGLRSGGPSRDQGPL
>gi|281342296|gb|EFB17880.1| hypothetical protein PANDA_018206 [Ailuropoda melanoleuca]
ADHVASDGINVYQSYGPSGQFTHEFDGDEEFYVDLEKKETVWRLPMFSTFASFDPQGALRNLAIVKQNLNIMINRSNYTA
ATNEVPDVTVFPKSPVMLGQPNTLICLVDNIFPPVINVTWLKNRHSVTEGVSETSFLAKKDHSFLKISYLTFLPSADDIY
DCKVEHWGLEEPLLKHWEPEIATPMSELTETVVCALGLAVGLVGIVVGTVFIIQGLRSGGTPGHQGPL
>gi|671708681|gb|AII81857.1| MHC class II antigen [Macaca nemestrina]
MILNKALLLGALALTTVMSPCGGEDIMADHVASYGVNVYQSYGPSGQYSHEFDGDEQFYVDLGRKETVWRLPIPYRYGFD
PQFALRNIAVLTHNLNILIKRSNSTAATNEVPEVTVFSKSPVMLGQPNTLICLVDNIFPPVVNITWLSNGHSVIEGVSET
SFLSKSDHSFFKISYLTFLPSADEIYDCRVEHWGLDEPLLKHWEPEIPVPMSELTETVVCALGLSAGLVGIVVGTVLIIR
GLRSVGASRHQGPL
>gi|187264183|emb|CAQ15946.1| MHC class II DQ alpha chain [Macaca fascicularis]
MILNKALLLGALTLTTVMSPCGGEDIVADHVASYGVNLYQTYGLSGQFTHEFDGDEQFYVDLERKETVWRLPLFSKFGGF
DPQGALRNLAVGKHNLNILIKHSNSTAATNEVPEVTVFSKSPVTLGHPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSE
TSFLSKSDHSFFKISYLTFLPSADEIYDCRVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSMGLVGIVVGTVLII
RGLRSVGASRHQGPL
>gi|479336304|gb|AGJ74728.1| MHC class II antigen, partial [Macaca mulatta]
GEDIVADHIASYGVNMYQSYGPSGQYTHEFDGDEEFYVDLERKETVWQLPLFSKFRSFDPQGALRNLAVGKHNLNILIKR
SNSTAATNEVPEVTVFSKSPVTLGHPNTLICLVDNIFPPVVNITWLSNGRSVTEGVSETSFLSKSDHSFFKISYLTFLPS
ADEIYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSMGLVGIVVGTVLIIRGLRSVGAS
>gi|548960621|ref|NP_001271763.1| HLA class II histocompatibility antigen, DQ alpha 2 chain-like precursor [Macaca fascicularis] >gi|125742967|gb|ABN54686.1| MHC class II antigen [Macaca mulatta] >gi|338176995|gb|AEI83896.1| MHC class II antigen [Macaca fascicularis] >gi|671708665|gb|AII81849.1| MHC class II antigen [Macaca nemestrina] >gi|671708669|gb|AII81851.1| MHC class II antigen [Macaca nemestrina]
MILNKALMLGALALTTMMSPCGGEDIVADHVASCGVNLYQTYGLSGQFTHEFDGDEQFYVDLRRKETAWRWPELSKFGGF
DPQGALRNLAVLKHNLNIVTKRYNSTAATNEVPEVTVFSKSPVTLGHPNTLICLVDNIFPPVVNITWLSNGRSVTEGVSE
TSFLSKSDHSFFKISYLTFLPSADEIYDCRVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVFII
QGLRSVGASRHQGPL
>gi|122207|sp|P14436.1|HA2R_MOUSE RecName: Full=H-2 class II histocompatibility antigen, A-R alpha chain [Mus musculus] >gi|387461|gb|AAA39621.1| IA-alpha polyprotein, partial [Mus musculus]
EDDIEADHVGVYGTTVYQSPGDIGQFTHEFDGDEWFYVDLDKKETVWMLPEFGQLTSFDPQGGLQNIAVVKHNLEILTKR
SNFTPAANEAPQATVFPKSPVLLGQPNTLICFVDNIFPPVINITWLRNSKSVTDGVYETSFLVNRDHSFHKLSYLTFIPS
DDDIYDCKVEHWGLEEPVLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTIFIIQGLRSGGTSRHPGPL
>gi|585172302|ref|XP_006738104.1| PREDICTED: SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like [Leptonychotes weddellii]
MTLNRVLILGTLTLTTMMSPSSGEDIVADHVGSYGINVYQSYGPSGQYTHEFDGDEEFYVDLEKKETVWQLPMFQTYGRF
DPQGALTNLAILKHNLNIMIERSNSTAATNEVPEVTVFLKSPAMLGQPNTLICFVDNIFPPVINVTWLKNRHSVTEGVSE
TSFLAKRDHSFLKISYLTFLPSADDIYDCKVEHWGLDEPLLKHWEPEIPTPMSELTETVVCAVGLTVGLVGIVVGTVFII
QGLHSGGASRHQGPL
>gi|339333313|emb|CBX60112.1| MHC class II antigen [Macaca fascicularis] >gi|571026314|emb|CDK12863.1| MHC class II protein [Macaca nemestrina] >gi|671708673|gb|AII81853.1| MHC class II antigen [Macaca nemestrina]
MILNKALLLGALTLTTVMSPCGGEDIVADHVASYGVNVYQSYGPSGQYSHEFDGDEQFYVDLGRKETVWRLPIPYRYGFD
PQFALRNIAVLTHNLNILIKRSNSTAATNEVPEVTVFSKSPVMLGQPNTLICLVDNIFPPVVNITWLSNGHSVIEGVSET
SFLSKSDHSFFKISYLTFLPSADEIYDCRVEHWGLDEPLLKHWEPEIPVPMSELTETVVCALGLSAGLVGIVVGTVLIIR
GLRSVGASRHQGPL
>gi|337272858|gb|AEI70189.1| MHC class II antigen [Macaca fascicularis] >gi|629265918|dbj|BAO74078.1| major histocompatibility complex class II antigen DQA [Macaca fascicularis]
MILNKALMLGALALTTVMSPCGGEDIVADHVASCGVNLYQSYGPSGQFTHEFDGDEQFYVDLGRKETAWRWPELSKFGGF
DPQGALRNLAAAKHNLNILTKRYNFTAATNEVPEVTVFSKSPVTLGQPNNLICLVDNIFPPVVNITWLSNGHSVTEGVSE
TSFLSKSDHSFFKISYLTFLPSADEIYDCRVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVFII
QGLRSVGASRHQGPL
>gi|343094719|emb|CCC54327.1| MHC class II antigen [Macaca fascicularis] >gi|523703999|emb|CDF66298.1| MHC class II antigen [Macaca fascicularis] >gi|671708659|gb|AII81846.1| MHC class II antigen [Macaca nemestrina]
MILNKALMLGALALTTMMSPCGGEDIVADHVASCGVNLYQTYGLSGQYTHEFDGDEQFYVDLERKETAWRWPELSKFGGF
DPQGALRNLAVSKHNLNIMTKRYNSTAATNEVPEVTVFSKSPVTLGHPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSE
TSFLSKSDHSFFKISYLTFLPSADEIYDCRVEHWGLDEPLLKHWEPEIPVPMSELTETVVCALGLSVGLVGIVVGTVFII
QGLRSVGASRHQGPL
>gi|338176987|gb|AEI83892.1| MHC class II antigen [Macaca fascicularis] >gi|571026316|emb|CDK12864.1| MHC class II protein [Macaca nemestrina] >gi|671708687|gb|AII81860.1| MHC class II antigen [Macaca nemestrina]
MILNKALLLGALALTTVMSPCGGEDIVADHVASYGVNVYQSYGPSGQYSHEFDGDEQFYVDLGRKETVWRLPIPYRYGFD
PQFALRNIAVLTHNLNILIKRSNSTAATNEVPEVTVFSKSPVMLGQPNTLICLVDNIFPPVVNITWLSNGHSVIEGVSET
SFLSKSDHSFFKMSYLTFLPSADEIYDCRVEHWGLDEPLLKHWEPEIPVPMSELTETVVCALGLSAGLVGIVVGTVLIIR
GLRSVGASRHQGPL
>gi|396940296|emb|CCJ47271.1| MHC class II antigen [Homo sapiens]
MILNKALLLGALALTTVMSPCGGEDIVADHVASYGVNLYQSYGPSGQFTHEFDGDEQFYVDLGRKETVWCLPVLRQFRFD
PQFALTNIAVTKHNLNILIKRSNSTAATNEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSET
SFLSKSDHSFFKISYLTFLPSADEIYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVFIIR
GLRSVGASRHQGPL
>gi|338176997|gb|AEI83897.1| MHC class II antigen [Macaca fascicularis] >gi|339333311|emb|CBX60111.1| MHC class II antigen [Macaca fascicularis] >gi|584450078|emb|CDM15109.1| MHC class II protein [Macaca nemestrina] >gi|671708685|gb|AII81859.1| MHC class II antigen [Macaca nemestrina]
MILNKALLLGALALTTVMSPCGGEDIVADHVASYGVNVYQSYGPSGQYSHEFDGDEQFYVDLGRKETVWRLPIPYRYGFD
PQFALRNIAVLTHNLNILIKRSNSTAATNEVPEVTVFSKSPVMLGQPNTLICLVDNIFPPVVNITWLSNGHSVIEGVSET
SFLSKSDHSFFKISYLTFLPSADEIYDCRVEHWGLDEPLLKHWEPEIPVPMSELTETVVCALGLSAGLVGIVVGTVLIIR
GLRSVGASRHQGPL
>gi|338176993|gb|AEI83895.1| MHC class II antigen [Macaca fascicularis] >gi|339333305|emb|CBX60108.1| MHC class II antigen [Macaca fascicularis] >gi|571026322|emb|CDK12867.1| MHC class II protein [Macaca nemestrina] >gi|671708703|gb|AII81868.1| MHC class II antigen [Macaca nemestrina]
MILNKALLLGALALTTVMSPCGGEDIVADHIASYGVNLYQTYGLSGQFTHEFDGDEQFYVDLERKETVWRLPLFSKFGGF
DPQGALRNLAVGKHNLNILIKHSNSTAATNEVPEVTVFSKSPVTLGHPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSE
TSFLSKSDHSFFKISYLTFLPSADEIYDCRVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSMGLVGIVVGTVLII
RGLRSVGASRHQGPL
>gi|629510158|dbj|BAO74182.1| major histocompatibility complex class II DQ alpha chain [Macaca fascicularis]
MILNKALMLGALALTTVMSPCGGEDIVADHVASCGVNVYQSYGPSGQYTHEFDGDEQFYVDLGRKETAWRWPELSKFGGF
DPQGALRNLATAKYNLNIMTKRYNSTAATNEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSSGRSVTEGVSE
TSFLSKSDHSFIKISYLTFLPSADEIYDCRVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVFII
QGLRSVGASRHQGPL
>gi|187264179|emb|CAQ15944.1| MHC class II DQ alpha chain [Macaca fascicularis] >gi|629265924|dbj|BAO74081.1| major histocompatibility complex class II antigen DQA [Macaca fascicularis]
MILNKALLLGALALTTVMSPCGGEDIMADHVASYGVNLYQTYGLSGQYTHEFDGDEQFYVDLERKETVWRLPLFSKFGGF
DPQGALRNLAVGKHNLNILIKHSNSTAATNEVPEVTVFSKSPVTLGHPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSE
TSFLSKSDHSFFKISYLTFLPSADEIYDCRVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSMGLVGIVVGTVLII
RGLRSVGASRHQGPL
>gi|390196964|gb|AFL70577.1| MHC class II protein, partial [Macaca fascicularis] >gi|390196972|gb|AFL70581.1| MHC class II protein, partial [Macaca fascicularis]
GGEDIVADHVASYGVNLYQSYGPSGQYTHEFDGDEEFYVDLERKETVWQLPLFSKFRSFDPQGALRNLAVSKHNLNILIK
HSNSTAATNEVPEVTVFSKSPVTLGHPNTLICLVDNIFPPVVNITWLSNGRSVTEGVSETSFLSKSDHSFFKISYLTFLP
SADEIYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSMGLVGIVVGTVLIIRGLRSVGASR
>gi|671708675|gb|AII81854.1| MHC class II antigen [Macaca nemestrina]
MILNKALLLGALALTTVMSPCGGEDIMADHVASYGVNLYQSYGPSGQYSHEFDGDEQFYVDLGRKETVWRLPIPYRYGFD
PQFALRNIAVLTHNLNILIKRSNSTAATNEVPEVTVFSKSPVMLGQPNTLICLVDNIFPPVVNITWLSNGHSVIEGVSET
SFLSKSDHSFFKISYLTFLPSADEIYDCRVEHWGLDEPLLKHWEPEIPVPMSELTETVVCALGLSAGLVGIVVGTVLIIR
GLRSVGASRHQGPL
>gi|125742963|gb|ABN54684.1| MHC class II antigen [Macaca mulatta] >gi|337272856|gb|AEI70188.1| MHC class II antigen [Macaca fascicularis]
MILNKALMLGALALTTVMSPCGGEDIVADHVASCGVNLYQSYGPSGQYTHEFDGDEQFYVDLGRKETAWRWPELSKFGGF
DPQGALRNLATVKYNLNIMTKRYNSTAATNEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSSGRSVTEGVSE
TSFLSKSDHSFIKISYLTFLPSADEIYDCRVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVFII
QGLRSVGASRHQGPL
>gi|584450086|emb|CDM15113.1| MHC class II protein [Macaca nemestrina] >gi|671708701|gb|AII81867.1| MHC class II antigen [Macaca nemestrina]
MILNKALLLGALALTTVMSPCGGEDIMADHVASYGVNLYQTYGLSGQYTHEFDGDEQFYVDLERKETVWRLPLFSKFGGF
DPQGALRNLAVGKHNLNILIKRSNSTAATNEVPEVTVFSKSPMTLGHPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSE
TSFLSKSDHSFFKISYLTFLPSADEIYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVLII
RGLRSVGASRHQGPL
>gi|37498596|gb|AAQ91398.1| MHC class II antigen [Homo sapiens] >gi|37498598|gb|AAQ91399.1| MHC class II antigen [Homo sapiens] >gi|37498600|gb|AAQ91400.1| MHC class II antigen [Homo sapiens] >gi|37498602|gb|AAQ91401.1| MHC class II antigen [Homo sapiens] >gi|37498604|gb|AAQ91402.1| MHC class II antigen [Homo sapiens]
DHVASYGVNLYQSYGPSGQYSHEFDGDEEFYVDLERKETVWQLPLFRRFRRFDPQFALTNIAVLKHNLNIVIKRSNSTAA
TNEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSETSFLSKSDHSFFKISYLTFLPSADEIYD
CKVEHWGLDEPLLKHWEPEIPTPMSELTETVVCALGLSVGLVGIVVGTVLIIRGLRSVGASRHQGPL
>gi|584450084|emb|CDM15112.1| MHC class II protein [Macaca nemestrina]
MILNKALLLGALALTTVMSPCGGEDIVADHVASYGVNLYQTYGLSGQYTHEFDGDEQFYVDLERKETVWRLPLFSKFGGF
DPQGALRNLAVGKHNLNILIKRSNSTAATNEVPEVTVFSKSPMTLGHPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSE
TSFLSKSDHSFFKISYLTFLPSADEIYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVLII
RGLRSVGASRHQGPL
>gi|488548161|ref|XP_004465573.1| PREDICTED: HLA class II histocompatibility antigen, DQ alpha 2 chain-like [Dasypus novemcinctus]
MVLNKTLILGALVLTTMTTTCGGEDIVDESDHVASYGVNVYQSYGPSGQYTHEFDGDEEFYVDLDKKETVWRMPEFSKYG
NFDPHGGLRNIAVLKHTLDIMIKRSNTTAATNVFPEVTVFPKSPVVLGHPNLLICLVDDIFPPVVNITWLSNGHSVTEGV
SETSFLSKPDHSFLKMSYLTFLPSADDIYDCRVEHWGLKEPLLKHWEPHIPTPMSELTDTVVCSLGLAVGLMGIMVGTVL
IIHGLRPKGASRHQGAL
>gi|512021856|ref|XP_004828148.1| PREDICTED: SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like [Mustela putorius furo]
MEKRMNRVLILGTLTLTTMMGPSGGEDIVDHVASYGINVYQSYGPSGQFTHEFDGDEEFYVDLEKKETVWRLPVFSTFGS
FDPQGALRNLAIAKQNLNILIKLYNYTAATNEVPEMALFPKSPVSLGQPNTLICLVDNIFPPVINVTWLKNRHSVTEGVS
ETSFLAKKDHSFLKFSYLTFLPSADDIYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLAVGLVGIVVGTVFI
IQGLRSSGASRHQGPL
>gi|125742965|gb|ABN54685.1| MHC class II antigen [Macaca mulatta] >gi|649570522|emb|CDP90145.1| MHC class II antigen [Macaca mulatta]
MILNKALLLGALALTTVMSPCGGEDIVADHVASYGVNLYQTYGLSGQYTHEFDGDEQFYVDLERKETVWRLPLFSKFGGF
DPQGALRNLAVGKHNLNILIKHSNSTAATNEVPEVTVFSKSPVTLGHPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSE
TSFLSKSDHSFFKISYLTFLPSADEIYDCRVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSMGLVGIVVGTVLII
QGLRSVGASRHQGPL
>gi|307251|gb|AAA36267.1| MHC DQ alpha protein precursor [Homo sapiens] >gi|396940298|emb|CCJ47272.1| MHC class II antigen [Homo sapiens] >gi|401779713|emb|CCK73390.1| MHC class II antigen [Homo sapiens]
MILNKALLLGALALTTVMSPCGGEDIVADHVASYGVNLYQSYGPSGQYTHEFDGDEQFYVDLGRKETVWCLPVLRQFRFD
PQFALTNIAVTKHNLNILIKRSNSTAATNEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSET
SFLSKSDHSFFKISYLTFLPSADEIYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVFIIR
GLRSVGASRHQGPL
>gi|22023797|gb|AAM89226.1| MHC class II antigen [Zalophus californianus]
MTLNRVLILGTLTLTTVMSPSGGEDIVADHFASYGANVYQSYGPSGQYAHEFDGDEEFYVDLEKKETVWQLPVFQTFTSF
DPQGALRNLAVGKLTLNVLTKRSNSTAATNEVPEVTVFLKSPAMLGQPNTLICFVDNIFPPVINVTWLKNKHSVTEGVSE
TRFLAKRDHSFLKFSYLTFLPSADDIYDCKVEHWGLDEPLLKHWEPEIPTPMSELTETVVCALGLTVGLVGIVVGTVFII
QGLHSGGASRHQGPL
>gi|197365563|gb|ACH70276.1| MHC class II antigen [Macaca mulatta] >gi|338176991|gb|AEI83894.1| MHC class II antigen [Macaca fascicularis]
MILNKALLLGALALTTVMSPCGGEDIVADHVASYGVNLYQTYGLSGQYTHEFDGDEQFYVDLERKETVWRLPLFSKFGGF
DPQGALRNLAVSKHNLNIMIKRSNSTAATNEVPEVTVFSKSPVTLGHPNTLICLVDNIFPPVVNITWLSSGRSVTEGVSE
TSFLSKSDHSFFKISYLTFLPSADEIYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVLII
RGLRSVGASRHQGPL
>gi|390196968|gb|AFL70579.1| MHC class II protein, partial [Macaca fascicularis]
GGEDIVADHVASYGVNLYQSYGPSGQFTHEFDGDEEFYVDLERKETVWQLPLFSKFRSFDPQGALRNLAVSKHNLNILIK
HSNSTAATNEVPEVTVFSKSPVTLGHPNTLICLVDNIFPPVVNITWLSNGRSVTEGVSETSFLSKSDHSFFKISYLTFLP
SADEIYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETVVCTLGLSMGLVGIVVGTVLIIRGLRSVGASR
>gi|37498584|gb|AAQ91392.1| MHC class II antigen [Homo sapiens] >gi|37498586|gb|AAQ91393.1| MHC class II antigen [Homo sapiens] >gi|37498588|gb|AAQ91394.1| MHC class II antigen [Homo sapiens] >gi|37498590|gb|AAQ91395.1| MHC class II antigen [Homo sapiens] >gi|37498592|gb|AAQ91396.1| MHC class II antigen [Homo sapiens] >gi|37498594|gb|AAQ91397.1| MHC class II antigen [Homo sapiens]
DHVASYGVNLYQSYGPSGQFTHEFDGDEEFYVDLERKETVWKLPLFHRLRFDPQFALTNIAVLKHNLNILIKRSNSTAAT
NEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSETSFLSKSDHSFFKISYLTFLPSADEIYDC
KVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVLIIRGLRSVGASRHQGPL
>gi|479336282|gb|AGJ74717.1| MHC class II antigen, partial [Macaca mulatta]
GEDIVADHIASYGVNLYQSYGPSGQYTHEFDGDEEFYVDLERKETVWQLPLFSKFRSFDPQGALRNLAVGKHNLNILIKR
SNSTAATNEVPEVTVFSKSPVTLGHPNTLICLVDNIFPPVVNITWLSNGRSVTEGVSETSFLSKSDHSFFKISYLTFLPS
ADEIYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETAVCALGLSMGLVGIVVGTVLIIRGLRSVGAS
>gi|634721486|emb|CDO50358.1| MHC class II protein [Macaca mulatta]
MILNKALLLGALALTTVMSPCGGEDIVADHVASYGVNLYQTYGLSGQYTHEFDGDEQFYVDLERKETVWRLPLFSKFGGF
DPQGALRNLAVGKHNLNILIKHSNSTAATNEVPEVTVFSKSPVMLGHPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSE
TSFLSKSDHSFFKISYLTFLPSADEIYDCRVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSMGLVGIVVGTVLII
QGLRSVGASRHQGPL
>gi|523703997|emb|CDF66297.1| MHC class II antigen [Macaca fascicularis]
MILNKALMLGALVLTAVMSPCGGEDIVADHVASCGVNLYQTYGLSGQYTHEFDGDERFYVDLERKETAWRWPELSKFGGF
DPQGALRNLAVSKHNLNIMTKRYNSTAATNEVPEVTVFSKSPVMLGQPNTLICLVDNIFPPVVNITWLSNGRSVTEGVSE
TSFLSKSDHSFFKISYLTFLPSADEIYDCRVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVFII
QGLRSVGASRHQGPL
>gi|197209854|ref|NP_001127767.1| major histocompatibility complex, class II, DQ alpha 1 precursor [Macaca mulatta] >gi|146760592|gb|ABQ44485.1| MHC class II antigen [Macaca mulatta]
MILNKALLLGALALTTVMSPCRGEDIVADHIASYGVNLYQTYGLSGQFTHEFDGDEQFYVDLERKETVWRLPLFSKFGGF
DPQGALRNLAVGKHNLNILIKHSNSTAATNEVPEVTVFSKSPVTLGHPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSE
TSFLSKSDHSFFKISYLTFLPSADEIYDCRVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSMGLVGIVVGTVLII
RGLRSVGASRHQGPL
>gi|125489000|gb|ABN42661.1| MHC class II antigen DQ alpha chain [Macaca fascicularis] >gi|337272850|gb|AEI70185.1| MHC class II antigen [Macaca fascicularis] >gi|338176981|gb|AEI83889.1| MHC class II antigen [Macaca fascicularis] >gi|355748450|gb|EHH52933.1| hypothetical protein EGM_13473 [Macaca fascicularis] >gi|629265920|dbj|BAO74079.1| major histocompatibility complex class II antigen DQA [Macaca fascicularis]
MILNKALMLGALVLTAVMSPCGGEDIVADHVASCGVNLYQTYGLSGQFTHEFDGDEQFYVDLRRKETAWRWPELSKFGGF
DPQGALRNLAVLKHNLNIVTKRYNSTAATNEVPEVTVFSKSPVTLGHPNTLICLVDNIFPPVVNITWLSNGRSVTEGVSE
TSFLSKSDHSFFKISYLTFLPSADEIYDCRVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVFII
QGLRSVGASRHQGPL
>gi|118601748|ref|NP_001073045.1| major histocompatibility complex, class II, DQ alpha, type 3 precursor [Bos taurus] >gi|74354030|gb|AAI02346.1| Major histocompatibility complex, class II, DQ alpha, type 3 [Bos taurus] >gi|296474347|tpg|DAA16462.1| TPA: major histocompatibility complex, class II, DQ alpha, type 3 [Bos taurus]
MVLNRALILGALTLTTMTSLCGGEDIVADHVGTYGTDFYQSHGPSGQYIHQFDGDEEFYVDLEKEEAVWRLPMFDKLRFH
PQGALRNIAIAKHNLDVLTKLYNFTPVINEVPEVTVFSKSPVMLSQPNTLICHVDNIFPPVINITWLRNGHSVTEHVSET
SFLLRSDYSYLKISYLPFRPSDDDVYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLTVGLVGIVVGTVLITR
GLRSSGASRHQGPL
>gi|472396901|ref|XP_004417669.1| PREDICTED: SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like [Odobenus rosmarus divergens]
MTLNRVLILGTLTLTTMMSPSGGEDIVADHFASYGINVYQSYGSWGQYTHEFDGDEQFYVDLEKKETVWQLPVFQTFTSF
DPQGALRNLAIAKHNLNILTKRSNSTAATNEVPEVTVFLKSPAMLGQPNTLICFVDNIFPPVINVTWLKNRRSVTEGVSE
TSFLAKRDHSFLKISYLTFLPSADDIYDCKVEHWGLDEPLLKHWEPEIPTPMSELTETVVCALGLTVGLVGIVVGTVFII
QGLRSGGASRHQGPL
>gi|9502015|gb|AAF87949.1|AF201293_1 MHC class II antigen [Aotus nancymaae]
MILNKALMLGALILTTVMSPCGSEDIVADHVAAYGINLYQSYGLSGQYTHEFDGDEEFYVDLGRKETVWRLPVFSKFAGF
DPQGALTNIAAGKHNLDILIKRSNSTAATNEVPEVTVFSKSPVVLGQPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSE
TSFLSKSDHSFFKISYLTFLPSADEIYDCKVEHWGLEEPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVFII
RGLHTVGASRRQGPL
>gi|52840249|gb|AAU88031.1| MHC class II antigen [Homo sapiens] >gi|52840253|gb|AAU88034.1| MHC class II antigen [Homo sapiens]
MILNKALLLGALALTTVMSPCGGEDIVADHVASCGVNLYQFYGPSGQFTHEFDGDEQFYVDLEKKETAWRWPEFSKFGGF
DPQGALRNMAVAKHNLNIMIKRYNSTAATNEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGHAVTEGVSE
TSFLSKSDHSFFKISYLTFLPSADEIYDCKVEHWGLDQPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVFII
QGLRSVGASRHQGPL
>gi|344298888|ref|XP_003421122.1| PREDICTED: mamu class II histocompatibility antigen, DR alpha chain-like [Loxodonta africana]
MARNGVPVLGFFIIAVLMSPQESWAIKADHVIIQAEFYQNPDQTGEFMFDFDGDEIFHVNLEKKETVWRLKEFEHFASFE
AQGALANIAVDKANLDIMMKRSNNTPISNESPEVTVLLNSPAEAGEPNVLICFVDKFSPPALNVTWLKNGKPVTTGVSET
VFLPREDHLFRKFYYLPFLPSTEDYYDCQVDHWGLDKPLLQHWEFEAHTPLPETKENVVCILGLLVGLVGIIVGTIFIIK
GVRKATAVERHRPL
>gi|337272860|gb|AEI70190.1| MHC class II antigen [Macaca fascicularis]
MILNKALLLGALTLTTVMSPCGGEDIVADHVASYGVNLYQTYGLSGQYTHEFDGDEQFYVDLERKETVWRLPLFSKFGGF
DPQGALRNLAVSKHNLNIMIKRSNSTAATNEVPEVTVFSKSPVTLGHPNTLICLVDNIFPPVVNITWLSSGHSVTEGVSE
TSFLSKSDHSFFKISYLTFLPSADEIYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVLII
RGLRSVGASRHQGPL
>gi|619820|gb|AAC41956.1| MHC class II HLA-DQ-alpha chain, partial [Homo sapiens]
EDIVADHVASYGVNLYQSYGPSGQYSHEFDGDEEFYVDLERKETVWQLPLFRRFRRFDPQFALTNIAVLKHNLNIVIKRS
NSTAATNEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSETSFLSKSDHSFFKISYLTFLPSA
DEIYDCKVEHWGLDEPLLKHWEPEIPTPMSELTETVVCALGLSVGLVGIVVGTVLIIRGLRSVGASR
>gi|207722|gb|AAA42362.1| MHC class II DR-alpha [Sciurus aberti]
MARSEVMVLGFFFMAVLMNPQESWAIKEEHSIIQAEFYLSPDQSGEFMFDFDGDEIFHVDVDKKETIWRLKEFGQFASFE
AQGALANIAVDKANLDIMIKRSNHTPDSNEVTVLSSGPVELGEPNVLICFIDKFSPPVVNVRWLKNGEPVTTGVSETVFL
PRKDQLFRKFHYLLFLPSNEDFYDCEVDHLGLDRPLLKHWEFEEQTPLPETKENVVCALGLAVGLVGIVVGTIFIIKGTR
KNPTAERRGPL
>gi|2266959|emb|CAA74342.1| MHC class II alpha subunit [Bos indicus]
VLNRALILGALTLTTMTSLCGGEDIVADHVGTYGTDFYQSHGPSGQYIHQFDGDEEFYVDLEKEEAVWRLPMFDKLRFHP
QGALRNIAIAKHNLDVLTKLYNFTPVINEVPEVTVFSKSPVMLSQPNTLICHVDNIFPPVINITWLRNGHSVTEHVSETS
FLLRSDYSYLKISYLPFRPSDDDVYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLTVGLVGIVVGTVLITRG
LRSSGASRHQGPL
>gi|52840181|gb|AAU87981.1| MHC class II antigen [Homo sapiens] >gi|575882247|emb|CDL92963.1| MHC class II antigen [Homo sapiens]
MILNKALLLGALALTTMMSPCGGEGIVADHVASCGVNLYQFYGPSGQYTHEFDGDEEFYVDLERKETAWRWPEFSKFGGF
DPQGALRNMAVAKHNLNIMIKRYNSTAATNEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGQSVTEGVSE
TSFLSKSDHSFFKISYLTFLPSADEIYDCKVEHWGLDQPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVFII
QGLRSVGASRHQGPL
>gi|197365561|gb|ACH70275.1| MHC class II antigen [Macaca mulatta] >gi|339333309|emb|CBX60110.1| MHC class II antigen [Macaca fascicularis]
MILNKALMLGALVLTAVMSPCGGEDIVADHVASCGVNLYQTYGLSGQYTHEFDGDERFYVDLERKETAWRWPELSKFGGF
DPQGALRNLAVLKHTLNIVTKRYNSTAATNEVPEVTVFSKSPVMLGQPNTLICLVDNIFPPVVNITWLSNGRSVTEGVSE
TSFLSKSDHSFFKISYLTFLPSADEIYDCRVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVFII
QGLRSVGASRHQGPL
>gi|297661221|ref|XP_002809163.1| PREDICTED: HLA class II histocompatibility antigen, DQ alpha 2 chain-like [Pongo abelii]
MILNKALMLGALTLITVMSPCGGEDIVADHVASYGVNFYQSYGPSGQYTHEFDGDEEFYVDLETKETVWQLPMFSKFISF
DPQSALRNMAVGKHTLEFMIKQSNSTAATNEVPEVTVFSKFPVTLGQPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSE
TSFLSKSDHSFFKISDLTFLPSADEIYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSAGLMGIVVGTVFII
QGLRSVGASRHQGLL
>gi|390196908|gb|AFL70549.1| MHC class II protein, partial [Macaca fascicularis]
GGEDIVADHVASYGVNVYQSYGLSGQYSHEFDGDEQFYVDLGRKETVWRLPILSQFSFDPQFALRNIAVLTHNLNSLIKR
SNSTAATNEVPEVTVFSKSPVTLGHPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSETSFLSKSDHSFFKISYLTFLPS
ADEIYDCRVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSAGLVGIVVGTVLIIRGLRSVGASR
>gi|390196976|gb|AFL70583.1| MHC class II protein, partial [Macaca fascicularis]
GGEDIVADHVASYGVNLYQSYGPSGQYTHEFDGDEEFYVDLERKETVWQLPLFSKFRSFDPQGALRNLAVSKHNLNILIK
HSNSTAATNEVPEVTVFSKSPVTLGHPNTLICLVDNIFPPVVNITWLSNGRSVTEGVSETSFLSKSDHSFFKISYLTFLP
SADEIYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETVVCTLGLSMGLVGIVVGTVLIIRGLRSVGASR
>gi|163371|gb|AAA30645.1| MHC BoLA-DR-alpha chain (AA at 265), partial [Bos taurus]
NHVIIQAEFYLKPEESAEFMFDFDGDEIFHVDMGKKETVWRLPEFGHFASFEAQGALANMAVMKANLDIMIKRSNNTPNT
NVPPEVTLLPNKPVELGEPNTLICFIDKFSPPVISVTWLRNGKPVTDGVSQTVFLPRNDHLFRKFHYLPFLPTTEDVYDC
KVEHLGLNEPLLKHWEYEAPAPLPETTENAVCALGLIVALVGIIAGTIFIIKGVRKANTVERRGPL
>gi|671708691|gb|AII81862.1| MHC class II antigen [Macaca nemestrina]
MILNKALLLGALALTTVMSPCGGEDIVADHVASYGVNVYQSYGPSGQYTHEFDGDEEFYVDLERKQTVWQLPLFSKFRRF
DPQRALRNIAVLQHNLNIMIKSSNSTAATNEVPEVTVFSKSPVTLGHPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSE
TSFLSKSDHSFFKISYLTFLPSTDEIYDCRVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVFII
RGLRSIGASRHQGPL
>gi|585645274|ref|XP_006882106.1| PREDICTED: mamu class II histocompatibility antigen, DR alpha chain-like [Elephantulus edwardii]
MALSGGLVLGFFFLAVLMGPQESWAVKEDHVIIQAEFYQYPSQSGEYMFDFDGDEIFHVNMEKKETVWRLEEFSHFASFE
AQGALANIAVDKANLEIMRKRSNNTPVDNEPPEVTVLLNHPLEIGQPNVLICFIDKFSPPVLNVTWLKNTVPVTTGVSET
VFLPREDHLFRKFYYLPFLPSGDDVYDCQVDHWGLDKPIIKHWEYELPTPYPETKENMVCILGLIVGLVGIIAGTILIIK
GTRKGNAVERRGPL
>gi|671708661|gb|AII81847.1| MHC class II antigen [Macaca nemestrina]
MILNKALMLGALVLTAVMSPCGGEDIVADHVASCGVNLYQTYGLSGQYTHEFDGDERFYVDLERKETAWRWPELSKFGGF
DPQGALRNLAVSKHNLNIMTKRYNSTAATNEVPEVTVFSKSPVMLGQPNTLICLVDNIFPPVVNITWLSNGRSVTEGVSE
TSFLSKSDHSFFKISYLTFLPSADEIYDCRVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSVGLMGIVVGTVFII
QGLRSVGASRHQGPL
>gi|122199|sp|P14435.1|HA2F_MOUSE RecName: Full=H-2 class II histocompatibility antigen, A-F alpha chain [Mus musculus]
EDDIEADHVGFYGISVYQSPGDIGQYTFEFDGDEWFYVDLDKKETVWRLPEFGQLTSFDPQGGLQEIATGKHNLGILTKR
SNFTPATNEAPQATVFPKSPVLLGQPNTLICFVDNIFPPVINITWLRNSKSVTDGVYETSFLVNRDHSFHKLSYLTFIPS
DDDIYDCKVEHWGLEEPVLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTIFIIQGLRSGGTSRHPGPL
>gi|602733224|ref|XP_007451999.1| PREDICTED: SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like isoform X3 [Lipotes vexillifer]
MVPNRALILGTLTLTIMMSPCGADHVASHGTTIYQSFGPSGQYTHEFDGDELFYVDLEKKETVWQLPVFSEFASFDPQGA
LRNIAVGKHNLDILIKCSNFTPVTNEVPEVTVFSKFPVLLRQPNTLICLVDNIYPPVINITWLRNGHSVREGVSEISFLP
KNDLSFFKISYLTFLPSDDDVYDCKVEHWGLDEPLLKHWEPEIPTPMSELTETVVCALGLIVGLVGIVVGTVFIIQGLRS
GGPSRHQGPL
>gi|619818|gb|AAC41955.1| MHC class II HLA-DQ-alpha chain, partial [Homo sapiens]
EDIVADHVASYGVNLYQSYGPSGQFTHEFDGDEEFYVDLERKETVWKLPLFHRLRFDPQFALTNIAVLKHNLNILIKRSN
STAATNEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSETSFLSKSDHSFFKISYLTFLPSAD
EIYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVLIIRGLRSVGASR
>gi|289185475|gb|ADC91875.1| MHC class II antigen [Elephas maximus]
MILNEALTLGVLVLTTMMSNCGGEDIVADHVGCYGTNIYQSYGPSGQYTHEFDGDELFYVDLEKKETVWRLPMFSKFESF
DPQGGLRNIAVLKHNLDILIKRSNSTAATKEVPEVTVFPKSPVTLGQPNLLICFVDNIFPPVIKITWLSNGHIVTEGVAE
TSFLPKDDHSFSKISYLTFLPSADDVYDCKVDHWGLEKPLLKHWEPEIPTPMTELTETVVCALGLVVGLVGIVVGTILII
RGLRSGSVSRHQGTL
>gi|444733664|emb|CCQ71726.1| MHC class II antigen [Homo sapiens]
MILNKALLLGALALTTVMSPCGGEDIVADHVASYGVNLYQSYGPSGQYTHEFDGDEQFYVDLGRKETVWCLPVLRQFRFD
PQFALTNIAVTKHNLNILIKRSNSTAATNEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSEI
SFLSKSDHSFFKISYLTFLPSADEIYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVFIIR
GLRSVGASRHQGPL
>gi|22023801|gb|AAM89228.1| MHC class II antigen [Zalophus californianus]
MTLNRVLILGTLTLTTVMSPSGGEDIVADHFASYGVNVYQSYGPSGQYTHEFDGDEEFYVDLEKKETVWQLPVFQTFTSF
DPQGALRNLAVGKLTLNVLTKRSNSTAATNEVPEVTVFLKSPAMLGQPNTLICFVDNIFPPVINVTWLKNKHSVTEGVSE
TRFLAKRDHSFLKFSYLTFLPSADDIYDCKVEHWGLDEPLLKHWEPEIPTPMSELTETVVCALGLTVGLVGIVVGTVFII
QGLHSGGTSRHQGPL
>gi|893284|gb|AAA69564.1| HLA DQA*0302, partial [Homo sapiens]
EDIVADHVASYGVNLYQSYGPSGQYSHEFDGDEEFYVDLERKETFWQLPLFRRFRRFDPQFALTNIAVLKHNLNIVIKRS
NSTAATNEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSETSFLSKSDHSFFKISYLTFLPSD
DEIYDCKVEHWGLDEPLLKHWEPEIPTPMSELTETVVCALGLSVGLVGIVVGTVLIIRGLRSVGASRHQGPL
>gi|426352650|ref|XP_004043823.1| PREDICTED: HLA class II histocompatibility antigen, DQ alpha 1 chain-like isoform 1 [Gorilla gorilla gorilla] >gi|426352652|ref|XP_004043824.1| PREDICTED: HLA class II histocompatibility antigen, DQ alpha 1 chain-like isoform 2 [Gorilla gorilla gorilla]
MILNKALLLGALALTAVMSPCGGEDIVADHVASCGVNLYQSYGPSGQFTHEFDGDEQFYVDLERKETAWRWPEFSKFGGF
DPQGALRNMAVAKHNLNIMIKRYNSTAATNEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSE
TSFLSKSDHSFFKISYLTFLPSADEIYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVFII
QGLRSVGASRHQGPL
>gi|512021676|ref|XP_004828060.1| PREDICTED: SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like isoform X1 [Mustela putorius furo]
MEKRMNRVLILGTLTLTTMMGPSGGEDIVDHVASYGINVYQSYGPSGQFTHEFDGDEEFYVDLEKKETVWRLPVFSTFGS
FDPQGALRNLAIAKQNLNILIKLYNYTAATNEVPEMALFPKSPVSLGQPNTLICLVDNIFPPVINVTWLKNRHSVTEGVS
ETSFLAKKDHSFLKFSYLTFLPSADDIYDCKVEHWGLDEPLVKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVFI
IQGLRSSGASRHQGPL
>gi|22023795|gb|AAM89225.1| MHC class II antigen [Zalophus californianus] >gi|22023803|gb|AAM89229.1| MHC class II antigen [Zalophus californianus]
MTLNRVLILGTLTLTTVMSPSGGEDIVADHFASYGVNVYQSYGPSGQYTHEFDGDEEFYVDLEKKETVWQLPVFQTFTSF
DPQGALRNLAVGKLTLNVLTKRSNSTAATNEVPEVTVFLKSPAMLGQPNTLICFVDNIFPPVINVTWLKNKHSVTEGVSE
TRFLAKRDHSFLKFSYLTFLPSADDIYDCKVEHWGLDEPLLKHWEPEIPTPMSELTETVVCALGLTVGLVGIVVGTVFII
QGLHSGGASRHQGPL
>gi|122209|sp|P14438.1|HA2U_MOUSE RecName: Full=H-2 class II histocompatibility antigen, A-U alpha chain, partial [Mus musculus] >gi|387463|gb|AAA39623.1| MHC H2-IA-alpha, partial [Mus musculus]
DHVGSYGIVVYQSPGDIGQYTFEFDGDELFYVDLDKKETIWMLPEFAQLRSFDPQGGLQNIATGKHNLGVLTKRSNSTPA
TNEAPQATVFPKSPVLLGQPNTLICFVDNIFPPVINITWLRNSKSVADGVYETSFFVNRDYSFHKLSYLTFIPSDDDIYD
CKVEHWGLEEPVLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTIFIIQGLRSGGTSRHPGPL
>gi|629510156|dbj|BAO74181.1| major histocompatibility complex class II DQ alpha chain [Macaca fascicularis]
MILNKALMLGALALTTVMSPCGGEDIVADHVASCGVNFYQSYGTSGQYNHEFDGDEQFYVDLGRKETAWRWPELRKFGGF
DPQGALRNLAASKHNLNILTKRYNFTAATNEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSE
TSFLSKSDHSFFKISYLTFLPSADEIYDCRVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSAGLVGIVVGTVFII
QGLRSVGASRHQGPL
>gi|74140590|dbj|BAE42424.1| unnamed protein product [Mus musculus] >gi|74221274|dbj|BAE42123.1| unnamed protein product [Mus musculus]
MPCSRALILGVLALNTMLSLCGGEDDIEADHVGFYGTTVYQSPGDIGQYTHEFDGDELFYVDLDKKKTVWRLPEFGQLIL
FEPQGGLQNIAAEKHNLGILTKRSNFTPATNEAPQATVFPKSPVLLGQPNTLICFVDNIFPPVINITWLRNSKSVTDGVY
ETSFLVNRDHSFHKLSYLTFIPSDDDIYDCKVEHWGLEEPVLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTIFI
IQG
>gi|554548464|ref|XP_005868772.1| PREDICTED: SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like [Myotis brandtii] >gi|521027478|gb|EPQ09266.1| SLA class II histocompatibility antigen, DQ haplotype D alpha chain [Myotis brandtii]
MFLVTLFNEILSLLFYTSLLPPHSSADHVGAYGGYFSQSYGPSGQYTFEFDGDETFHVDLEKKETVWRLPGLSEFGGFDP
QGGLSEVAKARHNLDILIKCSNSTTVINEVPEVTVFPKSPVELGQPNTLICAVDNIFPPVINISWLSNGHSVTQGVSETS
FLSKSDDSFLKISYLTFLPSADDVYDCKVEHWGLDQPLLKHWEPEIPAPMSELTETVVCALGLAVGLVGIVTGTVFIIQG
LRPAGASRHQGPL
>gi|554547242|ref|XP_005868175.1| PREDICTED: SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like [Myotis brandtii] >gi|521027124|gb|EPQ08912.1| SLA class II histocompatibility antigen, DQ haplotype D alpha chain [Myotis brandtii]
MALNRALIWALVALTTVLSRCGGEDIVADHVGAYGINVYHYYGSSGQYTHEFDGDEEFYVNLDKKETIWQLPMFSEFRNF
DPQVALRNMAIANYTLGILIKSSNSTTAPNKVPEVTVFPKSPVELGQPNTLICAVDNIFPPVINISWLSNGHSVTQGVSE
TSFLSKRDHSFLKISYLTFLPSADDVYDCKVEHWGLDQPLLKHWEPEIPAPMSELTETVVCALGLAVGLVGIVMGTVFII
QGLRPAGASRHQGPL
>gi|125488998|gb|ABN42660.1| MHC class II antigen DQ alpha chain [Macaca fascicularis] >gi|337272846|gb|AEI70183.1| MHC class II antigen [Macaca fascicularis]
MILNKALMLGALVLTAVMSPCGGEDIVADHVASCGVNLYQSYGTSGQYNHEFDGDEQFYVDLGRKETAWRWPELSKFGGF
DPQGALRNLAAAKHNLNILTKRYNSTAATNEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSE
TSFLSKSDHSFFKISYLTFLPSADEIYDCRVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVFII
QGLRSVGASRHQGPL
>gi|9502017|gb|AAF87950.1|AF201294_1 MHC class II antigen [Aotus nancymaae]
MILNKALMLGALILTTVMSPCGSEDIVADHVAAYGINLYQSYGLSGQYTHEFDGDEEFYMDLERKETVWRLPVFSKFAGF
DPQGALTNIAAGKHNLDILIKRSNSTAATNEVPEVTVFSKSPVVLGQPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSE
TSFLSKSDRSFFKISYLTFLPSADEIYDCKVEHWGLEEPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVFII
RGLHTVGASRHQGPL
>gi|37498606|gb|AAQ91403.1| MHC class II antigen [Homo sapiens] >gi|37498608|gb|AAQ91404.1| MHC class II antigen [Homo sapiens] >gi|37498610|gb|AAQ91405.1| MHC class II antigen [Homo sapiens] >gi|37498612|gb|AAQ91406.1| MHC class II antigen [Homo sapiens] >gi|37498614|gb|AAQ91407.1| MHC class II antigen [Homo sapiens] >gi|37498616|gb|AAQ91408.1| MHC class II antigen [Homo sapiens] >gi|37498618|gb|AAQ91409.1| MHC class II antigen [Homo sapiens] >gi|37498620|gb|AAQ91410.1| MHC class II antigen [Homo sapiens]
DHVASYGVNLYQSYGPSGQYSHEFDGDEEFYVDLERKETVWQLPLFRRFRRFDPQFALTNIAVLKHNLNIVIKRSNSTAA
TNEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSETSFLSKSDHSFFKISYLTFLPSDDEIYD
CKVEHWGLDEPLLKHWEPEIPTPMSELTETVVCALGLSVGLVGIVVGTVLIIRGLRSVGASRHQGPL
>gi|390196918|gb|AFL70554.1| MHC class II protein, partial [Macaca fascicularis] >gi|390196952|gb|AFL70571.1| MHC class II protein, partial [Macaca fascicularis] >gi|390196956|gb|AFL70573.1| MHC class II protein, partial [Macaca fascicularis]
GGEDIVADHVASYGVNVYQSYGLSGQYSHEFDGDEQFYVDLGRKETVWRLPILSQFSFDPQFALRNIAVLTHNLNILIKR
SNSTAATNEVPEVTVFSKSPVTLGHPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSETSFLSKSDHSFFKISYLTFLPS
ADEIYDCRVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSAGLVGIVVGTVLIIRGLRSVGASR
>gi|466085910|ref|XP_004285669.1| PREDICTED: SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like isoform 4 [Orcinus orca]
MVPNRALILGTLTLTIMMSPCGADHVASYGTTIYQSFGPSGQYTQEFDGDELFYVDLEKKETVWRLPVFSEFAGFDPQGA
LRNIAVAKHNLDIIIKRSNFTPVTNEVPEVTVFSKFPVLLHQPNTLICLVDNIYPPVINITWLRNGHTVREGVSEISFLT
KNDLSFFKISYLTFLPSDDDVYDCKVEHWGLDEPLLKHWEPEIPTPMSELTETVVCALGLTVGLVGIVVGTVFIIQGLRS
GGPSRHQGPL
>gi|338176985|gb|AEI83891.1| MHC class II antigen [Macaca fascicularis]
MILNKALLLGALALTTVMSPCGGEDIVADHIASYGVNLYQTYGLSGQFTHEFDGDEQFYVDLERKETVWRLPLFSKFGGF
DPQGALRNLAVGKHNLNILIKHSNSTAATNEVPEVTVFSKSPMTLGHPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSE
TSFLSKSDHSFFKISYLTFLPSADEIYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVLII
RGLRSVGASRHQGPL
>gi|259027652|gb|ACV91087.1| MHC class II antigen [Macaca mulatta]
MILNKALMLGALVLTAVMSPCGGEDIVADHVASCGVNLYQTYGLSGQYTHEFDGDEQFYVDLERKETAWRWPELSKFGGF
DPQGALRNLAVSKHNLNIMTKRYNSTAATNEVPEVTVFSKSPVTLGHPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSE
TSFLSKSDHSFFKISYLTFLPSADEIYDCRVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVFII
QGLRSVGASRHQGPL
>gi|301785758|ref|XP_002928295.1| PREDICTED: SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like [Ailuropoda melanoleuca]
MNRALILGTLTLTTMMGRSGGEDIVADHVASDGINVYQSYGPSGQFTHEFDGDEEFYVDLEKKETVWRLPMFSTFASFDP
QGALRNLAITKQNLNILIKRSNYTAATNEVPDVTVFPKSPVMLGQPNTLICLVDNIFPPVINVTWLKNRHSVTEGVSETS
FLAKKDHSFLKISYLTFLPSADDIYDCKVEHWGLEEPLLKHWEPEIATPMSELTETVVCALGLAVGLVGIVVGTVFIIQG
LHSGGDSKH
>gi|289185463|gb|ADC91869.1| MHC class II antigen [Loxodonta africana]
MILNEALTLGVLVLTTMMSNGGGEDIVADHVGCYGTNIYQSYGPSGQYTHEFDGDELFYVDLEKKETVWRLPMFSKFESF
DPQGGLRNIAVLKHNLDILIKRSNSTAATKEVPEVTVFPKSPVTLGQPNLLICFVDNIFPPVIKITWLSNGHVVTEGVAE
TNFLPKDDHSFSKISYLTFLPSADDVYDCKVDHWGLEKPLLKHWEPEIPTPMTELTETVVCALGLVVGLVGIVVGTILII
RGLRSGSVSRHQGTL
>gi|591335302|ref|XP_007093325.1| PREDICTED: mamu class II histocompatibility antigen, DR alpha chain-like isoform X4 [Panthera tigris altaica]
MAVSRAPVLGFFIMALLMGPQESLAIKEEHVIIQAEFYMKPDSSGEFMFDFDGDEIFHVDMEKKETVWRLEEFGRFASFE
AQGALANIAVDKANLDILIKRSNNTPNTNEPPEVTVLSNSPVELGEPNILICFIDKFSPPVINVTWLRNGKPVTTGVSET
VFLPREDHLFRKFHYLPFLPSVEDVYDCKVEHWEFDAPTPLPETTENVVCALGLVVGLVGIIVGTIFIIKGMRKVNAGER
RGPL
>gi|13021909|gb|AAK11577.1| MHC class II antigen precursor [Homo sapiens] >gi|21635632|gb|AAM69677.1| MHC class II antigen [Homo sapiens] >gi|52840196|gb|AAU87992.1| MHC class II antigen [Homo sapiens] >gi|189054169|dbj|BAG36689.1| unnamed protein product [Homo sapiens]
MILNKALLLGALALTTVMSPCGGEDIVADHVASCGVNLYQFYGPSGQYTHEFDGDEEFYVDLERKETAWRWPEFSKFGGF
DPQGALRNMAVAKHNLNIMIKRYNSTAATNEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGQSVTEGVSE
TSFLSKSDHSFFKISYLTFLPSADEIYDCKVEHWGLDQPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVFII
QGLRSVGASRHQGPL
>gi|390196910|gb|AFL70550.1| MHC class II protein, partial [Macaca fascicularis] >gi|390196914|gb|AFL70552.1| MHC class II protein, partial [Macaca fascicularis] >gi|390196932|gb|AFL70561.1| MHC class II protein, partial [Macaca fascicularis]
GGEDIVADHVASYGVNLYQTYGLSGQYTHEFDGDEQFYVDLERKETVWRLPLFSKFGGFDPQGALRNLAVSKHNLNIMIK
RSNSTAATNEVPEVTVFSKSPVTLGHPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSETSFLSKSDHSFFKISYLTFLP
SADEIYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVLIIRGLRSVGASR
>gi|390196902|gb|AFL70546.1| MHC class II protein, partial [Macaca fascicularis] >gi|390196946|gb|AFL70568.1| MHC class II protein, partial [Macaca fascicularis] >gi|390196948|gb|AFL70569.1| MHC class II protein, partial [Macaca fascicularis] >gi|390196954|gb|AFL70572.1| MHC class II protein, partial [Macaca fascicularis] >gi|390196958|gb|AFL70574.1| MHC class II protein, partial [Macaca fascicularis] >gi|390196966|gb|AFL70578.1| MHC class II protein, partial [Macaca fascicularis] >gi|390196974|gb|AFL70582.1| MHC class II protein, partial [Macaca fascicularis]
GGEDIVADHIASYGVNLYQTYGLSGQFTHEFDGDEQFYVDLERKETVWRLPLFSKFGGFDPQGALRNLAVGKHNLNILIK
HSNSTAATNEVPEVTVFSKSPVTLGHPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSETSFLSKSDHSFFKISYLTFLP
SADEIYDCRVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSMGLVGIVVGTVLIIRGLRSVGASR
>gi|52840213|gb|AAU88004.1| MHC class II antigen [Homo sapiens] >gi|52840225|gb|AAU88013.1| MHC class II antigen [Homo sapiens] >gi|60495462|emb|CAC88114.2| MHC class II antigen [Homo sapiens]
MILNKALLLGALALTTMMSPCGGEGIVADHVASCGVNLYQFYGPSGQYTHEFDGDEEFYVDLERKETAWRWPEFSKFGGF
DPQGALRNMAVAKHNLNIMIKRYNSTAATNEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGQSVTEGVSE
TSFLSKSDHSFFKISYLTFLPSADEIYDCKVEHWGLDQPLLKHWEPEIPAPMSELTETVVCTLGLSVGLVGIVVGTVFII
QGLRSVGASRHQGPL
>gi|386922|gb|AAA59754.1| HLA-DQ alpha chain, partial [Homo sapiens]
SPCGADHVASYGVNLYQSYGPSGQYSHEFDGDEEFYVDLERKETVWQLPLFRRFRRFDPQFALTNIAVLKHNLNIVIKRS
NSTPATNEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSETSFLSKSDHSFFKISYLTFLPSD
DEIYDCKVEHWGLDEPLLKHWEPEIPTPMSDLTETVVCALGLSVGLVGIVVGTVLIIRGLRSVGASRHQGPL
>gi|52840206|gb|AAU87999.1| MHC class II antigen [Gorilla gorilla]
MILNKALLLGALALTTVMSPCGGEDIVADHVASCGVNLYQSYGPSGQFTHEFDGDEQFYVDLERKETAWRWPEFSKFGGF
DPQGALRNMAVAKHNLNIMIKRYNSTAATNEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSE
TSFLSKSDHSFFKISYLTFLPSADEIYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSVGLAGIVVGTVFII
QGLRSVGASRHQGPL
>gi|18426975|ref|NP_002113.2| HLA class II histocompatibility antigen, DQ alpha 1 chain precursor [Homo sapiens] >gi|52840177|gb|AAU87978.1| MHC class II antigen [Homo sapiens] >gi|52840217|gb|AAU88007.1| MHC class II antigen [Homo sapiens] >gi|52840237|gb|AAU88022.1| MHC class II antigen [Homo sapiens] >gi|52840245|gb|AAU88028.1| MHC class II antigen [Homo sapiens] >gi|77539954|gb|ABA86855.1| MHC class II antigen [Homo sapiens] >gi|83308056|emb|CAJ14960.1| human leucocyte antigen DQA1 [Homo sapiens]
MILNKALLLGALALTTVMSPCGGEDIVADHVASCGVNLYQFYGPSGQYTHEFDGDEQFYVDLERKETAWRWPEFSKFGGF
DPQGALRNMAVAKHNLNIMIKRYNSTAATNEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGQSVTEGVSE
TSFLSKSDHSFFKISYLTFLPSADEIYDCKVEHWGLDQPLLKHWEPEIPAPMSELTETVVCALGLSVGLMGIVVGTVFII
QGLRSVGASRHQGPL
>gi|479336288|gb|AGJ74720.1| MHC class II antigen, partial [Macaca mulatta]
GEDIVADHVASYGVNVYQSYGPSGQFTHEFDGDEQFYVDLGRKETVWRLPIPYRYGFDPQFALRNIAVLTHNLNILIKRS
NSTAATNEVPEVTVFSKSPVMLGQPNTLICLVDNIFPPVVNITWLSNGHSVIEGVSETSFLSKSDHSFFKISYLTFLPSA
DEIYDCRVEHWGLDEPLLKHWEPEIPVPMSELTETVVCALGLSAGLVGIVVGTVLIIRGLRSVGAS
>gi|390196920|gb|AFL70555.1| MHC class II protein, partial [Macaca fascicularis] >gi|390196924|gb|AFL70557.1| MHC class II protein, partial [Macaca fascicularis]
GGEDIVADHVASYGVNVYQSYGPSGQYSHEFDGDEQFYVDLGRKETVWRLPIPYRYGFDPQFALRNIAVLTHNLNILIKR
SNSTAATNEVPEVTVFSKSPVMLGQPNTLICLVDNIFPPVVNITWLSNGHSVIEGVSETSFLSKSDHSFFKMSYLTFLPS
ADEIYDCRVEHWGLDEPLLKHWEPEIPVPMSELTETVVCALGLSAGLVGIVVGTVLIIRGLRSVGASR
>gi|37498660|gb|AAQ91430.1| MHC class II antigen [Homo sapiens] >gi|37498662|gb|AAQ91431.1| MHC class II antigen [Homo sapiens] >gi|37498664|gb|AAQ91432.1| MHC class II antigen [Homo sapiens]
DHVASYGVNLYQSYGPSGQFTHEFDGDEQFYVDLGRKETVWCLPVLRQFRFDPQFALTNIAVTKHNLNILIKRSNSTAAT
NEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSETSFLSKSDHSFFKISYLTFLPSADEIYDC
KVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVFIIRGLRSVGASRHQGPL
>gi|619822|gb|AAC41957.1| MHC class II HLA-DQ-alpha chain, partial [Homo sapiens]
EDIVADHVASYGVNLYQSYGPSGQYSHEFDGDEEFYVDLERKETVWQLPLFRRFRRFDPQFALTNIAVLKHNLNIVIKRS
NSTAATNEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSETSFLSKSDHSFFKISYLTFLPSD
DEIYDCKVEHWGLDEPLLKHWEPEIPTPMSELTETVVCALGLSVGLVGIVVGTVLIIRGLRSVGASR
>gi|122208|sp|P14437.1|HA2S_MOUSE RecName: Full=H-2 class II histocompatibility antigen, A-S alpha chain [Mus musculus] >gi|387462|gb|AAA39622.1| IA-alpha polyprotein, partial [Mus musculus] >gi|3169658|gb|AAC17908.1| histocompatibility 2, class II antigen A, alpha [Mus musculus] >gi|3169660|gb|AAC17909.1| histocompatibility 2, class II antigen A, alpha [Mus musculus]
EDDIEADHVGVYGTTVYQSPGDIGQYTHEFDGDEWFYVDLDKKETIWMLPEFGQLTSFDPQGGLQNIATGKYTLGILTKR
SNSTPATNEAPQATVFPKSPVLLGQPNTLICFVDNIFPPVINITWLRNSKSVTDGVYETSFLVNRDHSFHKLSYLTFIPS
DDDIYDCKVEHWGLEEPVLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTIFIIQGLRSGGTSRHPGPL
>gi|281342294|gb|EFB17878.1| hypothetical protein PANDA_018204 [Ailuropoda melanoleuca]
ADHVASDGINVYQSYGPSGQFTHEFDGDEEFYVDLEKKETVWRLPMFSTFASFDPQGALRNLAITKQNLNILIKRSNYTA
ATNEVPDVTVFPKSPVMLGQPNTLICLVDNIFPPVINVTWLKNRHSVTEGVSETSFLAKKDHSFLKISYLTFLPSADDIY
DCKVEHWGLEEPLLKHWEPEIATPMSELTETVVCALGLAVGLVGIVVGTVFIIQGLHSGGDSKH
>gi|57012346|ref|NP_001008831.1| rano class II histocompatibility antigen, B alpha chain precursor [Rattus norvegicus] >gi|46237566|emb|CAE83946.1| RT1 class II, B alpha [Rattus norvegicus] >gi|54780920|gb|AAV40626.1| MHC class II antigen [Rattus norvegicus] >gi|55778523|gb|AAH86448.1| RT1 class II, locus Ba [Rattus norvegicus] >gi|149043350|gb|EDL96801.1| rCG60724, isoform CRA_a [Rattus norvegicus] >gi|542130298|gb|AGV39042.1| RT1-Ba [Rattus norvegicus]
MPLSRALILGVLALTTMLSPCGGQDDIEADHVAAYGINMYQYYESRGQYTHEFDGDEEFYVDLDKKETIWRIPEFGQLTS
FDPQGGLQEIATAKYNLEILMKSNSTPATNKVPEATVFSKSPVLLGQPNTLICFVDNIFPPAINITWLRNSKPVTEGTFE
TSFLSNPDHSFHKMAYLTFIPSNDDIYDCKVEHWGLDEPVLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTIFII
QGLRSGGPSRHPGPL
>gi|558199726|ref|XP_006105212.1| PREDICTED: HLA class II histocompatibility antigen, DR alpha chain-like [Myotis lucifugus]
MAIIRGPVLGFFITVVLVCLQESWAIKEDHVIIQAEFYMKPDESGEFMFDFDGDEIFHVDMQKKETVWRLKEFGQFASFE
AQGALANIAVDKANLETMIKRSNNTPNSNVPPELTVFPNNPVELGEPNILICFIDKFSPPVVNVTWFRNGKPVTTGVSET
VFLPRQDHLFRKFYYLPFLPSNEDFYDCQVEHWGLDEPLIKHWEFEAPTPLPETTENVVCGLGLVVGLVGIIVGTVLIIK
GMRKGHAAERRGPL
>gi|390196938|gb|AFL70564.1| MHC class II protein, partial [Macaca fascicularis]
GGEDIVADHVASYGVNLYQTYGLSGQYTHEFDGDEQFYVDLERKETVWRLPLFSKFGGFDPQGALRNLAVSKHNLNIMIK
RSNSTAATNEVPEVTVFSKSPVTLGHPNTLICLVDNIFPPVVNITWLSSGRSVTEGVSETSFLSKSDHSFFKISYLTFLP
SADEIYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVLIIRGLRSVGASR
>gi|479336290|gb|AGJ74721.1| MHC class II antigen, partial [Macaca mulatta]
GEDIVADHIASYGVNLYQTYGLSGQFTHEFDGDEQFYVDLERKETVWRLPLFSKFGGFDPQGALRNLAVGKHNLNILIKH
SNSTAATNEVPEVTVFSKSPVTLGHPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSETSFLSKSDHSFFKISYLTFLPS
ADEIYDCRVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSMGLVGIVVGTVLIIRGLRSVGAS
>gi|537249678|gb|ERE88235.1| h-2 class II histocompatibility antigen, I-E alpha chain-like protein, partial [Cricetulus griseus]
DHVGLYGLNLYQSHQPNGQYTMEFDDDELFYVDLDKKETIWRIPEFAQLRSFDPQGGLQEIAVAKYNLDILIKETNSTPA
ANEVPEVTVFPKSPVLLGQPNVLICLVNNIFPPVINITWLRNSKSVTEGVYETSFLSNSDHSFHKMAYLTFIPSDDDIYD
CRVEHWGLEEPALKHWEPEVPAPVSELPETVVCALGLSVGIVGIVVGTVFIIQGLRSGGPSRHPGPL
>gi|310789299|gb|ADP24751.1| MHC class II antigen [Macaca mulatta]
MILNKALLLGALALTTVMSPCGGEDIVADHVASYGVNLYQTYGLSGQYTHEFDGDEQFYVDLERKETVWRLPLFSKFGGF
DPQGALRNLAVGKHNLNILIKHSNSTAATNEVPEVTVFSKSPVTLGHPNTLICLVDNIFPHVVNITWLSNGHSVTEGVSE
TSFLSKSDHSFFKISYLTFLPSADEIYDCRVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSMGLVGIVVGTVLII
QGLRSVGASRHQGPL
>gi|479336300|gb|AGJ74726.1| MHC class II antigen, partial [Macaca mulatta]
GEDIVADHIASYGVNLYQTYGLSGQFTHEFDGDEQFYVDLERKETVWRLPLFSKFGGFDPQGALRNLAVGKHNLNILIKH
SNSTAATNEVPEVTVFSKSPVTLGHPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSETSFLSKSDHSFFKISYLTFLPS
ADEIYDCRVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSMGLVGIVVGTVLIIQGLRSVGAS
>gi|22023799|gb|AAM89227.1| MHC class II antigen [Zalophus californianus]
MTLNRVLILGTLTLTTVMCPSGGEDIVADHFASYGVNVYQSYGPSGQYTHEFDGDEEFYVDLEKKETVWQLPVFQTFTSF
DPQGALRNLAVGKLTLNVLTKRSNSTAATNEVPEVTVFLKSPAMLGQPNTLICFVDNIFPPVINVTWLKNKHSVTEGVSE
TRFLAKRDHSFLKFSYLTFLPSADDIYDCKVEHWGLDEPLLKHWEPEIPTPMSELTETVVCALGLTVGLVGIVVGTVFII
QGLHSGGASRHQGPL
>gi|197099716|ref|NP_001126202.1| major histocompatibility complex, class II, DQ alpha 1 precursor [Pongo abelii] >gi|55730688|emb|CAH92065.1| hypothetical protein [Pongo abelii]
MILNKALMLAALALTTVMSPCGGEDIVADHIASYGVNSYQSYGPSGQYTHEFDGDEEFYVDLERKETVWQLPLFRKFRRF
DPQHALTNIAVLKHNLNIVIKRSNSTAATNEVPEVTVFTKSPMTLGQPNTLICLVDNIFPPVVNITWLSNGHSVTEGVYE
TSFLSKSDHSFFKISYLTFLPSADEIYDCKVEHWGLDKPLLKHWEPEIPEPMSELTETVVCSLGLSVGLMGIVVGTVLII
RGLRSVDASRDRGPL
>gi|386924|gb|AAA59758.1| MHC HLA-DQ-alpha chain precursor old gene name 'HLA-DQA', partial [Homo sapiens]
GEDIVADHVASCGVNLYQFYGPSGQYTHEFDGDEQFYVDLERKETAWRWPEFSKFGGFDPQGALRNMAVAKHNLNIMIKR
YNSTAATNEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGQSVTEGVSETSFLSKSDHSFFKISYLTFLPS
ADEIYDCKVEHWGLDQPLLKHWEPEIPAPMSELTETVVCALGLSVGLMGIVVGTVFIIQGLRSVGASRHQGPL
>gi|37498622|gb|AAQ91411.1| MHC class II antigen [Homo sapiens] >gi|37498624|gb|AAQ91412.1| MHC class II antigen [Homo sapiens] >gi|37498626|gb|AAQ91413.1| MHC class II antigen [Homo sapiens] >gi|37498628|gb|AAQ91414.1| MHC class II antigen [Homo sapiens] >gi|37498630|gb|AAQ91415.1| MHC class II antigen [Homo sapiens]
DHVASYGVNLYQSYGPSGQYTHEFDGDEQFYVDLGRKETVWCLPVLRQFRFDPQFALTNIAVTKHNLNILIKRSNSTAAT
NEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSETSFLSKSDHSFFKISYLTFLPSADEIYDC
KVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVFIIRGLRSVGASRHQGPL
>gi|37498580|gb|AAQ91390.1| MHC class II antigen [Homo sapiens] >gi|37498582|gb|AAQ91391.1| MHC class II antigen [Homo sapiens] >gi|37498672|gb|AAQ91434.1| MHC class II antigen [Homo sapiens] >gi|37498676|gb|AAQ91435.1| MHC class II antigen [Homo sapiens] >gi|37498680|gb|AAQ91436.1| MHC class II antigen [Homo sapiens] >gi|37529979|gb|AAQ92909.1| MHC class II antigen [Homo sapiens]
DHVASCGVNLYQFYGPSGQFTHEFDGDEQFYVDLEKKETAWRWPEFSKFGGFDPQGALRNMAVAKHNLNIMIKRYNSTAA
TNEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGHAVTEGVSETSFLSKSDHSFFKISYLTFLPSADEIYD
CKVEHWGLDQPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVFIIQGLRSVGASRHQGPL
>gi|37498632|gb|AAQ91416.1| MHC class II antigen [Homo sapiens] >gi|37498634|gb|AAQ91417.1| MHC class II antigen [Homo sapiens] >gi|37498636|gb|AAQ91418.1| MHC class II antigen [Homo sapiens] >gi|37498638|gb|AAQ91419.1| MHC class II antigen [Homo sapiens] >gi|37498640|gb|AAQ91420.1| MHC class II antigen [Homo sapiens] >gi|37498642|gb|AAQ91421.1| MHC class II antigen [Homo sapiens] >gi|37498648|gb|AAQ91424.1| MHC class II antigen [Homo sapiens] >gi|37498650|gb|AAQ91425.1| MHC class II antigen [Homo sapiens] >gi|37498652|gb|AAQ91426.1| MHC class II antigen [Homo sapiens] >gi|37498654|gb|AAQ91427.1| MHC class II antigen [Homo sapiens] >gi|37498656|gb|AAQ91428.1| MHC class II antigen [Homo sapiens] >gi|37498658|gb|AAQ91429.1| MHC class II antigen [Homo sapiens] >gi|37529995|gb|AAQ92913.1| MHC class II antigen [Homo sapiens]
DHVASYGVNLYQSYGPSGQYTHEFDGDEQFYVDLGRKETVWCLPVLRQFRFDPQFALTNIAVLKHNLNSLIKRSNSTAAT
NEVPEVTVFSKSPVTLGQPNILICLVDNIFPPVVNITWLSNGHSVTEGVSETSFLSKSDHSFFKISYLTLLPSAEESYDC
KVEHWGLDKPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVFIIRGLRSVGASRHQGPL
>gi|306859|gb|AAA52671.1| MHC HLA-DQA1-alpha protein [Homo sapiens]
MILNKALLLGALALTTVMSPCGGEDIVADHVASYGVNLYQSYGPSGQYTHEFDGDEQFYVDLGRKETVWCLPVLRQFRFD
PQFALTNIAVTKHNLNILIKRSNSTAATNEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSET
SFLSKSDHSFFKISYLTFLPSADEIYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVFIII
RGLRSVGASRHQGPL
>gi|545197060|ref|XP_005603561.1| PREDICTED: MHC class II DQ-alpha isoform X2 [Equus caballus]
MSESLLMLADHLGSYGTNVYQSYGPSGQFTHEFDGDEEFYVDLEKKETVWWLPMFSKFTSFDPQGALRNIATSKYNLDIL
IKLSNSTAATNEVPEVTVFPKSPVMLGQPNTLICLVDNIFPPVINVTWLKDGHSVTEGVSETSFLPKNDHSFFKMSYLTF
LPSADDIYDCKVEHWGLDEPLLKHWEPEIPTPVSELTETVVCALGLAMGLVDIVVGSILISRGLRSDHISCPVKQDQPSI
>gi|296197824|ref|XP_002746461.1| PREDICTED: HLA class II histocompatibility antigen, DQ alpha 1 chain-like [Callithrix jacchus]
MILNKALMLGALVLTTVLTTVMSPCGGEDIAADHVASYGVNLYQSYGPSGQFTHEFDGDEEFYVDLGKKETVWRLPVFST
FTSFDPQGALTNIATMKPGLDILIKRSNCTAATNEVPEVTVFSKSPVALGQPNTLICLVDNIFPPVVNITWLSNGHSVTE
GVTETSFLSKSDHSFFKISYLTFLPSADEIYDCEVEHWGLDEPLLKHWEPEISPPVSELTETVVCTLGLSVGLVGIVVGT
VFIIRGLRSVGASRRQGIL
>gi|479336276|gb|AGJ74714.1| MHC class II antigen, partial [Macaca mulatta]
GEDIVADHVASYGVNLYQTYGLSGQYTHEFDGDEQFYVDLERKETVWRLPLFSKFGGFDPQGALRNLAVGKHNLNILIKH
SNSTAATNEVPEVTVFSKSPVTLGHPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSETSFLSKSDHSFFKISYLTFLPS
ADEIYDCRVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSMGLVGIVVGTVLIIQGLRSVGAS
>gi|226954|prf||1612294A HLA DQw4 alpha
EDIVADHVASYGVNLYQSYGPSGQYTHEFDGDEQFYVDLGRKETVWCLPVLRQFRFDPQFALTNIAVTKHNLNILIKRSN
STAATNEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSETSFLSKSDHSFFKISYLTFLPSAD
EIYDCKVEHWGLDEPLLKHWEPEIPAPNSELTETVVCALGLSVGLVGIVVGTVFIIRGLRSVGASRHQGPL
>gi|479336274|gb|AGJ74713.1| MHC class II antigen, partial [Macaca mulatta]
GEDIVADHVASYGVNLYQTYGLSGQYTHEFDGDEQFYVDLERKETVWRLPLFSKFGGFDPQGALRNLAVSKHNLNIMIKR
SNSTAATNEVPEVTVFSKSPVTLGHPNTLICLVDNIFPPVVNITWLSSGRSVTEGVSETSFLSKSDHSFFKISYLTFLPS
ADEIYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVLIIRGLRSVGAS
>gi|619832|gb|AAC41962.1| MHC class II HLA-DQ-alpha chain, partial [Homo sapiens]
EDIVADHVASYGVNLYQSYGPSGQFTHEFDGDEQFYVDLGRKETVWCLPVLRQFRFDPQFALTNIAVTKHNLNILIKRSN
STAATNEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSETSFLSKSDHSFFKISYLTFLPSAD
EIYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVFIIRGLRSVGASR
>gi|49522212|gb|AAH73977.1| HLA-DQA1 protein [Homo sapiens]
MILNKALLLGALALTTVMSPCGGEDIVADHVASCGVNLYQFYGPSGQFTHEFDGDEQFYVDLEKKETAWRWPEFSKFGGF
DPQGALRNMAVAKHNLNIMIKRYNSTAATNEVPEVTVFSKSPVTLGQPNTLICLDNIFPPVVNITWLSNGHAVTEGVSET
SFLSKSDHSFFKISYLTFLPSADEIYDCKVEHWGLDQPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVFIIQ
GLRSVGASRHQGPL
>gi|291953|gb|AAA35771.1| cell surface glycoprotein, partial [Homo sapiens]
ALTTVMSPCGGEDIVADHVASCGVNLYQFYGPSGQYTHEFDGDEEFYVDLERKETAWRWPEFSKFGGFDPQGALRNMAVA
KHNLNIMIKRYNSTAATNEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGQSVTEGVSETSFLSKSDHSFF
KISYLTFLPSADEIYDCKVEHWGLDQPLLKHWEPEIPAPMSELTETVVCALGLSVGLVAFVVGTVFIIQGLRSVGASRHQ
GPL
>gi|558211516|ref|XP_006107739.1| PREDICTED: SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like [Myotis lucifugus]
MTLNRALIWGALTLTTVLSLCGGEDIVADHVRAYGINVYPYYGSSGQYTHESDGDEEFYVDLDKKETVWQLPMFSEFRNF
DPQVALRNMAIANYTLGILIKSSNSTAAPNKVPEVTVFPKSPVELGQPNTLICAVDNIFPPVINILWLTNGHSVTQGVSE
TSFLSKRDHSFLKISYLTFLPSADDVYDCKVEHWGLDQPLLKHWEPEIPAPMSELTETVVYALGLAVGLVGIVTGTVFII
QGLPPGGASRHQGPL
>gi|348080794|gb|AEP60144.1| MHC class II antigen [Homo sapiens]
MILNKALLLGALALTTVMSPCGGEDIVADHVASCGVNLYQFYGPSGQYTHEFDGDEQFYVDLERKETAWRWPEFSKFGGF
DPQGALRNMAVAKHNLNIMIKRYNSTAATNEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGQSVTEAVSE
TSFLSKSDHSFFKISYLTFLPSADEIYDCKVEHWGLDQPLLKHWEPEIPAPMSELTETVVCALGLSVGLMGIVVGTVFII
QGLRSVGASRHQGPL
>gi|584450024|emb|CDM15082.1| MHC class II protein [Macaca nemestrina] >gi|584450026|emb|CDM15083.1| MHC class II protein [Macaca nemestrina] >gi|671708663|gb|AII81848.1| MHC class II antigen [Macaca nemestrina] >gi|671708671|gb|AII81852.1| MHC class II antigen [Macaca nemestrina]
MILNKALMLGALALTTVMSPCGGEDIVADHVASCGVNLYQTYGLSGQYTHEFDGDEQFYVDLERKETAWRWPELRKFGGF
DPQGALRNLAVAKHNLNIITKDYNSTAATNEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSE
TSFLSKSDHSFFKISHLTFLPSADEIYDCRVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVFII
QGLRSVGASRHQGPL
>gi|571026304|emb|CDK12858.1| MHC class II protein [Macaca nemestrina] >gi|571026306|emb|CDK12859.1| MHC class II protein [Macaca nemestrina] >gi|671708677|gb|AII81855.1| MHC class II antigen [Macaca nemestrina]
MILNKALMLAALALTTVMSPCGGEEIVADHVASYGVNLYQSYGFSGQFTHEFDGDEQFYVDLERKETVWRLPVLSQFSFD
AQFALTNIAVGKQNLNYLMKQSNSTAATNEVPEVTVFSKSPVTLGHPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSET
SFLSKSDHSFFKISYLTFLASADEIYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVFIIR
GLRSVGASRHQGPL
>gi|619824|gb|AAC41958.1| MHC class II HLA-DQ-alpha chain, partial [Homo sapiens]
EDIVADHVASYGVNLYQSYGPSGQYTHEFDGDEQFYVDLGRKETVWCLPVLRQFRFDPQFALTNIAVTKHNLNILIKRSN
STAATNEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSETSFLSKSDHSFFKISYLTFLPSAD
EIYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVFIIRGLRSVGASR
>gi|619826|gb|AAC41959.1| MHC class II HLA-DQ-alpha chain, partial [Homo sapiens] >gi|619828|gb|AAC41960.1| MHC class II HLA-DQ-alpha chain, partial [Homo sapiens]
EDIVADHVASYGVNLYQSYGPSGQYTHEFDGDEQFYVDLGRKETVWCLPVLRQFRFDPQFALTNIAVLKHNLNSLIKRSN
STAATNEVPEVTVFSKSPVTLGQPNILICLVDNIFPPVVNITWLSNGHSVTEGVSETSFLSKSDHSFFKISYLTLLPSAE
ESYDCKVEHWGLDKPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVFIIRGLRSVGASR
>gi|332246123|ref|XP_003272199.1| PREDICTED: HLA class II histocompatibility antigen, DQ alpha 1 chain-like isoform 1 [Nomascus leucogenys] >gi|441594200|ref|XP_004087147.1| PREDICTED: HLA class II histocompatibility antigen, DQ alpha 1 chain-like isoform 2 [Nomascus leucogenys]
MILNKALMLGALALTTVMSPCGGEDIVADHVASCGVNLYQSYGLSGQYTHEFDGDEQFYVDLGRKETAWRWPELSNFGGF
DPQGALRNLAVVKHNLDIMIKRFNSTAATNEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSE
TSFLSKSDHSFFKISYLTFLPSADEIYDCKVEHWGLGEPLLKHWEPEIPAPMSELTETVVCALGLSAGLVGIVVGTVFII
QGLRSVGASRHQGPL
>gi|619814|gb|AAC41953.1| MHC class II HLA-DQ-alpha chain, partial [Homo sapiens]
EDIVADHVASCGVNLYQFYGPSGQFTHEFDGDEQFYVDLEKKETAWRWPEFSKFGGFDPQGALRNMAVAKHNLNIMIKRY
NSTAATNEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGHAVTEGVSETSFLSKSDHSFFKISYLTFLPSA
DEIYDCKVEHWGLDQPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVFIIQGLRSVGASR
>gi|37498644|gb|AAQ91422.1| MHC class II antigen [Homo sapiens] >gi|37498646|gb|AAQ91423.1| MHC class II antigen [Homo sapiens]
DHVASYGVNLYQSYGPSGQYTHEFDGDEQFYVDLGRKETVWCLPVLRQFRFDPQFALTNIAVLKHNLNSLIKRSNSTAAT
NEVPEVTVFSKSPVTLGQPNILICLVDNIFPPVVNITWLSNGHSVTEGVSETSFLSKSDHSFFKISYLTLLPSSEESYDC
KVEHWGLDKPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVFIIRGLRSVGASRHQGPL
>gi|289185479|gb|ADC91877.1| MHC class II antigen [Elephas maximus]
MILNEALTLGVLVLTTMMSNCGGEDIVADHVGCHGTNIYQSYGPNGQHTHEFDGDELFYVDLEKKETVWRLPMFSKFASF
DPQGGLRNIAVLKHNLDILIKRSNSTAAINEVPEVTVFPKSPVTLGQPNLLICFVDNIFPPVINITWLSNGHTVTEGVAE
TNFLPKDDHSFSKISYLTFLPSADDVYDCKVDHWGLEKPLLKHWEPEIPTPMTELTETVVCALGLVVGLVGIVVGTILII
RGLRSGSVSRHQGTL
>gi|355748451|gb|EHH52934.1| hypothetical protein EGM_13474, partial [Macaca fascicularis]
ADHVASYGVNLYQSYGFSGQYSHEFDGDEQFYVDLERKETVWRLPVLSQFSFDAQFALTNIAVGKQNLNYLMKQSNSTAA
TNEVPEVTVFSKSPVTLGHPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSETSFLSKSDHSFFKISYLTFLPSADEIYD
CKVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVFIIRGLRSVGTSRHQGPL
>gi|671708667|gb|AII81850.1| MHC class II antigen [Macaca nemestrina]
MILNKALMLGALALTTVMSPCGGEDIVADHVASCGVNLYQTYGLSGQYTHEFDGDEQFYVDLERKETAWRWPELRKFGGF
DPQGALRNLAVAKHNLNIITKDYNSTAATNEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSE
TSFLSKSDHSFFKISHLTFLPSADEIYDCRVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVFII
QGLRSFGASRHQGPL
>gi|758069|emb|CAA25141.1| DC classII histocompatibility antigen alpha-chain [Homo sapiens] >gi|223912|prf||1004300A antigen alpha,II histocompatibility
MILNKALLLGALALTTVMSPCGGEDIVADHVASCGVNLYQFYGPSGQYTHEFDGDEQFYVDLERKETAWRWPEFSKFGGF
DPQGALRNMAVAKHNLNIMIKRYNSTAATNEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGQSVTEDVSE
TSFLSKSDHSFFKISYLTFLPSADEIYDCKVEHWGLDQPLLKHWEPEIPAPMSELTETVVCALGLSVGLMGIVVGTVFII
QGLRSVGASRHQGPL
>gi|348080812|gb|AEP60145.1| MHC class II antigen [Homo sapiens]
MILNKALLLGALALTTVMSPCGGEDIVADHVASCGVNLYQFYGPSGQYTHEFDGDEQFYVDLERKETAWRWPEFSKFGGF
DPQGALRNMAVAKHNLNIMIKRYNSTAATNEVPEVTVFSKSPVTLDQPNTLICLVDNIFPPVVNITWLSNGQSVTEGVSE
TSFLSKSDHSFFKISYLTFLPSADEIYDCKVEHWGLDQPLLKHWEPEIPAPMSELTETVVCALGLSVGLMGIVVGTVFII
QGLRSVGASRHQGPL
>gi|11095447|ref|NP_064440.1| HLA class II histocompatibility antigen, DQ alpha 2 chain precursor [Homo sapiens] >gi|122192|sp|P01906.2|DQA2_HUMAN RecName: Full=HLA class II histocompatibility antigen, DQ alpha 2 chain; AltName: Full=DX alpha chain; AltName: Full=HLA class II histocompatibility antigen, DQ(6) alpha chain; AltName: Full=HLA-DQA1; AltName: Full=MHC class II DQA2; Flags: Precursor [Homo sapiens] >gi|386876|gb|AAA59605.1| MHC HLA-DX alpha precursor, partial [Homo sapiens] >gi|1199523|emb|CAA25142.1| HLA class II histocompatibility antigen [Homo sapiens] >gi|2094797|emb|CAB06493.1| major histocompatibility complex, class II, DQ alpha 2 [Homo sapiens]
MILNKALLLGALALTAVMSPCGGEDIVADHVASYGVNFYQSHGPSGQYTHEFDGDEEFYVDLETKETVWQLPMFSKFISF
DPQSALRNMAVGKHTLEFMMRQSNSTAATNEVPEVTVFSKFPVTLGQPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSE
TSFLSKSDHSFFKISYLTFLPSADEIYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETLVCALGLSVGLMGIVVGTVFII
QGLRSVGASRHQGLL
>gi|52426774|ref|NP_061984.2| HLA class II histocompatibility antigen, DR alpha chain precursor [Homo sapiens] >gi|188256|gb|AAA59783.1| cell surface glycoprotein [Homo sapiens] >gi|1834460|emb|CAB06609.1| major histocompatibility complex, class II, DR alpha [Homo sapiens] >gi|21619052|gb|AAH32350.1| Major histocompatibility complex, class II, DR alpha [Homo sapiens] >gi|123981384|gb|ABM82521.1| major histocompatibility complex, class II, DR alpha [synthetic construct] >gi|123996227|gb|ABM85715.1| major histocompatibility complex, class II, DR alpha [synthetic construct] >gi|261861252|dbj|BAI47148.1| major histocompatibility complex, class II, DR alpha [synthetic construct] >gi|649119241|gb|AIC54551.1| HLA-DRA, partial [synthetic construct]
MAISGVPVLGFFIIAVLMSAQESWAIKEEHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFE
AQGALANIAVDKANLEIMTKRSNYTPITNVPPEVTVLTNSPVELREPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVSET
VFLPREDHLFRKFHYLPFLPSTEDVYDCRVEHWGLDEPLLKHWEFDAPSPLPETTENVVCALGLTVGLVGIIIGTIFIIK
GLRKSNAAERRGPL
>gi|289185465|gb|ADC91870.1| MHC class II antigen [Loxodonta africana]
MILNEALTLGVLVLTTMMSNGGGEDIVADHVGCYGTNIYQSYGPSGQFTHEFDGDELFYVDLEKKETVWRLPMFSKFESF
DPQLGLRNIAVLKHNLDILIKRSNSTATTNEVPEVTVFPKSPVTLGQPNLLICFVDNIFPPVINITWLSNGHTVTEGVAE
TNFLPKDDHSFSKISYLTFLPSADDVYDCKVDHWGLEKPLLKHWEPEIPTPITELTETVVCALGLVVGLVGIVVGTMLII
QGLRSGSVSRHQGTL
>gi|125489002|gb|ABN42662.1| MHC class II antigen DQ alpha chain [Macaca fascicularis] >gi|337272848|gb|AEI70184.1| MHC class II antigen [Macaca fascicularis] >gi|339333303|emb|CBX60107.1| MHC class II antigen [Macaca fascicularis] >gi|629265922|dbj|BAO74080.1| major histocompatibility complex class II antigen DQA [Macaca fascicularis]
MILNKALMLAALALTTVMSPCGGEEIVADHVASYGVNLYQSYGFSGQYSHEFDGDEQFYVDLERKETVWQLPVLSQFSFD
AQFALTNIAVGKQNLNYLMKQSNSTAATNEVPEVTVFSKSPVTLGHPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSET
SFLSKSDHSFFKISYLTFLASADEIYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVFIIR
GLRSVGASRHQGPL
>gi|1916745|gb|AAB51233.1| MHC class II HLA-DQ-alpha chain [Homo sapiens] >gi|401779709|emb|CCK73388.1| MHC class II antigen [Homo sapiens]
MILNKALLLGALALTTMMSPCGGEGIVADHVASCGVNLYQFYGPSGQYTHEFDGDEEFYVDLERKETAWRWPEFSKFGGF
DPQGALRNMAVAKHNLNIMIKCYNSTAATNEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGQSVTEGVSE
TSFLSKSDHSFFKISYLTFLPSADEIYDCKVEHWGLDQPLLKHWEPEIPAPMSELTETVVCTLGLSVGLVGIVVGTVFII
QGLRSVGASRHQGPL
>gi|37361578|gb|AAQ91107.1| MHC class II antigen [Homo sapiens] >gi|37361582|gb|AAQ91108.1| MHC class II antigen [Homo sapiens] >gi|37361586|gb|AAQ91109.1| MHC class II antigen [Homo sapiens] >gi|37361798|gb|AAQ91106.1| MHC class II antigen [Homo sapiens]
DHVASCGVNLYQFYGPSGQYTHEFDGDEEFYVDLERKETAWRWPEFSKFGGFDPQGALRNMAVAKHNLNIMIKRYNSTAA
TNEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGQSVTEGVSETSFLSKSDHSFFKISYLTFLPSADEIYD
CKVEHWGLDQPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVFIIQGLRSVGASRHQGPL
>gi|569017751|ref|XP_006536585.1| PREDICTED: h-2 class II histocompatibility antigen, A-D alpha chain isoform X1 [Mus musculus] >gi|569019546|ref|XP_006537318.1| PREDICTED: h-2 class II histocompatibility antigen, A-D alpha chain isoform X1 [Mus musculus]
MPCSRALILGVLALNTMLSLCGGEDDIEALAGDGSLTCPSWRHFLSVCLITLFFLPVFHFSTIHLNPSADHVGFYGTTVY
QSPGDIGQYTHEFDGDELFYVDLDKKKTVWRLPEFGQLILFEPQGGLQNIAAEKHNLGILTKRSNFTPATNEAPQATVFP
KSPVLLGQPNTLICFVDNIFPPVINITWLRNSKSVTDGVYETSFLVNRDHSFHKLSYLTFIPSDDDIYDCKVEHWGLEEP
VLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTIFIIQGLRSGGTSRHPGPL
>gi|395728721|ref|XP_002809188.2| PREDICTED: mamu class II histocompatibility antigen, DR alpha chain-like [Pongo abelii]
MAVSGVPMLGVFIIAVLMSAQESRAIKEEHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFE
AQGALANIAVDKANLEIMTKRSNYTPITNVPPEVTVLTNSPVELREPNVLICFIDKFTPPVVNVTWLLNGKPVTTGVSET
VFLPREDHLFRKFHYLPFLPSTEDVYDCKVEHWGLDEPLLKHWEFDAPSSLPETKENVVCALGLIVGLVGIIIGTIFIIK
GVRKSNAAERRGPL
>gi|479336302|gb|AGJ74727.1| MHC class II antigen, partial [Macaca mulatta]
GEDIVADHIASYGVNLYQTYGLSGQFTHEFDGDEQFYVDLERKETVWRLPLFSKFGGFDPQGALRNLAVGKHNLNILIKH
SNSTAATNEVPEVTVFSKSPMTLGHPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSETSFLSKSDHSFFKISYLTFLPS
ADEIYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVLIIRGLRSVGAS
>gi|619830|gb|AAC41961.1| MHC class II HLA-DQ-alpha chain, partial [Homo sapiens]
EDIVADHVASYGVNLYQSYGPSGQYTHEFDGDEQFYVDLGRKETVWCLPVLRQFRFDPQFALTNIAVLKHNLNSLIKRSN
STAATNEVPEVTVFSKSPVTLGQPNILICLVDNIFPPVVNITWLSNGHSVTEGVSETSFLSKSDHSFFKISYLTLLPSSE
ESYDCKVEHWGLDKPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVFIIRGLRSVGASR
>gi|37361590|gb|AAQ91110.1| MHC class II antigen [Homo sapiens] >gi|37361594|gb|AAQ91111.1| MHC class II antigen [Homo sapiens] >gi|37361598|gb|AAQ91114.1| MHC class II antigen [Homo sapiens] >gi|37361602|gb|AAQ91115.1| MHC class II antigen [Homo sapiens] >gi|37361802|gb|AAQ91112.1| MHC class II antigen [Homo sapiens] >gi|37361806|gb|AAQ91113.1| MHC class II antigen [Homo sapiens] >gi|37498668|gb|AAQ91433.1| MHC class II antigen [Homo sapiens]
DHVASCGVNLYQFYGPSGQYTHEFDGDEQFYVDLERKETAWRWPEFSKFGGFDPQGALRNMAVAKHNLNIMIKRYNSTAA
TNEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGQSVTEGVSETSFLSKSDHSFFKISYLTFLPSADEIYD
CKVEHWGLDQPLLKHWEPEIPAPMSELTETVVCALGLSVGLMGIVVGTVFIIQGLRSVGASRHQGPL
>gi|493166|gb|AAA59834.1| MHC HLA-DX-alpha chain [Homo sapiens]
MILNKALLLGALALTAVMSPCGGEDIVADHVASYGVNFYQSHGPSGQYTHEFDGDEEFYVDLETKETVWQLPMFSKFISF
DPQTALRNMAVGKHTLEFMMRQSNSTAATNEVPEVTVFSKFPVTLGQPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSE
TSFLSKSDHSFFKISYLTFLPSADEIYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETLVCALGLSVGLMGIVVGTVFII
QGLRSVGASRHQGLL
>gi|223914|prf||1004300C antigen alpha,II histocompatibility
MILNKALLLGALALTAVMSPCGGEDIVADHVASYGVNFYQSHGPSGQYTHEFDGDEEFYVDLETKETVWQLPMFSKFISF
DPQSALRNMAVGKHTLEFMMRQSNSTAATNEVPEVTVFSKFPVTLGQPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSE
TSFLSKSDHSFFKISYLTFLPSADEIYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETLVCALGLSVGLVGIVVATVFII
RGLRSVGASRHQGPL
>gi|532108542|ref|XP_005338993.1| PREDICTED: mamu class II histocompatibility antigen, DR alpha chain-like [Ictidomys tridecemlineatus]
MARNEVMVLGFFFMAVLMSPQESWAIKEDHTIIQAEFYLHPDELGEFMFDFDGDEIFHVDSKIKETVWRLKEFGQFASFE
AQGALANLAVDKANLDIMMKRSNNTWDSNVPPEVTVLSSGPVELGEPNVLICFIDKFSPPVVNVRWLKNGQPVTTGVSET
VFLPRKDQLFRKFHYLPFLPSNEDFYDCEVDHLGLERPLLKHWAFEDQTPLPETKENVVCALGLVVGLVGIIMGTIFIIK
GTQKSHTGERRGPL
>gi|397174434|emb|CCJ51908.1| MHC class II antigen [Homo sapiens]
MILNKALLLGALALTTVMSPCGGEDIVADHVASCGVNLYQFYGPSGQYTHEFDGDEQFYVDLERKETAWRWPEFSKFGGF
DPQGALRNMAVAKHNLNIMIKRYNSTAATNEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGQSVTEGVSE
TSFLSKSDHSFFKISYLTFLPSADEIYDCKVEHWGLDQPLLKHWEPEILAPMSELTETVVCALGLSVGLMGIVVGTVFII
QGLRSVGASRHQGPL
>gi|1160936|gb|AAA85334.1| HLA-DQ alpha chain, partial [Homo sapiens]
EGIVADHVASCGVNLYQFYGPSGQYTHEFDGDEEFYVDLERKETAWRWPEFSKFGGFDPQGALRNMAVAKHNLNIMIKRY
NSTAATNEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGQSVTEGVSETSFLSKSDHSFFKISYLTFLPSA
DEIYDCKVEHWGLDQPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVFIIQGLRSVGASR
>gi|126309759|ref|XP_001376764.1| PREDICTED: h-2 class II histocompatibility antigen, A-B alpha chain-like [Monodelphis domestica]
MASSRVLILGTLSLVMLLSPWAASEFIKADHVGTYGTTMAQSYGPSGQYTMECDEDEIFYVDQQKKETVWRLPEFSHFAG
YDPQGGLRNIDVMEHNLDILIKRSNRTRAIPVAPEVTVFSESPVELDQPNVLICLVDNIFPPVVNITWLRNGQIITTGVS
GTEFYPRSDHRFQKFYYLTFLPNTEDVYDCQVEHWGLEQPVLRHWEPQFPSPLPETTETVVCALGLAVGLVGIILGTILI
IKSMRSSSRIQLQGPL
>gi|289185477|gb|ADC91876.1| MHC class II antigen [Elephas maximus]
MILNEALTLGVLVLTTMMSNGGGEDIVADHVGCYGTNIYQSYGPNGQFSHEFDGDELFYVDLEKKETVWRLPMFSKFESF
DPQLGLRNIAVLKHNLDILIKRSNSTATTNEVPEVTVFPKSPVTLGQPNLLICFVDNIFPPVINITWLSNGHTVTEGVAE
TNFLPKDDHSFSKISYLTFLPSADDVYDCKVDHWGLEKPLLKHWEPEIPTPITELTETVVCALGLVVGLVGIVVGTMLII
QGLRSGSVSRHQGTL
>gi|123231712|emb|CAM26196.1| major histocompatibility complex, class II, DQ alpha 2 [Homo sapiens]
MILNKALLLGALALTAVMSPCGGEDIVADHVASYGVNFYQSHGPSGQYTHEFDGDEEFYVDLETKETVWQLPMFSKFISF
DPQSALRNMAVGKHTLEFMMGQSNSTAATNEVPEVTVFSKFPVTLGQPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSE
TSFLSKSDHSFFKISYLTFLPSADEIYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETLVCALGLSVGLMGIVVGTVFII
QGLRSVGASRHQGLL
>gi|332246117|ref|XP_003272196.1| PREDICTED: mamu class II histocompatibility antigen, DR alpha chain-like isoform 1 [Nomascus leucogenys] >gi|441594190|ref|XP_004087145.1| PREDICTED: mamu class II histocompatibility antigen, DR alpha chain-like isoform 2 [Nomascus leucogenys]
MAVSGVPVLGFFIIAVLMRAQESRAIKEEHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFE
AQGALANIAVDKANLEIMTKRSNSTPITNVPPEVTVLTDSPVELREPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVSET
VFLPREDHLFRKFHYLPFLPSTEDVYDCKVEHWGLDEPLLKHWEFDAPSPLPETTENVVCALGLIVGLVGIITGTIFIIK
GVRKSNAAERRGPL
>gi|619808|gb|AAC41950.1| MHC class II HLA-DQ-alpha chain, partial [Homo sapiens]
EDIVADHVASCGVNLYQFYGPSGQYTHEFDGDEEFYVDLERKETAWRWPEFSKFGGFDPQGALRNMAVAKHNLNIMIKRY
NSTAATNEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGQSVTEGVSETSFLSKSDHSFFKISYLTFLPSA
DEIYDCKVEHWGLDQPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVFIIQGLRSVGASR
>gi|488548172|ref|XP_004465578.1| PREDICTED: HLA class II histocompatibility antigen, DR alpha chain-like isoform 1 [Dasypus novemcinctus] >gi|488548174|ref|XP_004465579.1| PREDICTED: HLA class II histocompatibility antigen, DR alpha chain-like isoform 2 [Dasypus novemcinctus]
MLPSRPHLPPVPALHDSSIPLGRPLPPHLPTCVCLTSWVLPHPPLLLPTLTPFPSFSEEHVIIQAEFYQTPNPSGEFMFD
FDGDEIFHVDLDKKETVWRLEEFGRFSSFEAQGALANIAVDKANLEIMMKRSNYTPDTSVPPEVTVLLNRPVELGQPNIL
ICFVDKFSPPVINVTWLQNGKPVTTGVSETVFLPRDDHLFRKFHYLPFLPSTEDVYDCKVEHWGLDEPLLKHWEFEGPTP
LPETTENVVCALGLVVGLVGIVVGTTLIIKGMRKGNAAERRGPL
>gi|197245454|ref|NP_001127811.1| major histocompatibility complex, class II, DR alpha precursor [Pan troglodytes] >gi|397519314|ref|XP_003829807.1| PREDICTED: HLA class II histocompatibility antigen, DR alpha chain-like [Pan paniscus] >gi|193227801|emb|CAP40290.1| MHC class II antigen [Pan troglodytes verus]
MAVSGVPVLGFFIIAVLMSAQESWAIKEEHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFE
AQGALANIAVDKANLEIMTKRSNYTPITNVPPEVTVLTNSPVELREPNILICFIDKFTPPVVNVTWLRNGKPVTTGVSET
VFLPREDHLFRKFHYLPFLPSTEDVYDCRVEHWGLDEPLLKHWEFDAPSPLPETTENVVCALGLTVGLVGIIIGTIFIIK
GVRKSNAAERRGPL
>gi|218675581|gb|ACL00582.1| MHC class II antigen [Pongo pygmaeus]
MLGVFIIAVLMSAQESRAIKEEHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALAN
IAVDKANLEIMTKRSNYTPITNVPPEVTVLTNSPVELREPNVLICFIDKFTPPVVNVTWLLNGKPVTTGVSETVFLPRED
HLFRKFHYLPFLPSTEDVYDCKVEHWGLDEPLLKHWEFDAPSSLPETKENVVCALGLIVGLVGIIIGTIFIIKGVRKSNA
AERR
>gi|619810|gb|AAC41951.1| MHC class II HLA-DQ-alpha chain, partial [Homo sapiens] >gi|619812|gb|AAC41952.1| MHC class II HLA-DQ-alpha chain, partial [Homo sapiens]
EDIVADHVASCGVNLYQFYGPSGQYTHEFDGDEQFYVDLERKETAWRWPEFSKFGGFDPQGALRNMAVAKHNLNIMIKRY
NSTAATNEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGQSVTEGVSETSFLSKSDHSFFKISYLTFLPSA
DEIYDCKVEHWGLDQPLLKHWEPEIPAPMSELTETVVCALGLSVGLMGIVVGTVFIIQGLRSVGASR
>gi|355570537|gb|EHH25667.1| hypothetical protein EGK_21600, partial [Macaca mulatta]
ADHVASYGVNLYQSYGFSGQYSHEFDGDEQFYVDLERKETVWQLPVLSQFSFDAQFALTNIAVGKQNLNYLMKQSNSTAA
TNEVPEVTVFSKSPVTLGHPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSETSFLSKSDHSFFKISYLTFLASADEIYD
CKVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVFIIRGLRSVGASRHQGPL
>gi|37529983|gb|AAQ92910.1| MHC class II antigen [Homo sapiens] >gi|37529987|gb|AAQ92911.1| MHC class II antigen [Homo sapiens] >gi|37529991|gb|AAQ92912.1| MHC class II antigen [Homo sapiens]
DHVASCGVNLYQFYGPSGQYTHEFDGDEEFYVDLERKETAWRWPEFSKFGGFDPQGALRNMAVAKHNLNIMIKRYNSTAA
TNEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGQSVTEGVSETSFLSKSDHSFFKISYLTFLPSADEIYD
CKVEHWGLDQPLLKHWEPEIPAPMSELTETVVCTLGLSVGLVGIVVGTVFIIQGLRSVGASRHQGPL
>gi|625228477|ref|XP_007653410.1| PREDICTED: H-2 class II histocompatibility antigen, E-U alpha chain isoform X1 [Cricetulus griseus]
MATTGALVLRLFFMAVLLSPQKSWAIKVVGTPTTCVTQQTLRGQRSPLLSSVYRRAAEFFLSPDEKGEFMFDFDGDEIFH
VDIRKSETIWRLEEFGQFASFEAQGALANIAVDKANLDIMIKRSNHTPDVNVSPEVTVLPNSPVSLGEPNILICFIDKFS
PPVVNVTWLRNGQPVTTGVSETVFLPREDHLFRKFYYLTFLPTTEDVYDCVVDHWGLEEPLLKHWEFEEHTPLPETKENL
VCALGLFVGIVGIIAGVVFIIKGMQKRNAAERRQGAL
>gi|218675573|gb|ACL00578.1| MHC class II antigen [Pan troglodytes] >gi|218675575|gb|ACL00579.1| MHC class II antigen [Pan troglodytes]
VLGFFIIAVLMSAQESWAIKEEHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALAN
IAVDKANLEIMTKRSNYTPITNVPPEVTVLTNSPVELREPNILICFIDKFTPPVVNVTWLRNGKPVTTGVSETVFLPRED
HLFRKFHYLPFLPSTEDVYDCRVEHWGLDEPLLKHWEFDAPSPLPETTENVVCALGLTVGLVGIIIGTIFIIKGVRKSNA
AERR
>gi|619816|gb|AAC41954.1| MHC class II HLA-DQ-alpha chain, partial [Homo sapiens]
EGIVADHVASCGVNLYQFYGPSGQYTHEFDGDEEFYVDLERKETAWRWPEFSKFGGFDPQGALRNMAVAKHNLNIMIKRY
NSTAATNEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGQSVTEGVSETSFLSKSDHSFFKISYLTFLPSA
DEIYDCKVEHWGLDQPLLKHWEPEIPAPMSELTETVVCTLGLSVGLVGIVVGTVFIIQGLRSVGASR
>gi|426352624|ref|XP_004043811.1| PREDICTED: mamu class II histocompatibility antigen, DR alpha chain-like isoform 1 [Gorilla gorilla gorilla] >gi|426352626|ref|XP_004043812.1| PREDICTED: mamu class II histocompatibility antigen, DR alpha chain-like isoform 2 [Gorilla gorilla gorilla] >gi|426352628|ref|XP_004043813.1| PREDICTED: mamu class II histocompatibility antigen, DR alpha chain-like isoform 3 [Gorilla gorilla gorilla]
MAVSGVPVLGFFIIAVLMRTQESWAIKEEHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFE
AQGALANIAVDKANLEIMTKRSNYTPITNVPPEVTVLTNSPVELREPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVSET
VFLPREDHLFRKFHYLPFLPSTEDVYDCRVEHWGLDEPLLKHWEFDAPSPLPETTENVVCALGLTVGLVGIIIGTIFIIK
GVRKSNAAERRGPL
>gi|119624034|gb|EAX03629.1| major histocompatibility complex, class II, DR alpha, isoform CRA_a [Homo sapiens]
MAISGVPVLGFFIIAVLMSAQESWAIKEEHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFE
AQGALANIAVDKANLEIMTKRSNYTPITNVPPEVTVLTNSPVELREPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVSET
VFLPREDHLFRKFHYLPFLPSTEDVYDCRVEHWGLDEPLLKHWEFDAPSPLPETTENVVCALGLTVGLVGIIIGTIFIIK
GVMVFLREKITEETSALMTLQSWQYYNP
>gi|640821989|ref|XP_008067963.1| PREDICTED: HLA class II histocompatibility antigen, DR alpha chain [Tarsius syrichta]
MAISGVPVLRLFLMAVLMSPQKSWAIKEEHVIIQAEFYLSPDKEGEFMFDFDGNEIFHVDLQKKETIWRLKEFGQFASFE
AQGALANMAVDKANLEIMIQRSNHTPDTNVSPEVTVLTSSPVELGEPNVLICFIDKFSPPVINVTWLRNGKPVTSGVSET
VFLPREDHLFRKFHYLPFLPSTEDFYDCKVEHLAWDEPHLKHWEFDAPTPFPETTENVVCALGLIVGLVGIIIGTIFIIK
GLRKNNGAERRGPL
>gi|193227803|emb|CAP40291.1| MHC class II antigen [Pan troglodytes verus]
MAVSGVPVLGFFIIAVLMGAQESWAIKEEHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFE
AQGALANIAVDKANLEIMTKRSNYTPITNVPPEVTVLTNSPVELREPNILICFIDKFTPPVVNVTWLRNGKPVTTGVSET
VFLPREDHLFRKFHYLPFLPSTEDVYDCRVEHWGLDEPLLKHWEFDAPSPLPETTENVVCALGLTVGLVGIIIGTIFIIK
GVRKSNAAERRGPL
>gi|479336294|gb|AGJ74723.1| MHC class II antigen, partial [Macaca mulatta]
GEDIVADHLASYGVNFYQSYGLSGQYSHEFDGDEQFYVDLGRKETVWRLPIPYRYGFDPQFALRNIAVLTHNLNVLIKRS
NSTAATNEVPEVTVFSKSPVTLGHPNTLICLVDHIFPPVVNITWLSNGRSVTEGVSETSFLSKSDHSFFKISYLTFLPSA
DEIYDCRVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSAGLVGIVVGTILIIRGLRSVGAS
>gi|188207|gb|AAA59774.1| MHC HLA-DQ-alpha precursor, partial [Homo sapiens]
VNLYQSYGPSGQYTHEFDGDEQFYVDLGRKETVWCLPVLRQFRXFDPQFALTNIAVLKHNLNSLIKRSNSTAATNEVPEV
TVFSKSPVTLGQPNILICLVDNIFPPVVNITWLSNGHSVTEGVSETSFLSKSDHSFFKISYLTLLPSAEESYDCKVEHWG
LDKPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVFIIRGLRSVGASRHQGPL
>gi|558211829|ref|XP_006107803.1| PREDICTED: HLA class II histocompatibility antigen, DR alpha chain-like [Myotis lucifugus]
MAIIGGPVLGFFITVVLVCLQDSWAIKEDHVIIQAEFYMKPDESGEFMFDFDGDEIFHVDMQKKETVWRLKEFGQFASFE
AQGALANIAVDKANLETMIKRSNNTPNSNVPPEMTVFPNNPVELGEPKILICFIDKFSPPVVNVTWFRNGKPVTTGVSET
VFLPRQDHLFRKFYYLPFLPSNDDFYDCQVEHWGLDEPLIKHWEFEAPTPLPETTENVVCGLGLVVGLVGIIVGTVLIIK
GMRKGHAAERRGPL
>gi|122205|sp|P04227.1|HA2Q_MOUSE RecName: Full=H-2 class II histocompatibility antigen, A-Q alpha chain, partial [Mus musculus] >gi|387460|gb|AAA39620.1| MHC H2-IA-alpha, partial [Mus musculus]
GIVVYQSPGDIGQYTHEFDGDEWFYVDLDKKETVWMLPEFGQLTSFDPQGGLQNIATGKHNLGGWTKRSNFTPATNEAPQ
ATVFPKSPVLLGQPNTLICFVDNIFPPVINITWLRNSKSVTDGVYETSFLVNRDHSFHKLSYLTFIPSDDDIYDCKVEHW
GLDEPVLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTIFIIQGLRSGGTSRPPGPL
>gi|126309765|ref|XP_001376837.1| PREDICTED: SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like isoform X1 [Monodelphis domestica]
MAAGRILILETLSLVMLLSPWAASESIEADHVGRYGTTMAQSYGPSGQYTMEFDEDELFYVDQQKKETVWRLPEFSHFAG
FDPQTGLREIATNEHNLDCLIKRSNRTKAIPVAPEVTVFPESPVELDQPNVLICLVDNIFPPVVNITWLCNGQVITTGVS
GTEFYPRSDYKFRKFYYLTFLPNTEDVYDCQVEHWGLEQPIFRYWEPQFPSPLPETTETMVCALGLAVGLVGIILGTILI
IKSMCSSSRIQLQGPL
>gi|218675577|gb|ACL00580.1| MHC class II antigen [Gorilla gorilla] >gi|218675579|gb|ACL00581.1| MHC class II antigen [Gorilla gorilla]
VLGFFIIAVLMRTQESWAIKEEHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALAN
IAVDKANLEIMTKRSNYTPITNVPPEVTVLTNSPVELREPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVSETVFLPRED
HLFRKFHYLPFLPSTEDVYDCRVEHWGLDEPLLKHWEFDAPSPLPETTENVVCALGLTVGLVGIIIGTIFIIKGVRKSNA
AERR
>gi|390196936|gb|AFL70563.1| MHC class II protein, partial [Macaca fascicularis]
GGEDIVADHVASCGVNLYQSYGPSGQFTHEFDGDEQFYVDLGRKETAWRWPELSKFGGFDPQGALRNLAAAKHNLNILTK
RYNFTAATNEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSETSFLSKSDHSFFKISYLTFLP
SADEIYDCRVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVFIIQGLRSVGASR
>gi|558196426|ref|XP_006104491.1| PREDICTED: SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like [Myotis lucifugus]
MTQNRVLIWGALTLTTVLGRCGGEDIVADHVGAYGINVYQSYGPSGQYTHEFDGDEEFYVDLDKKETVCWLLGFSEFKYF
DIQTALINMAIFKYNLDLLIKRSNYTAAPNKVPEVTVFPKSPVELGQPNTLICAVDNIFPPVINISWLSNGHSVTQGVSE
TSFLSKSDDSFLKFSYLTFLPSADDVYDCKVEHWGLDQPLLKHWEPEIPAPMSELTETVVCALGLAMGLVGIITGTIFII
QGLRPGGISRQQGPL
>gi|55626436|ref|XP_527354.1| PREDICTED: HLA class II histocompatibility antigen, DQ alpha 2 chain [Pan troglodytes] >gi|397474384|ref|XP_003808661.1| PREDICTED: HLA class II histocompatibility antigen, DQ alpha 2 chain-like [Pan paniscus]
MILNKALLLGALALTAVMSPCGGEDIVADHVASYGVNFYQSHGPSGQYTHEFDGDEEFYVDLETKETVWQLPMFSKFISF
DPQSALRNMAVGKHTLEFMIKQSNSTAATNEVPEVTVFSKFPVTLDQPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSE
TSFLSKSDHSFFKISYLTFLPSADEIYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETLVCALGLSAGLMGIVVGTVFII
QGLHSVGASRHQGLL
>gi|558218272|ref|XP_006109146.1| PREDICTED: SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like [Myotis lucifugus]
MNLNRALIWGALTLTTVLGRCGGEDIVADHVGAYGINVFQSYGPFGQYTHEFDGEEEFYADLSKKETVCWLPGFSEFKYF
DTRNALRNMAMLKYNLHLLIERSNYKTAPNKVPEVTVFPKAPVELGQPNTLICAVDNIFPPVINISWLSNGHSVTQGVSE
TSFLSKSDDSFLKFSYLAFLPSADNVYDCKVEHWGLNQPLLKRWEPEIPVPMSELMETVVCALGLAMGLVGIITGAIFII
QGLRPGGVSRQQGPL
>gi|390196912|gb|AFL70551.1| MHC class II protein, partial [Macaca fascicularis] >gi|390196926|gb|AFL70558.1| MHC class II protein, partial [Macaca fascicularis] >gi|390196930|gb|AFL70560.1| MHC class II protein, partial [Macaca fascicularis] >gi|390196962|gb|AFL70576.1| MHC class II protein, partial [Macaca fascicularis]
GGEDIVADHVASCGVNVYQSYGPSGQYTHEFDGDEQFYVDLGRKETAWRWPELSKFGGFDPQGALRNLATAKYNLNIMTK
RYNSTAATNEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGRSVTEGVSETSFLSKSDHSFFKISYLTFLP
SADEIYDCRVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSAGLVGIVVGTVFIIQGLRSVGASR
>gi|199501|gb|AAA39638.1| MHC H2-IE-alpha cell surface glycoprotein, partial [Mus musculus]
KEEHTIIQAEFYLLPDKRGEYMFDFDGDEIFHVDIEKSETIWRLEEFAKFASFEAQGALANIAVDKANLDVMKKRSNNTP
DANVAPEVTVLSRSPVNLGEPNILVCFIDKFSPPVVNVTWLRNGQPVTEGVSETVFLPRDDHLFRKFHYLTFLPSTDDFY
DCEVDHWGLEEPLRKHWEFEEKTLLPETKENVVCALGLFVGLVGIVVGIILIMKGIKKRNVVERRQGAL
>gi|218675585|gb|ACL00584.1| MHC class II antigen [Nomascus gabriellae]
VLGFFIIAVLMRAQESRAIKEEHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALAN
IAVDKANLEIMTKRSNYTPITYVPPEVTVLTDSPVELREPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVSETVFLPRED
HLFRKFHYLPFLPSTEDVYDCKVEHWGLDEPLLKHWEFDAPSPLPETTENVVCALGLIVGLVGIITGTIFIIKGVRKSNA
AERR
>gi|554555655|ref|XP_005872269.1| PREDICTED: HLA class II histocompatibility antigen, DR alpha chain-like [Myotis brandtii]
MAIIGDPALGFFITVVLVCLQESWAIKEDHVIIQAEFYMKPDESGEFMFDFDGDEIFHVDMQKKETVWRLKEFGQFASFE
AQGALANIAVDKANLETMIKRSNHTPNSNVPPEMTVFPNNPVELGEPNMLICFIDKFSPPVVNVTWFRNGKPVTTGVSET
VFLPREDHLFRKFYYLPFLPSNDDVYDCQVEHWGLDEPLIKHWEFEAQTPLPETTENVVCGLGLVVGLVGIIVGTVLIIK
GMRKGHAAERRGPL
>gi|390196904|gb|AFL70547.1| MHC class II protein, partial [Macaca fascicularis]
GGEDIVADHVASCGVNLYQTYGLSGQFTHEFDGDEQFYVDLRRKETAWRWPELSKFGGFDPQGALRNLAVLKHNLNIVTK
RYNSTAATNEVPEVTVFSKSPVTLGHPNTLICLVDNIFPPVVNITWLSNGRSVTEGVSETSFLSKSDHSFFKISYLTFLP
SADEIYDCRVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVFIIQGLRSVGASR
>gi|833790|emb|CAA77679.1| OLA-DRA [Ovis aries]
MAITRVPILGLFITVLISLQESWAIKEDHVIIQAEFYLNPEESAEFMFDFDGDEIFHVDMQKKETVWRLPEFGHFASFEA
QGALANMAVMKANLDIMIKRSNNTPNTNVPPEVTLLPNKPVELGEPNTLICFIDKFSPPVISVTWLRNGIPVTDGVSQTV
FLPRDDHLFRKFHYLPFLPTTEDVYDCKVEHWEYEAPAPLPETTENAVCALGLIVALVGIIAGTIFIIKGVRKANTVEGR
GPL
>gi|479336296|gb|AGJ74724.1| MHC class II antigen, partial [Macaca mulatta]
GEDIVADHVASCGVNLYQSYGPSGQFTHEFDGDEQFYVDLGRKETAWRWPELSKFGGFDPQGALRNLAAAKHNLNILTKR
YNFTAATNEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGRSVTEGVSETSFLSKSDHSFFKISYLTFLPS
ADEIYDCRVEHWGLDEPLLKHWEPEIPAPMSELTETVVCTLGLSVGLVGIVVGTVFIIQGLRSVGAS
>gi|664778027|ref|XP_008508323.1| PREDICTED: mamu class II histocompatibility antigen, DR alpha chain [Equus przewalskii]
MAISGVPMLGLFITAVLMSFQESRAIKEDHVIIQAEFYLKPGDSGEFMFDFDGDEIFHVDMDKKETVWRLEEFGRFTSFE
AQGALANIAVDKANLEIMMKRSNNTPNTNVPPEVTVLPNKPVELGEPNVLICFIDKFSPPVIDVTWLKNGKPVTMGVSET
VFLPRDDQLFRKFHYLPFLPSTEDVYDCKVEHWGLDEPLLKHWEFEAPTPLSETTENVVCGLGLVVGLVGIIVGTIFIIK
GVRKGNAVERRGPL
>gi|344298838|ref|XP_003421098.1| PREDICTED: SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like [Loxodonta africana]
MILNEALTLGVFVLTTMMSNCGGEDIVADHVGCYGTTIYQSYGPGGQYTQEFDGDELFYVNLEKKETVWRLPMFSKFAGF
DPQGGLRNIAVLKHNLDILIKLSNSTAATNEVPEVTVFPKSPVTLGQPNLLICFVDNIFPPVINITWLSNGHTVTEGVAE
TNFLPKDDHSFSKISYLTFLPSDDDVYDCKVDHWGLERPLLKHWEPEIPTPVTELTETVVCALGLVVGLVGIVVGTILII
RGLRSGSVSRHQGTL
>gi|390196922|gb|AFL70556.1| MHC class II protein, partial [Macaca fascicularis] >gi|390196942|gb|AFL70566.1| MHC class II protein, partial [Macaca fascicularis]
GGEDIVADHVASCGVNLYQTYGLSGQYTHEFDGDERFYVDLERKETAWRWPELSKFGGFDPQGALRNLAVLKHTLNIVTK
RYNSTAATNEVPEVTVFSKSPVMLGQPNTLICLVDNIFPPVVNITWLSNGRSVTEGVSETSFLSKSDHSFFKISYLTFLP
SADEIYDCRVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVFIIQGLRSVGASR
>gi|479336322|gb|AGJ74737.1| MHC class II antigen, partial [Macaca mulatta] >gi|479336326|gb|AGJ74739.1| MHC class II antigen, partial [Macaca mulatta]
FYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMTKRSNNTPITNVPPEVTV
LTNSPVELGEPNVLICFIDKFSPPVVKVTWLKNGKPVTTGVSETVFLPREDHLFRKFHYLPFLPSTEDIYDCKVEHWGLD
APLLKHWEFDAPSPLPETTENVVCALGLIVGLVGIIVG
>gi|479336308|gb|AGJ74730.1| MHC class II antigen, partial [Macaca mulatta] >gi|479336310|gb|AGJ74731.1| MHC class II antigen, partial [Macaca mulatta] >gi|479336312|gb|AGJ74732.1| MHC class II antigen, partial [Macaca mulatta] >gi|479336316|gb|AGJ74734.1| MHC class II antigen, partial [Macaca mulatta] >gi|479336320|gb|AGJ74736.1| MHC class II antigen, partial [Macaca mulatta] >gi|479336324|gb|AGJ74738.1| MHC class II antigen, partial [Macaca mulatta] >gi|479336328|gb|AGJ74740.1| MHC class II antigen, partial [Macaca mulatta]
FYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMTKRSNNTPITNVPPEVTV
LTNSPVELGEPNVLICFIDKFSPPVVKVTWLKNGKPVTTGVSETVFLPREDHLFRKFHYLPFLPSTEDIYDCKVEHWGLD
APLLKHWEFDAPSPLPETTENVVCALGLIVGLVGIIVGI
>gi|1335101|emb|CAA25076.1| HLA-DR alpha heavy chain [Homo sapiens]
IKEEHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMTKRSNYT
PITNVPPEVTVLTNSPVELREPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVSETVFLPREDHLFRKFHYLPFLPSTEDV
YDCRVEHWGLDEPLLKHWEFDAPSPLPETTENVVCALGLTVGLVGIIIGTIFIIKGLRKSNAAERRGPL
>gi|408717214|gb|AFU83053.1| MHC class II antigen [Equus caballus] >gi|408717216|gb|AFU83054.1| MHC class II antigen [Equus caballus]
MAISGVPMLGLFITAVLMSFQESRAIKEDHVIIQAEFYLKPGDSGEFMFDFDGDEIFHVDMDKKETVWRLEEFGRFASFE
AQGALANIAVDKANLEIMMKRSNNTPNTNVPPEVTVLPNKPVELGEPNVLICFVDKFSPPVIDVTWLKNGKPVTMGVSET
VFLPRDDQLFRKFHYLPFLPSTEDVYDCKVEHWGLDEPLLKHWEFEAPTPLSETTENVVCGLGLVVGLVGIIVGTIFIIK
GVRKGNTVERRGPL
>gi|548960584|ref|NP_001271471.1| MHC class II DR alpha chain precursor [Equus caballus] >gi|408717222|gb|AFU83057.1| MHC class II antigen [Equus caballus]
MAISGVPMLGLFITAVLMSFQESRAIKEDHVIIQAEFYLKPGDSGEFMFDFDGDEIFHVDMDKKETVWRLEEFGRFASFE
AQGALANIAVDKANLEIMMKRSNNTPNTNVPPEVTVLPNKPVELGEPNVLICFVDKFSPPVIDVTWLKNGKPVTMGVSET
VFLPRDDQLFRKFHYLPFLPSTEDVYDCKVEHWGLDEPLLKHWEFEAPTPLSETTENVVCGLGLVVGLVGIIVGTIFIIK
GVRKGNAVERRGPL
>gi|339333307|emb|CBX60109.1| MHC class II antigen [Macaca fascicularis] >gi|629510162|dbj|BAO74184.1| major histocompatibility complex class II DQ alpha chain [Macaca fascicularis]
MILNKALLLGALALTTVMSPCGGEDIVADHVASCGVNLYQSYGPSGQYTHEFDGDEQFYVDLERKETAWRWPELRKFGGF
DPQGALRNLAVAKHNLNIITKDYNSTAATNEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSE
TSFLSKSDHSFFKISHLTFLPSADEIYDCRVEHWGLDEPILKHWEPEIPAPMSELTETVVCALGLSAGLVGIVVGTVFII
QGLRSVGASRHQGPL
>gi|408717220|gb|AFU83056.1| MHC class II antigen [Equus caballus]
MAISGVPMLGLFITAVLMSFQESRAIKEDHVIIQAEFYLKPGDSGEFMFDFDGDEIFHVDMDKKETVWRLEEFGRFTSFE
AQGALANIAVDKANLEIMMKRSNNTPNTNVPPEVTVLPNKPVELGEPNVLICFVDKFSPPVIDVTWLKNGKPVTMGVSET
VFLPRDDQLFRKFHYLPFLPSTEDVYDCKVEHWGLDEPLLKHWEFEAPTPLSETTENVVCGLGLVVGLVGIIVGTIFIIK
GVRKGNAVERRGPL
>gi|479336292|gb|AGJ74722.1| MHC class II antigen, partial [Macaca mulatta]
GEDIVADHVASCGVNLYQTYGLSGQFTHEFDGDEQFYVDLRRKETAWRWPELSKFGGFDPQGALRNLAVLKHNLNIVTKR
YNSTAATNEVPEVTVFSKSPVTLGHPNTLICLVDNIFPPVVNITWLSNGRSVTEGVSETSFLSKSDHSFFKISYLTFLPS
ADEIYDCRVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVFIIQGLRSVGAS
>gi|641730570|ref|XP_008155535.1| PREDICTED: HLA class II histocompatibility antigen, DR alpha chain [Eptesicus fuscus]
MAIIGDPVLGFFITVVLVCLQESWAIKEDHVIIQAEFFMEPDLTGEFMFDFDGDEIFHVDMQKKETVWRLEEFGKFASFE
AQGALANIAVDKANLETMMKRSNYTPNTNVPPEMTVFPNKAVELGEPNILICFIDKFSPPVLNVTWLQNGKPVTTGVSET
VFLPREDHLFRKFYYLPFLPSNEDVYDCKVEHWGLEEPLIKHWEFEAQTPLPETTENVVCGLGLVVGLVGIIVGTVLIIK
GVRKGHAAERRGPL
>gi|479336318|gb|AGJ74735.1| MHC class II antigen, partial [Macaca mulatta]
FYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMTKRSNNTPITNVPPEVTV
LTNSPVELGEPNVLICFIDKFSPPVVKVTWLKNGKPVTTGVSETVFLPREDHLFRKFHYLPFLPSTEDIYDCKVEHWGLD
VPLLKHWEFDAPSPLPETTENVVCALGLIVGLVGIIVGI
>gi|479336306|gb|AGJ74729.1| MHC class II antigen, partial [Macaca mulatta]
FYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMTKRSNNTPITNVPPEVTV
LTNSPVELGEPNVLICFIDKFSPPVVKVTWLKNGKPVTTGVSETVFLPREDHLFRKFHYLPFLPSTEDIYDCKVEHWGLD
APLLKHWEFDVPSPLPETTENVVCALGLIVGLVGIIVGI
>gi|408717218|gb|AFU83055.1| MHC class II antigen [Equus caballus]
MAISGVPMLGLFITAVLMSFQESRAIKEDHVIIQAEFYLKPGDSGEFMFDFDGDEIFHVDMDKKETVWRLEEFGHFASFE
AQGALANIAVEKANLEIMMKRSNNTPNTNVPPEVTVLPNKPVELGEPNVLICFVDKFSPPVIDVTWLKNGKPVTMGVSET
VFLPRDDQLFRKFHYLPFLPSTEDVYDCKVEHWGLDEPLLKHWEFEAPTPLSETTENVVCGLGLVVGLVGIIVGTIFIIK
GVRKGNAVERRGPL
>gi|641737629|ref|XP_008159491.1| PREDICTED: HLA class II histocompatibility antigen, DQ alpha 2 chain-like [Eptesicus fuscus]
MTLNRALIWGALALTTVLSCCGGEDIVADHVGAYGINVYHSYSSSGQYTHEFDGDEEFYVDLGKKETVWQLPMFSEFRNF
DPHRALQNMAIANYTLDLLIKRSNSTAAPNKVPEVTVFPKSPVELGQPNTLICAVDNIFPPVINISWLSNGHYVTQGVSE
TSFLSKKDHSFFKISYLTFLPSADDVYDCRVEHWGLDQPLLKHWEPEIPAPMSELTETVVCALGLAVGLVGIITGTIVII
QGLRPAGASRQQGPL
>gi|507577036|ref|XP_004672052.1| PREDICTED: HLA class II histocompatibility antigen, DR alpha chain-like [Jaculus jaculus]
MTTNGALVLMFSMALLVSPQESWAIKEEHKIIQAEFYLAPDKIGEFMFDFDGDEIFHVDMQKSETVWRLTEFGQFASFEA
QGALANIAVDKANLDIMMKRSNYTPAPPVPPEVTVLSKGPVELGEPNILICFIDKFSPPMVNVTWLQNGKPVTTGVSETV
FLPREDHLFRKFHYLTFVPSTEDVYDCMVDHWGLEKPVLKHWEFEEQTSLPETTENVVCALGLIMGLVGIITGTIFIIKG
MHKQNAREHRQGNLCGAHGLWSQGRLIAGTGHLREAGGQCGSSRKKVTARKRYGAIALRRNVWARNLRDSKPSSLTPDYM
CPTTGGDLRRKINEEISAVIVFGR
>gi|532058969|ref|XP_005372170.1| PREDICTED: h-2 class II histocompatibility antigen, A-F alpha chain-like [Microtus ochrogaster]
MHNIRYNSFHILTDHVGAYGILFYQSCGPNGQYTMEFDGDEKLYVDSDKKETIWRIPEFGQLLTFDPQAGLQEIATGKHN
LDVLTKGTNSTPATNEVPEVTVFPKSPVLLGQPNTLICFVDNIFPPVVNITWLRNKKSVTETVYETSFITKSDHSFQKMS
YLTFIPSDDDVYDCKVEHWGLEEPTLKHWEPEIPAPMSELTETVVCALGLSVGIVGIMVGTIFIIQGLRSGGTSRHPGPL
>gi|537240813|gb|ERE87065.1| h-2 class II histocompatibility antigen, E-K alpha chain-like protein [Cricetulus griseus]
MPAHLTLWHTPPCESVISSDPTEHQEENGHNWSPGVKTFLHGCPVEPPEVMGYQRVPNPAEEHTIIQAEFFLSPDEKGEF
MFDFDGDEIFHVDIRKSETIWRLEEFGQFASFEAQGALANIAVDKANLDIMIKRSNHTPDVNVSPEVTVLPNSPVSLGEP
NILICFIDKFSPPVVNVTWLRNGQPVTTGVSETVFLPREDHLFRKFYYLTFLPTTEDVYDCVVDHWGLEEPLLKHWEFEE
HTPLPETKENLVCALGLFVGIVGIIAGVVFIIKGMQKRNAAERRQGAL
>gi|296197813|ref|XP_002746429.1| PREDICTED: HLA class II histocompatibility antigen, DQ alpha 2 chain-like [Callithrix jacchus]
MILNKALMLGALVLTTVLTTVMSPCGGEDIVADHVASYGVNFYQSYGPSGQYTHEFDGDEEFYVDLETKETVWRLPVFST
FISFDPQSALRNMAVGRHTLEFMIKQSNSTAATNEVPEVTVFSKSPVVLGQPNTLICLVDNIFPPVVNITWLSNGHSVTD
GVSETSFLSKSDHSFFKISYLTFLPSADEIFDCEVEHWGLDEPLLKHWEPEIPAPLSELTETVVCTLGLSVGLMGIVVGT
VFIIKGLCSVDASRHQGPL
>gi|224343|prf||1102205B antigen HLA DRalpha
IIAVLMSAQESWAIKEEHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAVDK
ANLEIMTKRSNYTPITNVPPEVTVLTNSPVELREPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVSETVFLPREDHLFRK
FHYLPFLPSTEDVYDCRVEHGLDEPLLKHWEFDAPSPLPETTENVVCALGLTVGLVGIIIGTIFIIKGVRKSNAAERRGP
L
>gi|390196906|gb|AFL70548.1| MHC class II protein, partial [Macaca fascicularis] >gi|390196916|gb|AFL70553.1| MHC class II protein, partial [Macaca fascicularis] >gi|390196934|gb|AFL70562.1| MHC class II protein, partial [Macaca fascicularis] >gi|390196950|gb|AFL70570.1| MHC class II protein, partial [Macaca fascicularis] >gi|390196970|gb|AFL70580.1| MHC class II protein, partial [Macaca fascicularis] >gi|390196978|gb|AFL70584.1| MHC class II protein, partial [Macaca fascicularis]
GGEDIVADHVASCGVNLYQTYGLSGQYTHEFDGDEQFYVDLERKETAWRWPELSKFGGFDPQGALRNLAVSKHNLNIMTK
RYNSTAAINEVPEVTVFSKSPVTLGHPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSETSFLSKSDHSFFKISYLTFLP
SADEIYDCRVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVFIIQGLRSVGASR
>gi|199688|gb|AAA39705.1| MHC H2-w28-E alpha, partial [Mus caroli]
EHTIIQAEFYLLPDKRGEFMFDFDGDEIFHVDIEKSETIWRLEEFAKFASFEAQGALANIAVDKANLDVMKERSNNTPDA
NVAPEVTVLSRSPVNLGEPNILICFIDKFSPPVVNVTWLRNGRPVTEGVSETVFLPRDDHLFRKFHFLTFLPSTDDFYDC
EVDHWGLEEPLRKHWEFEEKTLLPETKENVVCALGLFVGLVGIVVGIILIMTGIKKRNVVERRQGAL
>gi|479336314|gb|AGJ74733.1| MHC class II antigen, partial [Macaca mulatta]
FYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMTKRSNNTPITNVPPEVTV
LTNSPVELGEPNVLICFIDKFSPPVVKVTWLKNGKPVTTGVSETVFLPREDHLFRKFHYLPFLPSTEDIYDCKVEHWGLD
APLLKHREFDAPSPLPETTENVVCALGLIVGLVGIIVGI
>gi|224179365|gb|ACN39186.1| MHC class II antigen, partial [Lepus europaeus]
DEQFYVDLDKKETIWRLPEFSRFASFDPQGALGNIATERYNLDIMIKRSNSTAAINEVPEVTVFSKAPVRLGQPNTLICL
VDNIFPPVINISWLINGHSVTEGVFETSFLSKSDHAFLKIVYLTFLPSADDIYDCRVEHWGLEKPLLRHWEPEIPAPMSE
LTETVVCALGLAVGLVGIIVGTILIIRGLRSSGASRQQGPL
>gi|521024121|gb|EPQ05909.1| HLA class II histocompatibility antigen, DQ alpha 2 chain [Myotis brandtii]
MTFATQFEHQELSAGTQMKRRAICPWRELRLAIGQHGAQSTATAGQDSGPSETETETDHVAAYGVCFSQSYSPSGQYTQE
FDGDEEFYVDLEKRETVWQQPMFSEVRGFDPQSGLREVNTARYNLDLLIKRSNSTAAINEVPEVTVFPKSPVELGQPNTL
ICAVDNIFPPVINISWLSNGHSVTQGVSETSFLPKRDHSFLKISYLTFLPSADDVYDCKVEHWGLDQPLLKHWEPEIPAP
MSELTETVVCALGLAVGLVGIVMGTVFIIQGLRPAGASRHQGPLTAPRLHLRTPHRTAPRLHLRTPHRTAPRLHLRTPHR
TAPRLHLRTPHRTAPRLHLRTPHRTAPRLHLRTPHRTAPRLHLRTPHRTAPRLYLSPEDPSQDCTPSTPEDPSQDCTPST
PEDPSQDCTPSTPEDPSQDCTPSTPEDPSQDCTPSTPEDPSQDCTPSTPEDPSQDCTPSTPEDPSQDCTPSTPEDPSQDC
TPSTPEDPSQDCTPSTPEDPSQDCTPSTPEDPSQDCTPSTPEDPSQDCTPSTPEDPSQDCTPSTPEDPSQDCTPSTPEDP
SQDCTPSTPEDPSQDCTPSTPEDPSQDCTPSTPEDPSQDCTPSTPEDPSQDCTPSTPEDPSQDCTPSTPEDPSQDCTPST
PEDPSQDCTPSTPEDPSQDCTPSTPEDPSQDCTPSTPEDPSQDCTPSTPEDPSQDCTPSTPEDPSQDCTPSTPEDPSQDC
TPSTPEDPSQDCTPSTPEDPSQDCTPSTPEDPSQDCTPSTPEDPSQDCTPSTPEDPSQDCTPSTPEGPLTGLHPIYTCVL
RAPHRTAPHLYLRASSQDCTPYTWVLRAPHRTGLS
>gi|199346|gb|AAA39582.1| MHC H2-1E-alpha (, partial [Mus musculus]
EHTIIQAEFYLLPDKRGEFMFDFDGDEIFHVDIEKSETIWRLEEFAKFASFEAQGALANIAVDKANLDVMKERSNNTPDA
NVAPEVTVLSRSPVNLGEPNILICFIDKFSPPVVNVTWLRNGRPVTTGVSETVFLPRDDHLFRKFHYLTFLPSTDDFYDC
EVDHWGLEEPLRKAWEFEEKTLLPETKENVMCALGLFVGLVGIVVGIILIMKGIKKRNVVERRQGAL
>gi|479336280|gb|AGJ74716.1| MHC class II antigen, partial [Macaca mulatta]
GEDIVADHVASCGVNLYQTYGLSGQYTHEFDGDEQFYVDLERKETAWRWPELSKFGGFDPQGALRNLAVSKHNLNIMTKR
YNSTAAINEVPEVTVFSKSPVTLGHPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSETSFLSKSDHSFFKISYLTFLPS
ADEIYDCRVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVFIIQGLRSVGAS
>gi|344245785|gb|EGW01889.1| hypothetical protein I79_024694 [Cricetulus griseus]
MFDFDGDEIFHVDIRKSETIWRLEEFGQFASFEAQGALANIAVDKANLDIMIKRSNHTPDVNVSPEVTVLPNSPVSLGEP
NILICFIDKFSPPVVNVTWLRNGQPVTTGVSETVFLPREDHLFRKFYYLTFLPTTEDVYDCVVDHWGLEEPLLKHWEFEE
HTPLPETKENLVCALGLFVGIVGIIAGVVFIIKGMQKRNAAERRQGAL
>gi|471839|gb|AAA36301.1| hla-dr antigen heavy chain (aa 3 at 60), partial [Homo sapiens]
VIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMTKRSNYTPITNV
PPEVTVLTNSPVELREPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVSETVFLPREDHLFRKFHYLPFLPSTEDVYDCRV
EHWGLDEPLLKHWEFDAPSPLPETTENVVCALGLTVGLVGIIIGTIFIIKGLRKSNAAERRGPL
>gi|344253009|gb|EGW09113.1| hypothetical protein I79_013190 [Cricetulus griseus]
MEFDDDELFYVDLDKKETIWRIPEFAQLRSFDPQGGLQEIAVAKYNLDILIKETNSTPAANEVPEVTVFPKSPVLLGQPN
VLICLVNNIFPPVINITWLRNSKSVTEGVYETSFLSNSDHSFHKMAYLTFIPSDDDIYDCRVEHWGLEEPALKHWEPEVP
APVSELPETVVCALGLSVGIVGIVVGTVFIIQGLRSGGPSRHPGPL
>gi|524976703|ref|XP_005088171.1| PREDICTED: h-2 class II histocompatibility antigen, E-U alpha chain-like [Mesocricetus auratus]
MAMTGALVLRLFFMAVLMGPQKSWAIKEEHTIIQAEFFLSPDEKGEYMFDFDGDEIFHVDIAKSETIWRLAEFGKFASFE
AQGALANIAVDKANLDIMIKRSNHTPDANVSPEVTVLPNSPVSLGEPNILICFVDKFSPPVVNVTWLRNGQPVTTGVSET
VFLPREDHLFRKFYYLTFLPTTEDVYDCVVDHWGLDEPLLKHWEFEEHTPLPETKENVVCALGLFVGVVGIIVGVVFIIK
GMKKRNAAERRRQGAL
>gi|521029649|gb|EPQ11436.1| Mamu class II histocompatibility antigen, DR alpha chain [Myotis brandtii]
MAIIGDPALGFFITVVLVCLQESWAIKEDHVIIQAEFYMKPDESGEFMFDFDGDEIFHVDMQKKETVWRLKEFGQFASFE
AQGALANIAVDKANLETMIKRSNHTPNSNEMTVFPNNPVELGEPNMLICFIDKFSPPVVNVTWFRNGKPVTTGVSETVFL
PREDHLFRKFYYLPFLPSNDDVYDCQVEHWGLDEPLIKHWEFEAQTPLPETTENVVCGLGLVVGLVGIIVGTVLIIKGMR
KGHAAERRGPL
>gi|68534388|gb|AAH99182.1| RT1-Ha protein [Rattus norvegicus]
MYAFDGDEQFYVDLDREETVWDLPEFSKVYAFDAQEALPYIDSLKNNLRALIQRYNVTQDPSEPPEVTVFPKNPVELGQP
NVLICHIDRLFPPVLNVTWLRNGQPVTEGTSETVFLASTELRFHKFHYLTFIPTAQDVYDCRVEHWSLDQPSLSHWEMQE
PVQVSETMETTVCALGLVVGLVGSVVGSALIVRAPHGGHNPRTQEPL
>gi|524977056|ref|XP_005088345.1| PREDICTED: HLA class II histocompatibility antigen, DO alpha chain-like, partial [Mesocricetus auratus]
MVLHVELVLASHALISLLSLQGVWAIKADHMGSYGPAFYQSYDASGQFTHEFDGEQIFSVDLKSGEVVWRLPGFGDTLYS
EFQSGLISIAMIRAHLDILVERSNRTRAVSVPPRVTVLPKSRVELGKPNVLICIVDDIFPPVINVTWLRNNQPVTKGVAQ
TSFYSQPNHRFRKFHYLTFVPSVEDVYDCRVEHWGLDAPLLRHWEPQVLTPPPDTTETLVCALGLALGFMGFLLGTVLII
TGTRPPSVSRSLVFRPPDSQQNLWGTVSSCPSALPAPESSRPLAAAA
>gi|507685839|ref|XP_004711787.1| PREDICTED: mamu class II histocompatibility antigen, DR alpha chain-like [Echinops telfairi]
MFDFDGDEIFHVDMGKKETVWRLKEFERFASFEAQGALANIAVDKANLDIMKKRSNNTPIVNVPPEVTVLLHDVVEAEQP
NILICFVDKFTPPVLKVTWLKNGAPVTTGVSETVFLPRDDHLFRKFFYLPFLPSAEDYYDCQVEHWGLDTPILKHWEFEA
PTPFPETTENVVCILGLVVGLVGIIVGSLLIIKGVRKGNAVERPRGPL
>gi|390196940|gb|AFL70565.1| MHC class II protein, partial [Macaca fascicularis] >gi|390196960|gb|AFL70575.1| MHC class II protein, partial [Macaca fascicularis]
GGEDIVADHVASCGVNLYQTYGLSGQYTHEFDGDERFYVDLERKETAWRWPELSKFGGFDPQGALRNLAVLKHTLNIVTK
RYNSTAATNEVPEVTVFSKSPVMLGQPNTLICLVDNIFPPVVNITWLSNGRSVTEGVSETSFLPKSDHSFFKISYLTFLP
SADEIYDCKVEHWGLDELLLKHREPEIPAPLSELTETVVRALGLSVGLVGIVVGTVLIIRGLRSVGASR
>gi|164237|gb|AAA30956.1| MHC class II DR-alpha, partial [Equus caballus]
DHVIIQAEFYLKPGDSGEFMFDFDGDEIFHVDMDKKETVWRLEEFGRFTSFEAQGALANIAVDKANLEIMMKRSNNTPNT
NVPPEVTVLPNKPVELGEPNVLICFVDKFSPPVIDVTWLKNGKPVTMGVSETVFLPRDDQLFRKFHYLPFLPSTEDVYDC
KVEHWGLDEPLLKHWEFEAPTPLSETTENVVCGLGLVVGLVGIIVGTIFIIKGVRKGNAVERRGPL
>gi|584450068|emb|CDM15104.1| MHC class II protein, partial [Macaca nemestrina]
ADHVASCGVNLYQTYGLSGQFTHEFDGDEQFYVDLRRKETAWRWPELSKFGGFDPQGALRNLAVLKHNLNIVTKRYNSTA
ATNEVPEVTVFSKSPVTLGHPNTLICLVDNIFPPVVNITWLSNGRSVTEGVSETSFLSKSDHSFFKISYLTFLPSADEIY
DCRVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVG
>gi|584450074|emb|CDM15107.1| MHC class II protein, partial [Macaca nemestrina]
DHVASCGVNLYQTYGLSGQYTHEFDGDERFYVDLERKETAWRWPELSKFGGFDPQGALRNLAVSKHNLNIMTKRYNSTAA
TNEVPEVTVFSKSPVMLGQPNTLICLVDNIFPPVVNITWLSNGRSVTEGVSETSFLSKSDHSFFKISYLTFLPSADEIYD
CRVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVG
>gi|521038994|gb|EPQ20770.1| HLA class II histocompatibility antigen, DQ alpha 2 chain, partial [Myotis brandtii]
ADHVGAYGECFSQSYGPSGQYTFEFDGDETFHVDLEKKETVWWLPGLSEFGSFDPQGGDAGTRRAELPRILTHCCFLTAE
VPEVTVFPKSPVELGQPNTLICALDNIFPPVINISWLSNGHSVMQGVSETNFLPKRDHSFLKISYLTFLPSADDVYDCKV
EHWGLDQPLLKHWEPEIPAPMSELTETVVCALGLAVGLVGIVTGTVFIIQGLRPGGASRHQGPL
>gi|584450072|emb|CDM15106.1| MHC class II protein, partial [Macaca nemestrina]
DHVASCGVNLYQTYGLSGQYTHEFDGDEQFYVDLERKETAWRWPELSKFGGFDPQGALRNLAVSKHNLNIMTKRYNSTAA
TNEVPEVTVFSKSPVTLGHPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSETSFLSKSDHSFFKISYLTFLPSADEIYD
CRVEHWGLDEPLLKHWEPEIPVPMSELTETVVCALGLSVGLVGIVVG
>gi|584450070|emb|CDM15105.1| MHC class II protein, partial [Macaca nemestrina]
ADHVASCGVNLYQTYGLSGQYTHEFDGDERFYVDLERKETAWRWPELSKFGGFDPQGALRNLAVSKHNLNIMTKRYNSTA
ATNEVPEVTVFSKSPVMLGQPNTLICLVDNIFPPVVNITWLSNGRSVTEGVSETSFLSKSDHSFFKISYLTFLPSADEIY
DCRVEQWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSVGLMGIVVG
>gi|625206722|ref|XP_007644580.1| PREDICTED: HLA class II histocompatibility antigen, DO alpha chain [Cricetulus griseus] >gi|625262936|ref|XP_007622899.1| PREDICTED: HLA class II histocompatibility antigen, DO alpha chain [Cricetulus griseus]
MVLPVELVLAFHTLISFLNPQGVRAIKADHMGSYGPAFYQSYDASGQFTHEFDGEQIFSVDLKNGEVVWRLPEFGDTQYS
NFQSGLASIAMIRAHLDILVERSNRTRAISVPPRVTVLPKSPVELGKPNVLICIVDDIFPPVINVTWLRNNQPVTKGVAQ
TSFYTQPNHRFRKFHYLTFVPWAEDMYDCRVEHWGLEAPLLQHWEPQVLTPPPDTTETLVCGLGLALGFMGFLLGTALIV
TGLSPRSIRR
>gi|589969251|ref|XP_006997110.1| PREDICTED: HLA class II histocompatibility antigen, DO alpha chain-like [Peromyscus maniculatus bairdii]
MVLRVELVLVLRTLITFLSPQGVRAIKADHMGSYGPAFYQSYDASGQFTHEFDGEQIFSVDLKSREVVWRLPEFGDFLYS
NFQSGLNSIAMIGAHLDVLVERSNRTRAISVPPRVTVLPKSRVELGKPNVLICMVEDIFPPVISITWLRNNQPVTKGVTQ
TSFYSQPNHRFRKFHYLTFVPSAEDVYDCRVEHWGLDAPLLRHWEPQVLTPPPDTTETLVCGLGLAVGFVGFLLGTVLII
TGNHSYKRTP
>gi|226438125|pdb|2WBJ|A Chain A, Tcr Complex >gi|226438127|pdb|2WBJ|E Chain E, Tcr Complex
IKEEHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMTKRSNYT
PITNVPPEVTVLTNSPVELREPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVSETVFLPREDHLFRKFHYLPFLPSTEDV
YDCRVEHWGLDEPLLKHWEFDAPSPLPETTENVD
>gi|66361095|pdb|1YMM|A Chain A, TcrHLA-Dr2bMBP-Peptide Complex
IKEEHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMTKRSNYT
PITNVPPEVTVLTNSPVELREPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVSETVFLPREDHLFRKFHYLPFLPSTEDV
YDCRVEHWGLDEPLLKHWEFDAPSPLPETTE
>gi|313754554|pdb|3PDO|A Chain A, Crystal Structure Of Hla-Dr1 With Clip102-120 >gi|313754567|pdb|3PGC|A Chain A, Crystal Structure Of Hla-Dr1 With Clip106-120, Flipped Peptide Orientation >gi|313754570|pdb|3PGC|D Chain D, Crystal Structure Of Hla-Dr1 With Clip106-120, Flipped Peptide Orientation >gi|313754573|pdb|3PGD|A Chain A, Crystal Structure Of Hla-Dr1 With Clip106-120, Canonical Peptide Orientation >gi|313754576|pdb|3PGD|D Chain D, Crystal Structure Of Hla-Dr1 With Clip106-120, Canonical Peptide Orientation >gi|399125055|pdb|4AH2|A Chain A, Hla-Dr1 With Covalently Linked Clip106-120 In Canonical Orientation
MIKEEHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMTKRSNY
TPITNVPPEVTVLTNSPVELREPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVSETVFLPREDHLFRKFHYLPFLPSTED
VYDCRVEHWGLDEPLLKHWEFDAPSPLPETTEN
>gi|556723598|ref|XP_005957617.1| PREDICTED: mamu class II histocompatibility antigen, DR alpha chain-like isoform X3 [Pantholops hodgsonii]
MAITRVPILGIFITVLISLQESWAIKEDHVIIQAEFYLNPEQSAEFMFDFDGDEIFHVDMQKKETVWRLPEFGHFASFEA
QGALANMAVMKANLDIMIKRSNNTPNTNVPPEVTLLPNKPVELGEPNTLICFIDKFSPPVISVTWLRNGKPVTDGVSQTV
FLPRDDHLFRKFHYLPFLPTTEDVYDCKVEHWGLNEPLLKHWGTIFIIKGVRKANTVEGRGPL
>gi|2914423|pdb|1AQD|A Chain A, Hla-Dr1 (Dra, Drb1 0101) Human Class Ii Histocompatibility Protein (Extracellular Domain) Complexed With Endogenous Peptide >gi|2914426|pdb|1AQD|D Chain D, Hla-Dr1 (Dra, Drb1 0101) Human Class Ii Histocompatibility Protein (Extracellular Domain) Complexed With Endogenous Peptide >gi|2914429|pdb|1AQD|G Chain G, Hla-Dr1 (Dra, Drb1 0101) Human Class Ii Histocompatibility Protein (Extracellular Domain) Complexed With Endogenous Peptide >gi|2914432|pdb|1AQD|J Chain J, Hla-Dr1 (Dra, Drb1 0101) Human Class Ii Histocompatibility Protein (Extracellular Domain) Complexed With Endogenous Peptide
IKEEHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMTKRSNYT
PITNVPPEVTVLTNSPVELREPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVSETVFLPREDHLFRKFHYLPFLPSTEDV
YDCRVEHWGLDEPLLKHWEFDAPSPLPETTEN
>gi|399125052|pdb|4AEN|A Chain A, Hla-Dr1 With Covalently Linked Clip106-120 In Reversed Orientation
GGGGSGGGGSGGGGSIKEEHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAV
DKANLEIMTKRSNYTPITNVPPEVTVLTNSPVELREPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVSETVFLPREDHLF
RKFHYLPFLPSTEDVYDCRVEHWGLDEPLLKHWEFDAPSPLPETTEN
>gi|440690958|pdb|4FQX|A Chain A, Crystal Structure Of Hla-Dm Bound To Hla-Dr1 >gi|442570744|pdb|4GBX|A Chain A, Crystal Structure Of An Immune Complex At Ph 6.5
IKEEHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIACDKANLEIMTKRSNYT
PITNVPPEVTVLTNSPVELREPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVSETVFLPREDHLFRKFHYLPFLPSTEDV
YDCRVEHWGLDEPLLKHWEFDAPSPLPETTE
>gi|3114308|pdb|1IAK|A Chain A, Histocompatibility Antigen I-Ak
EDDIEADHVGSYGITVYQSPGDIGQYTFEFDGDELFYVDLDKKETVWMLPEFAQLRRFEPQGGLQNIATGKHNLEILTKR
SNSTPATNEAPQATVFPKSPVLLGQPNTLICFVDNIFPPVINITWLRNSKSVTDGVYETSFFVNRDYSFHKLSYLTFIPS
DDDIYDCKVEHWGLEEPVLKHWEPEIPAPMSELTETVVC
>gi|339266153|gb|AEJ36200.1| MHC class II antigen [Ovis aries]
TVLISLQESWAIKEDHVIIQAEFYLNPEESAEFMFDFDGDEIFHVDMQKKETVWRLPEFGHFASFEAQGALANMAVMKAN
LDIMIKRSNNTPNTNVPPEVTLLPNKPVELGEPNTLICFIDKFSPPVISVTWLRNGIPVTDGVSQTVFLPRDDHLFRKFH
YLPFLPTTEDVYDCKVEHWGLNEPLLKHW
>gi|254554248|gb|ACT67489.1| MHC class II antigen, partial [Mastomys natalensis]
TVWRIPEFGQLLNFDPQGGLQNIAVLKHNLDNLIKRSNSTPATNEAPAATVFPKSPVLLGQPNTLICFVDNIFPPVINIT
WLRNSKPVTEGIAETSFLSNRDHPFQKMSYLTFVPSDDDIYDCKVEHWGLHEPVLKHWEPEIPAPMSELTETVVCALGLS
VGLIGIVVGTIFLTKGLRSGGTSRHPGPL
>gi|356707393|gb|AET36873.1| MHC class II antigen DQ alpha chain, partial [Meles meles]
TLALTTIMSLGGSEDIVADHVASYGISVYQSYGPSGQYTREFDGDEEFYVDLEKKETVWQLPMFQALRRFDPQGALRNLA
IAKQNLNILTKRSNYTAATNEVPEVTLFLKTPVMLGQPNTLICLVDNIFPPVINVTWLKNRHSVTEGVSETHFLIKKDYS
FLKFSYLTFLPSADDIYDCKVEHWGLDEPLLKHWEPEIPTPMSEL
>gi|165760943|pdb|2P24|A Chain A, I-AuMBP125-135
MAIMAPRTLVLLLSGALALTQTWAGSHSRGEDDIEADHVGSYGIVVYQSPGDIGQYTFEFDGDELFYVDLDKKETIWMLP
EFAQLRSFDPQGGLQNIATGKHNLGVLTKRSNSTPATNEAPQATVFPKSPVLLGQPNTLICFVDNIFPPVINITWLRNSK
SVADGVYETSFFVNRDYSFHKLSYLTFIPSDDDIYDCKVEHWGLEEPVLKHWEPEIPAPMSELTETSGSRLEVLFQ
>gi|339266151|gb|AEJ36199.1| MHC class II antigen [Ovis aries]
TVLISLQESWAIKEDHVIIQAEFYLNPEESAEFMFDFDGDEIFHVDMQKKETVWRLPEFGRFASFEAQGALANMAVMKAN
LDIMIKRSNNTPNTNVPPEVTLLPNKPVELGEPNTLICFTDKFSPPVISVTWLRNGIPVTDGVSQTVFLPRDDHLFRKFH
YLPFLPTTEDVYDCKVEHWGLNEPLLKHW
>gi|61316286|ref|NP_001012699.1| major histocompatibility complex, class II, DQ alpha 2 precursor [Bos taurus] >gi|2627164|dbj|BAA23525.1| MHC class II DQA2 (BoLA-DQA2) [Bos taurus]
MVLNRALILGALALTTMMSSSGGEDIVADHVGSYGTEIYQSHGPSGQYTQEFDGDEMFYVDLGKKETVWRLPMFSQFAGF
DPQAALSEIATAKHNLDVLTKRSNFTPVINEVPEVTVFSKSPVMLGQPNTLICHVDNIFPPVINITWLKNGHAVTEGVSE
TSFLPKDDHSFLKIGYLTFLPSDNDIYDCKVEHWGLDEPLLKHWGMYEFHPFRYSLFFYPIQNTLSFGPSISQSKACFPH
FKVSKIILHSLPKPGALSFCRINTTPPA
>gi|556723606|ref|XP_005957621.1| PREDICTED: SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like isoform X1 [Pantholops hodgsonii]
MVLNRALILGALALTTMMSPSGGEDIVADHVGSYGTTIYQSHGPSGQFTQEFDRDELFYVDLEKKETVWRLPMFSQFAGF
DPQGALSNIATVKHNLDIMTKWYNFTPVINEVPEVTVFSKSPVMLGQPNTLICHVDNIFPPVINITWLKNGHAVTEGVSE
TSFLPKDDDSFFRFGYLTFLPSDDDVYDCKVEHWGLDEPLLKHWGMYELHPCLYSLFFSQVQNTLSFGPSISQSKAGFPH
FKVSKIIETFILFPKPGALSFCNMNTTPPAQSHTQAHEPTLSIMTFITSLFQSLRFQPLCQS
>gi|1027489|dbj|BAA08767.1| MHC class II DQA2 [Bos taurus]
ALKLNRALILGALALTTMMSSSGGEDIVADHVGSYGTEIYQSHGPSGQYTQEFDGDEMFYVDLGKKETVWRLPMFSQFAG
FDPQAALSEIATAKHNLDVLTKRSNFTPVINEVPEVTVFSKSPVMLGQPNTLICHVDNIFPPVINITWLKNGHAVTEGVS
ETSFLPKDDHSFLKIGYLTFLPSDNDIYDCKVEHWGLDEPLLKHWGMYEFHPFRYSLFFYPIQNTLSFGPSISQSKACFP
HFKVSKIILHSLPKPGALSFCRINTTPPA
>gi|254554246|gb|ACT67488.1| MHC class II antigen, partial [Mastomys natalensis]
TVWRLPEFGQLTSFDPQGGLQNIATAKHNLDILTRRSNSTPATNEAPVATVFPKSPVLLGQPNTLICFVDNIFPPVISIT
WLRNSKPVTEGVYETSFLSNPDHSFHKMSYLTFIPSDDDIYDCKVEHWGLHEPVLKHWEPEIPAPMSELTETVVCALGLS
VGLVGIVVGTIFIIQGLRSGGTSRHPGPL
>gi|2627166|dbj|BAA23526.1| MHC class II DQA2 (BoLA-DQA2) [Bos taurus]
MNRALILGALALTTMMSSSGGEDIVADHVGSYGTEIYQSHGPSGQYTQEFDGDEMFYVDLGKKETVWRLPMFSQFAGFDP
QAALSEIATAKHNLDVLTKRSNFTPVINEVPEVTVFSKSPVMLGQPNTLICHVDNIFPPVINITWLKNGHAVTEGVSETS
FLPKDDHSFLKIGYLTFLPSDNDIYDCKVEHWGLDEPLLKHWGMYEFHPFRYSLFFYPIQNTLSFGPSISQSKACFPHFK
VSKIILHSLPKPGALSFCRINTTPPA
>gi|356707396|gb|AET36874.1| MHC class II antigen DQ alpha chain, partial [Meles meles]
TLALTTMMSPGGSEDIVADHVGAYGVEVYQSYGPSGQYTQEFDGDELFYVDLEKKETVWRLPVFSTFAGFDPQGALSEIA
TSKQNLNILTKRSNYTAATNEVPEVTLFPKSPVMLGQPNTLICLVDNIFPPVINVTWLKNRHSVTEGVSETSFLAKKDHS
FLKISYLTFLPSADDIYDCKVEHWGLDEPLLKHWEPEIPTPMSEL
>gi|563320740|pdb|4I5B|A Chain A, Structure Of Human Mhc Class Ii Protein Hla-dr1 Carrying An Influenza Hemagglutinin Peptide Partially Filling The Binding Groove >gi|563320743|pdb|4I5B|D Chain D, Structure Of Human Mhc Class Ii Protein Hla-dr1 Carrying An Influenza Hemagglutinin Peptide Partially Filling The Binding Groove
KEEHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIACDKANLEIMTKRSNYTP
ITNVPPEVTVLTNSPVELREPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVSETVFLPREDHLFRKFHYLPFLPSTEDVY
DCRVEHWGLDEPLLKHWEFDAPSPLPE
>gi|529003393|ref|XP_005223622.1| PREDICTED: major histocompatibility complex, class II, DQ alpha 5 isoform X1 [Bos taurus] >gi|148744827|gb|AAI42008.1| BOLA-DQA5 protein [Bos taurus]
MVLNRALILGTLALTTMMSPSGGEDIVADHVGIYGVNIYQSYGPSGQFTHEFDGDEQFYVDLEKKETVWKLPLFSRMLSF
DPQFALRNIAIMKLHVDFLTKFSNSTAATNKVPEVTVFSKSPVMLGQPNTLICHVDNIFPPVINITWLRNGHSVTEGVSE
TSFLIKSDYSFLKIKYLTFLPSDDDIYDCKVEHWGLDEPLLKHWGLTRTMPLML
>gi|145579682|pdb|2IPK|A Chain A, Crystal Structure Of The Mhc Class Ii Molecule Hla-Dr1 In Complex With The Fluorogenic Peptide, Acpkxvkqntlklat (X3- [5-(Dimethylamino)-1,3-Dioxo-1,3-Dihydro-2h-Isoindol-2-Yl]- L-Alanine) And The Superantigen, Sec3 Variant 3b2
MIKEEHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMTKRSNY
TPITNVPPEVTVLTNSPVELREPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVSETVFLPREDHLFRKFHYLPFLPSTED
VYDCRVEHWGLDEPLLKHWEFDA
>gi|14719559|pdb|1HXY|A Chain A, Crystal Structure Of Staphylococcal Enterotoxin H In Complex With Human Mhc Class Ii >gi|24987291|pdb|1H15|A Chain A, X-Ray Crystal Structure Of Hla-Dra10101DRB50101 Complexed With A Peptide From Epstein Barr Virus Dna Polymerase >gi|24987294|pdb|1H15|D Chain D, X-Ray Crystal Structure Of Hla-Dra10101DRB50101 Complexed With A Peptide From Epstein Barr Virus Dna Polymerase >gi|27573782|pdb|1LO5|A Chain A, Crystal Structure Of The D227a Variant Of Staphylococcal Enterotoxin A In Complex With Human Mhc Class Ii >gi|33357192|pdb|1JWM|A Chain A, Crystal Structure Of The Complex Of The Mhc Class Ii Molecule Hla-Dr1(Ha Peptide 306-318) With The Superantigen Sec3 >gi|33357196|pdb|1JWS|A Chain A, Crystal Structure Of The Complex Of The Mhc Class Ii Molecule Hla-Dr1 (Ha Peptide 306-318) With The Superantigen Sec3 Variant 3b1 >gi|33357200|pdb|1JWU|A Chain A, Crystal Structure Of The Complex Of The Mhc Class Ii Molecule Hla-Dr1 (Ha Peptide 306-318) With The Superantigen Sec3 Variant 3b2 >gi|40889344|pdb|1PYW|A Chain A, Human Class Ii Mhc Protein Hla-Dr1 Bound To A Designed Peptide Related To Influenza Virus Hemagglutinin, Fvkqna(Maa)al, In Complex With Staphylococcal Enterotoxin C3 Variant 3b2 (Sec3-3b2) >gi|112490704|pdb|2G9H|A Chain A, Crystal Structure Of Staphylococcal Enterotoxin I (Sei) In Complex With A Human Mhc Class Ii Molecule >gi|145579577|pdb|2IAM|A Chain A, Structural Basis For Recognition Of Mutant Self By A Tumor- Specific, Mhc Class Ii-Restricted Tcr >gi|145579582|pdb|2IAN|A Chain A, Structural Basis For Recognition Of Mutant Self By A Tumor- Specific, Mhc Class Ii-Restricted Tcr >gi|145579587|pdb|2IAN|F Chain F, Structural Basis For Recognition Of Mutant Self By A Tumor- Specific, Mhc Class Ii-Restricted Tcr >gi|145579592|pdb|2IAN|K Chain K, Structural Basis For Recognition Of Mutant Self By A Tumor- Specific, Mhc Class Ii-Restricted Tcr >gi|145579597|pdb|2IAN|P Chain P, Structural Basis For Recognition Of Mutant Self By A Tumor- Specific, Mhc Class Ii-Restricted Tcr >gi|157835837|pdb|2Q6W|A Chain A, The Structure Of Hla-Dra, Drb30101 (Dr52a) With Bound Platelet Integrin Peptide Associated With Fetal And Neonatal Alloimmune Thrombocytopenia >gi|157835840|pdb|2Q6W|D Chain D, The Structure Of Hla-Dra, Drb30101 (Dr52a) With Bound Platelet Integrin Peptide Associated With Fetal And Neonatal Alloimmune Thrombocytopenia >gi|312597111|pdb|2XN9|D Chain D, Crystal Structure Of The Ternary Complex Between Human T Cell Receptor, Staphylococcal Enterotoxin H And Human Major Histocompatibility Complex Class Ii >gi|325053919|pdb|3O6F|A Chain A, Crystal Structure Of A Human Autoimmune Tcr Ms2-3c8 Bound To Mhc Class Ii Self-Ligand MbpHLA-Dr4 >gi|325053923|pdb|3O6F|E Chain E, Crystal Structure Of A Human Autoimmune Tcr Ms2-3c8 Bound To Mhc Class Ii Self-Ligand MbpHLA-Dr4 >gi|357380560|pdb|3QXA|A Chain A, Hla-Dr1 Bound With Clip Peptide >gi|357380562|pdb|3QXA|D Chain D, Hla-Dr1 Bound With Clip Peptide >gi|379318356|pdb|3T0E|A Chain A, Crystal Structure Of A Complete Ternary Complex Of T Cell Receptor, Peptide-Mhc And Cd4 >gi|402550369|pdb|4E41|A Chain A, Structural Basis For The Recognition Of Mutant Self By A Tumor- Specific, Mhc Class Ii-Restricted T Cell Receptor G4 >gi|402550374|pdb|4E41|F Chain F, Structural Basis For The Recognition Of Mutant Self By A Tumor- Specific, Mhc Class Ii-Restricted T Cell Receptor G4 >gi|551701847|pdb|4IS6|A Chain A, Crystal Structure Of Hla-dr4 Bound To Gp100 Peptide >gi|665764521|pdb|4OV5|A Chain A, Structure Of Hla-dr1 With A Bound Peptide With Non-optimal Alanine In The P1 Pocket >gi|665764523|pdb|4OV5|D Chain D, Structure Of Hla-dr1 With A Bound Peptide With Non-optimal Alanine In The P1 Pocket >gi|665764525|pdb|4OV5|G Chain G, Structure Of Hla-dr1 With A Bound Peptide With Non-optimal Alanine In The P1 Pocket >gi|665764527|pdb|4OV5|J Chain J, Structure Of Hla-dr1 With A Bound Peptide With Non-optimal Alanine In The P1 Pocket >gi|665764529|pdb|4OV5|M Chain M, Structure Of Hla-dr1 With A Bound Peptide With Non-optimal Alanine In The P1 Pocket >gi|665764531|pdb|4OV5|P Chain P, Structure Of Hla-dr1 With A Bound Peptide With Non-optimal Alanine In The P1 Pocket >gi|667484725|pdb|4C56|D Chain D, X-ray Structure Of The Complex Between Staphylococcal Enterotoxin B, T Cell Receptor And Major Histocompatibility Complex Class Ii >gi|667484726|pdb|4C56|J Chain J, X-ray Structure Of The Complex Between Staphylococcal Enterotoxin B, T Cell Receptor And Major Histocompatibility Complex Class Ii
IKEEHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMTKRSNYT
PITNVPPEVTVLTNSPVELREPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVSETVFLPREDHLFRKFHYLPFLPSTEDV
YDCRVEHWGLDEPLLKHWEFDA
>gi|1633341|pdb|1SEB|A Chain A, Complex Of The Human Mhc Class Ii Glycoprotein Hla-Dr1 And The Bacterial Superantigen Seb >gi|1633345|pdb|1SEB|E Chain E, Complex Of The Human Mhc Class Ii Glycoprotein Hla-Dr1 And The Bacterial Superantigen Seb >gi|2914203|pdb|2SEB|A Chain A, X-Ray Crystal Structure Of Hla-Dr4 Complexed With A Peptide From Human Collagen Ii >gi|9256850|pdb|1D5M|A Chain A, X-Ray Crystal Structure Of Hla-Dr4 Complexed With Peptide And Seb >gi|9256918|pdb|1D5X|A Chain A, X-ray Crystal Structure Of Hla-dr4 Complexed With Dipeptide Mimetic And Seb >gi|9256921|pdb|1D5Z|A Chain A, X-Ray Crystal Structure Of Hla-Dr4 Complexed With Peptidomimetic And Seb >gi|9256924|pdb|1D6E|A Chain A, Crystal Structure Of Hla-Dr4 Complex With Peptidomimetic And Seb >gi|10835542|pdb|1FV1|A Chain A, Structural Basis For The Binding Of An Immunodominant Peptide From Myelin Basic Protein In Different Registers By Two Hla-Dr2 Alleles >gi|10835545|pdb|1FV1|D Chain D, Structural Basis For The Binding Of An Immunodominant Peptide From Myelin Basic Protein In Different Registers By Two Hla-Dr2 Alleles >gi|11513889|pdb|1FYT|A Chain A, Crystal Structure Of A Complex Of A Human AlphaBETA-T Cell Receptor, Influenza Ha Antigen Peptide, And Mhc Class Ii Molecule, Hla-Dr1 >gi|12084141|pdb|1HQR|A Chain A, Crystal Structure Of A Superantigen Bound To The High- Affinity, Zinc-Dependent Site On Mhc Class Ii >gi|20150365|pdb|1J8H|A Chain A, Crystal Structure Of A Complex Of A Human AlphaBETA-T Cell Receptor, Influenza Ha Antigen Peptide, And Mhc Class Ii Molecule, Hla-Dr4 >gi|82407587|pdb|1ZGL|A Chain A, Crystal Structure Of 3a6 Tcr Bound To MbpHLA-Dr2a >gi|82407592|pdb|1ZGL|D Chain D, Crystal Structure Of 3a6 Tcr Bound To MbpHLA-Dr2a >gi|82407597|pdb|1ZGL|G Chain G, Crystal Structure Of 3a6 Tcr Bound To MbpHLA-Dr2a >gi|82407602|pdb|1ZGL|J Chain J, Crystal Structure Of 3a6 Tcr Bound To MbpHLA-Dr2a >gi|195927397|pdb|3C5J|A Chain A, Crystal Structure Of Hla Dr52c
IKEEHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMTKRSNYT
PITNVPPEVTVLTNSPVELREPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVSETVFLPREDHLFRKFHYLPFLPSTEDV
YDCRVEHWGLDEPLLKHWEFD
>gi|560189068|pdb|4MCY|A Chain A, Immune Receptor >gi|563320920|pdb|4MCZ|A Chain A, Immune Receptor >gi|563320923|pdb|4MD0|A Chain A, Immune Receptor >gi|563320926|pdb|4MD4|A Chain A, Immune Receptor >gi|563320929|pdb|4MD5|A Chain A, Immune Receptor >gi|563320932|pdb|4MDI|A Chain A, Immune Receptor >gi|563320935|pdb|4MDJ|A Chain A, Immune Receptor
IKEEHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMTKRSNYT
PITNVPPEVTVLTNSPVELREPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVSETVFLPREDHLFRKFHYLPFLPSTEDV
YDCRVEHWGLDEPLLKHWEFDTSGDDDDK
>gi|23200340|pdb|1LNU|A Chain A, Crystal Structure Of Class Ii Mhc Molecule Iab Bound To Ealpha3k Peptide >gi|23200342|pdb|1LNU|C Chain C, Crystal Structure Of Class Ii Mhc Molecule Iab Bound To Ealpha3k Peptide >gi|23200344|pdb|1LNU|E Chain E, Crystal Structure Of Class Ii Mhc Molecule Iab Bound To Ealpha3k Peptide >gi|23200346|pdb|1LNU|G Chain G, Crystal Structure Of Class Ii Mhc Molecule Iab Bound To Ealpha3k Peptide >gi|186973020|pdb|3C5Z|C Chain C, Crystal Structure Of Mouse Mhc Class Ii I-Ab3K PEPTIDE COMPLEXED WITH Mouse Tcr B3k506 >gi|186973024|pdb|3C5Z|G Chain G, Crystal Structure Of Mouse Mhc Class Ii I-Ab3K PEPTIDE COMPLEXED WITH Mouse Tcr B3k506 >gi|186973028|pdb|3C60|C Chain C, Crystal Structure Of Mouse Mhc Class Ii I-Ab3K PEPTIDE Complexed With Mouse Tcr Yae62 >gi|186973032|pdb|3C60|G Chain G, Crystal Structure Of Mouse Mhc Class Ii I-Ab3K PEPTIDE Complexed With Mouse Tcr Yae62 >gi|186973036|pdb|3C6L|C Chain C, Crystal Structure Of Mouse Mhc Class Ii I-Ab3K PEPTIDE Complexed With Mouse Tcr 2w20 >gi|186973040|pdb|3C6L|G Chain G, Crystal Structure Of Mouse Mhc Class Ii I-Ab3K PEPTIDE Complexed With Mouse Tcr 2w20 >gi|359545802|pdb|3RDT|C Chain C, Crystal Structure Of 809.B5 Tcr Complexed With Mhc Class Ii I-Ab3K Peptide >gi|641390141|pdb|4P5T|C Chain C, 14.c6 Tcr Complexed With Mhc Class Ii I-ab/3k Peptide >gi|641390145|pdb|4P5T|G Chain G, 14.c6 Tcr Complexed With Mhc Class Ii I-ab/3k Peptide
IEADHVGTYGISVYQSPGDIGQYTFEFDGDELFYVDLDKKETVWMLPEFGQLASFDPQGGLQNIAVVKHNLGVLTKRSNS
TPATNEAPQATVFPKSPVLLGQPNTLICFVDNIFPPVINITWLRNSKSVADGVYETSFFVNRDYSFHKLSYLTFIPSDDD
IYDCKVEHWGLEEPVLKHWEPE
>gi|636666526|pdb|4P2O|A Chain A, Crystal Structure Of The 2b4 Tcr In Complex With 2a/i-ek >gi|636666531|pdb|4P2Q|A Chain A, Crystal Structure Of The 5cc7 Tcr In Complex With 5c2/i-ek >gi|636666536|pdb|4P2Q|F Chain F, Crystal Structure Of The 5cc7 Tcr In Complex With 5c2/i-ek >gi|636666541|pdb|4P2Q|K Chain K, Crystal Structure Of The 5cc7 Tcr In Complex With 5c2/i-ek >gi|636666546|pdb|4P2Q|P Chain P, Crystal Structure Of The 5cc7 Tcr In Complex With 5c2/i-ek >gi|636666551|pdb|4P2R|A Chain A, Crystal Structure Of The 5cc7 Tcr In Complex With 5c1/i-ek >gi|636666556|pdb|4P2R|F Chain F, Crystal Structure Of The 5cc7 Tcr In Complex With 5c1/i-ek >gi|636666561|pdb|4P2R|K Chain K, Crystal Structure Of The 5cc7 Tcr In Complex With 5c1/i-ek >gi|636666566|pdb|4P2R|P Chain P, Crystal Structure Of The 5cc7 Tcr In Complex With 5c1/i-ek
ADPIKEEHTIIQAEFYLLPDKRGEFMFDFDGDEIFHVDIEKSETIWRLEEFAKFASFEAQGALANIAVDKANLDVMKERS
NNTPDANVAPEVTVLSRSPVNLGEPNILICFIDKFSPPVVNVTWLRNGRPVTEGVSETVFLPRDDHLFRKFHYLTFLPST
DDFYDCEVDHWGLEEPLRKHWEFEEKTLLPETKESRGGLEVLFQ
>gi|28948667|pdb|1MUJ|A Chain A, Crystal Structure Of Murine Class Ii Mhc I-Ab In Complex With A Human Clip Peptide
EDDIEADHVGTYGISVYQSPGDIGQYTFEFDGDELFYVDLDKKETVWMLPEFGQLASFDPQGGLQNIAVVKHNLGVLTKR
SNSTPATNEAPQATVFPKSPVLLGQPNTLICFVDNIFPPVINITWLRNSKSVADGVYETSFFVNRDYSFHKLSYLTFIPS
DDDIYDCKVEHWGLEEPVLKHWSSADLVPR
>gi|330689603|pdb|3QIB|A Chain A, Crystal Structure Of The 2b4 Tcr In Complex With MccI-Ek
IKEEHTIIQAEFYLLPDKRGEFMFDFDGDEIFHVDIEKSETIWRLEEFAKFASFEAQGALANIAVDKANLDVMKERSNNT
PDANVAPEVTVLSRSPVNLGEPNILICFIDKFSPPVVNVTWLRNGRPVTEGVSETVFLPRDDHLFRKFHYLTFLPSTDDF
YDCEVDHWGLEEPLRKHWEFEEKTLLPETKESR
>gi|52695640|pdb|1T5X|A Chain A, Hla-Dr1 In Complex With A Synthetic Peptide (Aaysdqatplllspr) And The Superantigen Sec3-3b2
KEEHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMTKRSNYTP
ITNVPPEVTVLTNSPVELREPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVSETVFLPREDHLFRKFHYLPFLPSTEDVY
DCRVEHWGLDEPLLKHWEFDA
>gi|425684888|pdb|1UVQ|A Chain A, Crystal Structure Of Hla-Dq0602 In Complex With A Hypocretin Peptide
EDIVADHVASCGVNLYQFYGPSGQYTHEFDGDEQFYVDLERKETAWRWPEFSKFGGFDPQGALRNMAVAKHNLNIMIKRY
NSTAATNEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGQSVTEGVSETSFLSKSDHSFFKISYLTFLPSA
DEIYDCKVEHWGLDQPLLKHWEPEIPAPMSELTETVD
>gi|295982366|pdb|3L6F|A Chain A, Structure Of Mhc Class Ii Molecule Hla-Dr1 Complexed With Phosphopeptide Mart-1 >gi|347447572|pdb|3S4S|A Chain A, Crystal Structure Of Cd4 Mutant Bound To Hla-Dr1 >gi|347447576|pdb|3S4S|D Chain D, Crystal Structure Of Cd4 Mutant Bound To Hla-Dr1 >gi|347447580|pdb|3S5L|A Chain A, Crystal Structure Of Cd4 Mutant Bound To Hla-Dr1 >gi|347447581|pdb|3S5L|D Chain D, Crystal Structure Of Cd4 Mutant Bound To Hla-Dr1
IKEEHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMTKRSNYT
PITNVPPEVTVLTNSPVELREPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVSETVFLPREDHLFRKFHYLPFLPSTEDV
YDCRVEHWGLDEPLLKQWEFDA
>gi|6729997|pdb|1BX2|A Chain A, Crystal Structure Of Hla-Dr2 (Dra0101,Drb11501) Complexed With A Peptide From Human Myelin Basic Protein >gi|6730000|pdb|1BX2|D Chain D, Crystal Structure Of Hla-Dr2 (Dra0101,Drb11501) Complexed With A Peptide From Human Myelin Basic Protein >gi|52695634|pdb|1T5W|A Chain A, Hla-Dr1 In Complex With A Synthetic Peptide (Aaysdqatplllspr) >gi|52695637|pdb|1T5W|D Chain D, Hla-Dr1 In Complex With A Synthetic Peptide (Aaysdqatplllspr)
KEEHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMTKRSNYTP
ITNVPPEVTVLTNSPVELREPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVSETVFLPREDHLFRKFHYLPFLPSTEDVY
DCRVEHWGLDEPLLKHWEFD
>gi|14719666|pdb|1I3R|A Chain A, Crystal Structure Of A Mutant Iek Class Ii Mhc Molecule >gi|14719668|pdb|1I3R|C Chain C, Crystal Structure Of A Mutant Iek Class Ii Mhc Molecule >gi|14719670|pdb|1I3R|E Chain E, Crystal Structure Of A Mutant Iek Class Ii Mhc Molecule >gi|14719672|pdb|1I3R|G Chain G, Crystal Structure Of A Mutant Iek Class Ii Mhc Molecule
IKEEHTIIQAQFYLLPDKRGEFMFDFDGDEIFHVDIEKSETIWRLEEFAKFASFEAQGALANIAVNKANLDVMKERSNNT
PDANVAPEVTVLSRSPVNLGEPNILICFIDKFSPPVVNVTWLRNGRPVTEGVSETVFLPRDDHLFRKFHYLTFLPSTDDF
YDCEVDHWGLEEPLRKHWEFEEKTLLPETKEN
>gi|13399454|pdb|1FNE|A Chain A, Histocompatibility Antigen >gi|13399456|pdb|1FNE|C Chain C, Histocompatibility Antigen >gi|13399458|pdb|1FNG|A Chain A, Histocompatibility Antigen >gi|13399460|pdb|1FNG|C Chain C, Histocompatibility Antigen >gi|330689613|pdb|3QIW|A Chain A, Crystal Structure Of The 226 Tcr In Complex With Mcc-P5eI-Ek
IKEEHTIIQAEFYLLPDKRGEFMFDFDGDEIFHVDIEKSETIWRLEEFAKFASFEAQGALANIAVDKANLDVMKERSNNT
PDANVAPEVTVLSRSPVNLGEPNILICFIDKFSPPVVNVTWLRNGRPVTEGVSETVFLPRDDHLFRKFHYLTFLPSTDDF
YDCEVDHWGLEEPLRKHWEFEEKTLLPETKEN
>gi|641390131|pdb|4P23|C Chain C, J809.b5 Tcr Bound To Iab/3k >gi|641390133|pdb|4P46|C Chain C, J809.b5 Y31a Tcr Bound To Iab3k
IEADHVGTYGISVYQSPGDIGQYTFEFDGDELFYVDLDKKETVWMLPEFGQLASFDPQGGLQNIAVVKHNLGVLTKRSNS
TPATNEAPQATVFPKSPVLLGQPNTLICFVDNIFPPVINITWLRNSKSVADGVYETSFFVNRDYSFHKLSYLTFIPSDDD
IYDCKVEHWGLEEPVLKHW
>gi|357380566|pdb|3QXD|A Chain A, F54c Hla-Dr1 Bound With Clip Peptide >gi|357380568|pdb|3QXD|D Chain D, F54c Hla-Dr1 Bound With Clip Peptide
IKEEHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASCEAQGALANIAVDKANLEIMTKRSNYT
PITNVPPEVTVLTNSPVELREPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVSETVFLPREDHLFRKFHYLPFLPSTEDV
YDCRVEHWGLDEPLLKHWEFDA
>gi|22219045|pdb|1KLG|A Chain A, Crystal Structure Of Hla-Dr1TPI(23-37, Thr28-->ile Mutant) Complexed With Staphylococcal Enterotoxin C3 Variant 3b2 (Sec3-3b2)
EHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMTKRSNYTPIT
NVPPEVTVLTNSPVELREPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVSETVFLPREDHLFRKFHYLPFLPSTEDVYDC
RVEHWGLDEPLLKHWEF
>gi|22219050|pdb|1KLU|A Chain A, Crystal Structure Of Hla-Dr1TPI(23-37) Complexed With Staphylococcal Enterotoxin C3 Variant 3b2 (Sec3-3b2)
EHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMTKRSNYTPIT
NVPPEVTVLTNSPVELREPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVSETVFLPREDHLFRKFHYLPFLPSTEDVYDC
RVEHWGLDEPLLKHWEFDA
>gi|414145794|pdb|4H1L|A Chain A, Tcr Interaction With Peptide Mimics Of Nickel Offers Structural Insights In Nickel Contact Allergy >gi|414145797|pdb|4H1L|D Chain D, Tcr Interaction With Peptide Mimics Of Nickel Offers Structural Insights In Nickel Contact Allergy
EEHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMTKRSNYTPI
TNVPPEVTVLTNSPVELREPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVSETVFLPREDHLFRKFHYLPFLPSTEDVYD
CRVEHWGLDEPLLKHWEF
>gi|550544444|pdb|4H26|A Chain A, Tcr Interaction With Peptide Mimics Of Nickel Offers Structure Insight To Nickel Contact Allergy >gi|550544447|pdb|4H26|D Chain D, Tcr Interaction With Peptide Mimics Of Nickel Offers Structure Insight To Nickel Contact Allergy
EEHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMTKRSNYTPI
TNVPPEVTVLTNSPVELREPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVSETVFLPREDHLFRKFHYLPFLPSTEDVYD
CRVEHWGLDEPLLKHWEFD
>gi|576090|pdb|1DLH|A Chain A, Crystal Structure Of The Human Class Ii Mhc Protein Hla-dr1 Complexed With An Influenza Virus Peptide >gi|576093|pdb|1DLH|D Chain D, Crystal Structure Of The Human Class Ii Mhc Protein Hla-dr1 Complexed With An Influenza Virus Peptide >gi|20150768|pdb|1KG0|A Chain A, Structure Of The Epstein-Barr Virus Gp42 Protein Bound To The Mhc Class Ii Receptor Hla-Dr1 >gi|52695505|pdb|1SJE|A Chain A, Hla-Dr1 Complexed With A 16 Residue Hiv Capsid Peptide Bound In A Hairpin Conformation >gi|52695509|pdb|1SJH|A Chain A, Hla-Dr1 Complexed With A 13 Residue Hiv Capsid Peptide >gi|550544438|pdb|4H25|A Chain A, Tcr Interaction With Peptide Mimics Of Nickel Offers Structure Insights To Nickel Contact Allergy >gi|550544441|pdb|4H25|D Chain D, Tcr Interaction With Peptide Mimics Of Nickel Offers Structure Insights To Nickel Contact Allergy
EEHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMTKRSNYTPI
TNVPPEVTVLTNSPVELREPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVSETVFLPREDHLFRKFHYLPFLPSTEDVYD
CRVEHWGLDEPLLKHWEFDA
>gi|3212400|pdb|1A6A|A Chain A, The Structure Of An Intermediate In Class Ii Mhc Maturation: Clip Bound To Hla-dr3
HVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMTKRSNYTPITN
VPPEVTVLTNSPVELREPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVSETVFLPREDHLFRKFHYLPFLPSTEDVYDCR
VEHWGLDEPLLKHWEF
>gi|339266083|gb|AEJ36165.1| MHC class II antigen [Ovis aries]
IGIYGADFYQSHGPSGQYIHEFDGDEQFYVDLEKKETVWRLPMFGELTSFDPQGALSEIATSKQNLDIMIKRSNFTPVIN
EVPEVTVFSKSPVMLGQPNTLICHVDNIFPPVINITWLRNGHFVTEGVSETSFLPKSDYSFLKIGYLTFLPSDDDVYDCK
VEHWGLDEPLLKHWEP
>gi|28948426|pdb|1K2D|A Chain A, Crystal Structure Of The Autoimmune Mhc Class Ii I-Au Complexed With Myelin Basic Protein 1-11 At 2.2a
HSRGEDDIEADHVGSYGIVVYQSPGDIGQYTFEFDGDELFYVDLDKKETIWMLPEFAQLRSFDPQGGLQNIATGKHNLGV
LTKRSNSTPATNEAPQATVFPKSPVLLGQPNTLICFVDNIFPPVINITWLRNSKSVADGVYETSFFVNRDYSFHKLSYLT
FIPSDDDIYDCKVEHWGLEEPVLKHWEPE
>gi|339266043|gb|AEJ36145.1| MHC class II antigen [Ovis aries]
VGTYGTDFYQSHGPSGEYIHEFDGDELFYVDLGKKETVWRLPMFGELTSFDPQGALSNIAIAKHNLNILTKRYNFTPVIN
EVPEVTVFSKSPVMLGQPNTLICHVDKIFPPVINITWLWNGHAVTEHVSETSFLLRSDYSYLKISYLTFLPSDDDVYDCK
VEHWGLDEPLLKHWEP
>gi|1668693|dbj|BAA08766.1| MHC class II DQA2 [Bos taurus]
MFSQFAGFDPQAALSEIATAKHNLDVLTKRSNFTPVINEVPEVTVFSKSPVMLGQPNTLICHVDNIFPPVINITWLKNGH
AVTEGVSETSFLPKDDHSFLKIGYLTFLPSDNDIYDCKVEHWGLDEPLLKHWEPEVPAPMSELTETVVCALGLTVGLVGI
VVGTIFIIQGLRSGGASRHQGPL
>gi|46015754|pdb|1S9V|A Chain A, Crystal Structure Of Hla-Dq2 Complexed With Deamidated Gliadin Peptide >gi|46015757|pdb|1S9V|D Chain D, Crystal Structure Of Hla-Dq2 Complexed With Deamidated Gliadin Peptide
EDIVADHVASYGVNLYQSYGPSGQYTHEFDGDEQFYVDLGRKETVWCLPVLRQFRFDPQFALTNIAVLKHNLNSLIKRSN
STAATNEVPEVTVFSKSPVTLGQPNILICLVDNIFPPVVNITWLSNGHSVTEGVSETSFLSKSDHSFFKISYLTLLPSAE
ESYDCKVEHWGLDKPLLKHWEPEIPAPMSELTE
>gi|32140447|gb|AAP69829.1| MHC class II antigen E alpha [Mus musculus]
KRNTIIQAEFYLLPDKRGEFMFDFDGDEIFHVDIEKSETIWRLEEFAKFASFEAQGALANIAVDKANLDVMKERSNNTPD
ANVAPEVTVLSRSPVNLGEPNILICFIDKFSPPVVNVTWLRNGRPVTEGVSETVFLPRDDHLFRKFHYLTFLPSTDDFYD
CEVDHWGLEEPLRKHWEFEEKTLLPETKENVV
>gi|556754994|ref|XP_005972858.1| PREDICTED: HLA class II histocompatibility antigen, DO alpha chain-like [Pantholops hodgsonii]
MRADTFSFLPLTLNSPNTADHMGSYGPAFYQSYDGAGQFTYDFDGEQLFSVDLKKREAVWRLPEFGNFAYFDPQNGLVSI
AMIKAHLEVLVERSNGTRAPNVPPRVAVLPKSRVQLGEPNVLICIVDNIFPPVINVTWLRNGQPVTQGVTQTSFYAQPDH
SFRKFHYLTFVPLADDFYDCKVEHWGLDQPLFQHWEPQVPTVLPDTTGTLVCALGLVLGLGGFLGGITLIITGTCLSSAP
R
>gi|32140445|gb|AAP69828.1| MHC class II antigen E alpha [Mus musculus] >gi|32140449|gb|AAP69830.1| MHC class II antigen E alpha [Mus musculus]
KRNTIIQAEFYLLPDKRGEFMFDFDGDEIFHVDIEKSETIWRLEEFAKFASFEAQGALANIAVDKANLDVMKERSNNTPD
ANVAPEVTVLSRSPVNLGEPNILICFIDKFSPPVVNVTWLRNGRPVTEGVSETVFLPRDDHLFRKFHYLTFLPSTDDFYD
CEVDHWGLEEPLRKHWEFEEKTLLPETKENV
>gi|315364705|pdb|3PL6|A Chain A, Structure Of Autoimmune Tcr Hy.1b11 In Complex With Hla-Dq1 And Mbp 85-99
EDIVADHVASCGVNLYQFYGPSGQYTHEFDGDEQFYVDLERKETAWRWPEFSKFGGFDPQGALRNMAVAKHNLNIMIKRY
NSTAATNEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGQSVTEGVSETSFLSKSDHSFFKISYLTFLPSA
DEIYDCKVEHWGLDQPLLKHWEPEIPAPMSELTE
>gi|211925560|dbj|BAG82003.1| MHC class II antigen DR alpha chain [Macaca fascicularis] >gi|211925562|dbj|BAG82004.1| MHC class II antigen DR alpha chain [Macaca fascicularis] >gi|211925606|dbj|BAG82026.1| MHC class II antigen DR alpha chain [Macaca fascicularis] >gi|211925616|dbj|BAG82031.1| MHC class II antigen DR alpha chain [Macaca fascicularis]
DHVIIQAEFYLNPDQSGEYMFDFDGDELFHVDMAKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMTKRSNNTPIT
NVPPEVTVLTNSPVELGEPNVLICFIDKFSPPVVKVTWLKNGKPVTTGVSETVFLPREDHLFRKFHYLPFLPSTEDIYDC
KVEHWGLDAPLLKHW
>gi|339266155|gb|AEJ36201.1| MHC class II antigen [Ovis aries]
TVLISLQESWAIKEDHMIIQAGIYVNPEQSAEFMFDFDGDEIFHVDMQKKETVWRLPEFGHFASFEAQGALANMAVMKAN
LDVMTKYSNNTPNTNVPPEVTLLPNKPVELGEPNTLICFIDKFSPPVISVTWLRNGKPVTDGVSQTVFLPRDDHLFRKFH
YLSFLPTTEDVYDCKVEHCSLNEPLLKHW
>gi|562873415|ref|XP_006164608.1| PREDICTED: HLA class II histocompatibility antigen, DP alpha 1 chain-like [Tupaia chinensis]
MFQTKAVMLSALSLAYLLSLQGAGAIQVDHVSTYLTFTQTHRPSGEFMFQFDGDEMFYVDQDKRETIWSLEEFGRVYSYE
VQGGLQNLAVAKGNLNTLMQCSNHTQASNEPPEVTVFPKKSVELGQPNTLICHVDKFFPPVLNVTWLRNGQPVTDGVTEG
NPCIAL
>gi|47168716|pdb|1R5I|A Chain A, Crystal Structure Of The Mam-Mhc Complex >gi|47168720|pdb|1R5I|E Chain E, Crystal Structure Of The Mam-Mhc Complex
IKEEHVIIQAEFYLNPDQSGEFXFDFDGDEIFHVDXAKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIXTKRSNYT
PITNVPPEVTVLTNSPVELREPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVSETVFLPREDHLFRKFHYLPFLPSTEDV
YDCRVEHWGLDEPLLKHWEFD
>gi|2392362|pdb|1IEA|A Chain A, Histocompatibility Antigen >gi|2392364|pdb|1IEA|C Chain C, Histocompatibility Antigen >gi|2392366|pdb|1IEB|A Chain A, Histocompatibility Antigen >gi|2392368|pdb|1IEB|C Chain C, Histocompatibility Antigen
IKEEHTIIQAEFYLLPDKRGEFMFDFDGDEIFHVDIEKSETIWRLEEFAKFASFEAQGALANIAVDKANLDVMKERSNNT
PDANVAPEVTVLSRSPVNLGEPNILICFIDKFSPPVVNVTWLRNGRPVTEGVSETVFLPRDDHLFRKFHYLTFLPSTDDF
YDCEVDHWGLEEPLRKTWEFEEKTLLPETKEN
>gi|211925536|dbj|BAG81991.1| MHC class II antigen DR alpha chain [Macaca fascicularis] >gi|211925538|dbj|BAG81992.1| MHC class II antigen DR alpha chain [Macaca fascicularis] >gi|211925540|dbj|BAG81993.1| MHC class II antigen DR alpha chain [Macaca fascicularis] >gi|211925542|dbj|BAG81994.1| MHC class II antigen DR alpha chain [Macaca fascicularis] >gi|211925544|dbj|BAG81995.1| MHC class II antigen DR alpha chain [Macaca fascicularis] >gi|211925546|dbj|BAG81996.1| MHC class II antigen DR alpha chain [Macaca fascicularis] >gi|211925548|dbj|BAG81997.1| MHC class II antigen DR alpha chain [Macaca fascicularis] >gi|211925550|dbj|BAG81998.1| MHC class II antigen DR alpha chain [Macaca fascicularis] >gi|211925552|dbj|BAG81999.1| MHC class II antigen DR alpha chain [Macaca fascicularis] >gi|211925554|dbj|BAG82000.1| MHC class II antigen DR alpha chain [Macaca fascicularis] >gi|211925556|dbj|BAG82001.1| MHC class II antigen DR alpha chain [Macaca fascicularis] >gi|211925558|dbj|BAG82002.1| MHC class II antigen DR alpha chain [Macaca fascicularis] >gi|211925564|dbj|BAG82005.1| MHC class II antigen DR alpha chain [Macaca fascicularis] >gi|211925566|dbj|BAG82006.1| MHC class II antigen DR alpha chain [Macaca fascicularis] >gi|211925568|dbj|BAG82007.1| MHC class II antigen DR alpha chain [Macaca fascicularis] >gi|211925570|dbj|BAG82008.1| MHC class II antigen DR alpha chain [Macaca fascicularis] >gi|211925572|dbj|BAG82009.1| MHC class II antigen DR alpha chain [Macaca fascicularis] >gi|211925574|dbj|BAG82010.1| MHC class II antigen DR alpha chain [Macaca fascicularis] >gi|211925576|dbj|BAG82011.1| MHC class II antigen DR alpha chain [Macaca fascicularis] >gi|211925578|dbj|BAG82012.1| MHC class II antigen DR alpha chain [Macaca fascicularis] >gi|211925580|dbj|BAG82013.1| MHC class II antigen DR alpha chain [Macaca fascicularis] >gi|211925582|dbj|BAG82014.1| MHC class II antigen DR alpha chain [Macaca fascicularis] >gi|211925584|dbj|BAG82015.1| MHC class II antigen DR alpha chain [Macaca fascicularis] >gi|211925586|dbj|BAG82016.1| MHC class II antigen DR alpha chain [Macaca fascicularis] >gi|211925588|dbj|BAG82017.1| MHC class II antigen DR alpha chain [Macaca fascicularis] >gi|211925590|dbj|BAG82018.1| MHC class II antigen DR alpha chain [Macaca fascicularis] >gi|211925592|dbj|BAG82019.1| MHC class II antigen DR alpha chain [Macaca fascicularis] >gi|211925594|dbj|BAG82020.1| MHC class II antigen DR alpha chain [Macaca fascicularis] >gi|211925598|dbj|BAG82022.1| MHC class II antigen DR alpha chain [Macaca fascicularis] >gi|211925602|dbj|BAG82024.1| MHC class II antigen DR alpha chain [Macaca fascicularis] >gi|211925604|dbj|BAG82025.1| MHC class II antigen DR alpha chain [Macaca fascicularis] >gi|211925608|dbj|BAG82027.1| MHC class II antigen DR alpha chain [Macaca fascicularis] >gi|211925612|dbj|BAG82029.1| MHC class II antigen DR alpha chain [Macaca fascicularis]
EHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMTKRSNNTPIT
NVPPEVTVLTNSPVELGEPNVLICFIDKFSPPVVKVTWLKNGKPVTTGVSETVFLPREDHLFRKFHYLPFLPSTEDIYDC
KVEHWGLDAPLLKHW
>gi|339266049|gb|AEJ36148.1| MHC class II antigen [Ovis aries] >gi|339266069|gb|AEJ36158.1| MHC class II antigen [Ovis aries]
IGTYGVNIYQTYGPSGYYTHEFDGDEEFYVDLEKRETVWRLPEFSKFTSFDPQGALRNIATVKHNLEILIQRSNSTAATN
KVPEVTVFSKSPVMLGQPNTLICHVDNIFPPVINITWLRNGHSVTEGVSETSFLIKSDYSFLKINYLTFLPSDDDVYDCK
VEHWGLDEPLLKHWEP
>gi|116667182|pdb|2FSE|A Chain A, Crystallographic Structure Of A Rheumatoid Arthritis Mhc Susceptibility Allele, Hla-Dr1 (Drb10101), Complexed With The Immunodominant Determinant Of Human Type Ii Collagen >gi|116667184|pdb|2FSE|C Chain C, Crystallographic Structure Of A Rheumatoid Arthritis Mhc Susceptibility Allele, Hla-Dr1 (Drb10101), Complexed With The Immunodominant Determinant Of Human Type Ii Collagen
EHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMTKRSNYTPIT
NVAPEVTVLSRSPVNLGEPNILICFIDKFSPPVVNVTWLRNGRPVTEGVSETVFLPRDDHLFRKFHYLTFLPSTDDFYDC
EVDHWGLEEPLRKHWEFE
>gi|6730288|pdb|1D9K|C Chain C, Crystal Structure Of Complex Between D10 Tcr And Pmhc I-AkCA >gi|6730293|pdb|1D9K|G Chain G, Crystal Structure Of Complex Between D10 Tcr And Pmhc I-AkCA
IEADHVGSYGITVYQSPGDIGQYTFEFDGDELFYVDLDKKETVWMLPEFAQLRRFEPQGGLQNIATGKHNLEILTKRSNS
TPATNEAPQATVFPKSPVLLGQPNTLICFVDNIFPPVINITWLRNSKSVTDGVYETSFFVNRDYSFHKLSYLTFIPSDDD
IYDCKVEHWGLEEPVLKHWEPEI
>gi|211925600|dbj|BAG82023.1| MHC class II antigen DR alpha chain [Macaca fascicularis] >gi|211925610|dbj|BAG82028.1| MHC class II antigen DR alpha chain [Macaca fascicularis] >gi|211925614|dbj|BAG82030.1| MHC class II antigen DR alpha chain [Macaca fascicularis]
EHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMTKRSNNTPIT
NVPPEVTVLTNSPVELGEPNVLICFIDKFSPPVVKVTWLKNGKPVTTGVSETVFLPREDHLFRKFHYLPFLPSTEDIYDC
KVEHWGLDVPLLKHW
>gi|126031612|pdb|2OJE|A Chain A, Mycoplasma Arthritidis-Derived Mitogen Complexed With Class Ii Mhc Molecule Hla-Dr1HA COMPLEX IN THE PRESENCE OF EDTA >gi|126031616|pdb|2OJE|E Chain E, Mycoplasma Arthritidis-Derived Mitogen Complexed With Class Ii Mhc Molecule Hla-Dr1HA COMPLEX IN THE PRESENCE OF EDTA
KEEHVIIQAEFYLNPDQSGEFXFDFDGDEIFHVDXAKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIXTKRSNYTP
ITNVPPEVTVLTNSPVELREPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVSETVFLPREDHLFRKFHYLPFLPSTEDVY
DCRVEHWGLDEPLLKHWEFD
>gi|67464154|pdb|1U3H|C Chain C, Crystal Structure Of Mouse Tcr 172.10 Complexed With Mhc Class Ii I-Au Molecule At 2.4 A >gi|67464159|pdb|1U3H|G Chain G, Crystal Structure Of Mouse Tcr 172.10 Complexed With Mhc Class Ii I-Au Molecule At 2.4 A
IEADHVGSYGIVVYQSPGDIGQYTFEFDGDELFYVDLDKKETIWMLPEFAQLRSFDPQGGLQNIATGKHNLGVLTKRSNS
TPATNEAPQATVFPKSPVLLGQPNTLICFVDNIFPPVINITWLRNSKSVADGVYETSFFVNRDYSFHKLSYLTFIPSDDD
IYDCKVEHWGLEEPVLKHWEPE
>gi|409974002|pdb|4GG6|A Chain A, Protein Complex >gi|409974004|pdb|4GG6|C Chain C, Protein Complex
EDIVADHVASYGVNLYQSYGPSGQYSHEFDGDEEFYVDLERKETVWQLPLFRRFRRFDPQFALTNIAVLKHNLNIVIKRS
NSTAATNEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSETSFLSKSDHSFFKISYLTFLPSA
DEIYDCKVEHWGLDEPLLKHWEPESSADLVPR
>gi|158431340|pdb|2Z31|C Chain C, Crystal Structure Of Immune Receptor Complex
IEADHVGSYGIVVYQSPGDIGQYTFEFDGDELFYVDLDKKETIWMLPEFAQLRSFDPQGGLQNIATGKHNLGVLTKRSNS
TPATNEAPQATVFPKSPVLLGQPNTLICFVDNIFPPVINITWLRNSKSVADGVYETSFFVNRDYSFHKLSYLTFIPSDDD
IYDCKVEHWGLEEPVLKHWEP
>gi|158429546|pdb|2PXY|C Chain C, Crystal Structures Of Immune Receptor Complexes
DDIEADHVGSYGIVVYQSPGDIGQYTFEFDGDELFYVDLDKKETIWMLPEFAQLRSFDPQGGLQNIATGKHNLGVLTKRS
NSTPATNEAPQATVFPKSPVLLGQPNTLICFVDNIFPPVINITWLRNSKSVADGVYETSFFVNRDYSFHKLSYLTFIPSD
DDIYDCKVEHWGLEEPVLKHWEP
>gi|158429108|pdb|2NNA|A Chain A, Structure Of The Mhc Class Ii Molecule Hla-Dq8 Bound With A Deamidated Gluten Peptide
EDIVADHVASYGVNLYQSYGPSGQYSHEFDGDEEFYVDLERKETVWQLPLFRRFRRFDPQFALTNIAVLKHNLNIVIKRS
NSTAATNEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSETSFLSKSDHSFFKISYLTFLPSA
DEIYDCKVEHWGLDEPLLKHWEPE
>gi|145579642|pdb|2ICW|A Chain A, Crystal Structure Of A Complete Ternary Complex Between Tcr, Superantigen, And Peptide-Mhc Class Ii Molecule >gi|145579645|pdb|2ICW|D Chain D, Crystal Structure Of A Complete Ternary Complex Between Tcr, Superantigen, And Peptide-Mhc Class Ii Molecule
EEHVIIQAEFYLNPDQSGEFXFDFDGDEIFHVDXAKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIXTKRSNYTPI
TNVPPEVTVLTNSPVELREPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVSETVFLPREDHLFRKFHYLPFLPSTEDVYD
CRVEHWGLDEPLLKHWEFD
>gi|20664197|pdb|1KT2|A Chain A, Crystal Structure Of Class Ii Mhc Molecule Iek Bound To Moth Cytochrome C Peptide >gi|20664199|pdb|1KT2|C Chain C, Crystal Structure Of Class Ii Mhc Molecule Iek Bound To Moth Cytochrome C Peptide
IKEEHTIIQAEFYLLPDKRGEFMFDFDGDEIFHVDIEKSETIWRLEEFAKFASFEAQGALANIAVDKANLDVMKERSNNT
PDANVAPEVTVLSRSPVNLGEPNILICFIDKFSPPVVNVTWLRNGRPVTEGVSETVFLPRDDHLFRKFHYLTFLPSTDDF
YDCEVDHWGLEEPLRKHWEFEE
>gi|199313|gb|AAB46387.1| MHC class II alpha chain [Mus musculus] >gi|655348008|gb|AIC84009.1| MHC class II antigen O region alpha locus [Mus musculus]
MVLFVELVPVLLTVMSFLSPRGVRAIKADHMGSYGPAFYQSYDASGQFTHEFDGEQIFSVDLKNEEVVWRLPEFGDFAHS
DFQSGLMSISMIKAHLDILVERSNRTRAVSVPPRVTVLPKTRVELGKPNVLICIVDDIFPPVINVTWLRNSQPITKGVAQ
TSFYSQPNHRFRKFHYLTFVPSAEDVYDCKVEHWGLDTPLLQHWEPQVLTPPPDTTETLICGLGLVLGLMGCLLGTVLMI
TGTRRPSIRR
>gi|296474346|tpg|DAA16461.1| TPA: major histocompatibility complex, class II, DQ alpha 2 [Bos taurus]
MVLNRALILGAFALTTMMSPCGGEDIVADHVGSYGTEIYQSHGPSGQYTQEFDGDELFYVDLGKKETVWRLPMFSQFAGF
DPQAALSEIATAKHNLDVLTKRSNFTPVINEVPEVTVFSKSPMVLGQPNTLICHMDNFPPVINITWLKNGHAVTEGVSET
SFLPKDDHSFLKIGYLTFLPSDDDVYDCKVEHWSLDEPLLKHWGMYEFHPFWYSLFFYQAQNTLSFGPSVSQSKACFPHF
KVSKIIETFIRFPKPGALSFCSMNTTPPAH
>gi|339266053|gb|AEJ36150.1| MHC class II antigen [Ovis aries]
VGIYGADFYQSHGPSGQYTHEFDGDELFYVDLGKKETVWRLPMFGEFTSFDPQGALSEIATAKHNLDIMIKRSNFTPVIN
EVPEVTVFSKSPVMLGQPNTLICHVDNIFPPVINITWLKNGHAVTEGVSETSFLPKDDHSFLKIGYLTFLPSDDDVYDCK
VEHWGLEEPLLKHWEP
>gi|339266045|gb|AEJ36146.1| MHC class II antigen [Ovis aries]
VGIYGADFYQSHGPSGQYTHEFDGDELFYVDLGKKETVWRLPMFGEFTSFDPQGALSEIATAKQNLDIMIKRSNFTPVIN
EVPEVTVFSKSPVMLGQPNTLICHVDNIFPPVINITWLKNGHAVTEGVSETSFLPKDDHSFLKIGYLTFLPSDDDVYDCK
VEHWGLEEPLLKHWEP
>gi|339266059|gb|AEJ36153.1| MHC class II antigen [Ovis aries]
IGIYGVNVYQTYGPSGYYTHEFDGDEEFYVDLEKRETVWRLPEFSKFTSFDPQGALRNIATAKHNLEILIQMSNSTAATN
KVPEVTVFSKSPVMLGQPNTLICHVDNIFPPVINITWLRNGHSVTEGVSETSFLIKSDYSFLKINYLTFLPSDDDVYDCK
VEHWGLDEPLLKHWEP
>gi|3891485|pdb|1IAO|A Chain A, Class Ii Mhc I-Ad In Complex With Ovalbumin Peptide 323-339 >gi|4139968|pdb|2IAD|A Chain A, Class Ii Mhc I-ad In Complex With An Influenza Hemagglutinin Peptide 126-138
EDDIEADHVGFYGTTVYQSPGDIGQYTHEFDGDELFYVDLDKKKTVWRLPEFGQLILFEPQGGLQNIAAEKHNLGILTKR
SNFTPATNEAPQATVFPKSPVLLGQPNTLICFVDNIFPPVINITWLRNSKSVTDGVYETSFLVNRDHSFHKLSYLTFIPS
DDDIYDCKVEHWGLEEPVLKHWEPEISSADLVPR
>gi|836628|emb|CAA23782.1| histocompatibility antigen HLA-DR [Homo sapiens]
IIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMTKRSNYTPITNVP
PEVTVLTNSPVELREPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVSETVFLPREDHLFRKFHYLPFLPSTEDVYDCRVE
HWGLDEPLLKH
>gi|226054226|ref|NP_032232.2| histocompatibility 2, O region alpha locus precursor [Mus musculus] >gi|3811390|gb|AAC69906.1| H2-O alpha [Mus musculus] >gi|12861219|dbj|BAB32142.1| unnamed protein product [Mus musculus] >gi|74218021|dbj|BAE41995.1| unnamed protein product [Mus musculus] >gi|148678304|gb|EDL10251.1| histocompatibility 2, O region alpha locus [Mus musculus]
MVLFVELVPVLLTAMSFLSPRGVRAIKADHMGSYGPAFYQSYDASGQFTHEFDGEQIFSVDLKNEEVVWRLPEFGDFAHS
DFQSGLMSISMIKAHLDILVERSNRTRAVSVPPRVTVLPKTRVELGKPNVLICIVDDIFPPVINVTWLRNSQPITKGVAQ
TSFYSQPNHRFRKFHYLTFVPSAEDVYDCKVEHWGLDTPLLQHWEPQVLTPPPDTIETLICGLGLVLGLMGCLLGTVLMI
TGTRRPSIRR
>gi|10835694|pdb|1F3J|A Chain A, Histocompatibility Antigen I-Ag7 >gi|10835697|pdb|1F3J|D Chain D, Histocompatibility Antigen I-Ag7
IEADHVGFYGTTVYQSPGDIGQYTHEFDGDELFYVDLDKKKTVWRLPEFGQLILFEPQGGLQNIAAEKHNLGILTKRSNF
TPATNEAPQATVFPKSPVLLGQPNTLICFVDNIFPPVINITWLRNSKSVTDGVYETSFLVNRDHSFHKLSYLTFIPSDDD
IYDCKVEHWGLEEPVLKHWEPE
>gi|15826757|pdb|1JK8|A Chain A, Crystal Structure Of A Human Insulin Peptide-Hla-Dq8 Complex
VADHVASYGVNLYQSYGPSGQYSHEFDGDEEFYVDLERKETVWQLPLFRRFRRFDPQFALTNIAVLKHNLNIVIKRSNST
AATNEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSETSFLSKSDHSFFKISYLTFLPSDDEI
YDCKVEHWGLDEPLLKHWEPE
>gi|666685042|gb|AIG20544.1| MHC class II protein, partial [Macaca fascicularis]
EDIVADHVASYGVNVYQSYGLSGQYSHEFDGDEQFYVDLGRKETVWRLPILSQFSFDPQFALRNIAVLTHNLNILIKRSN
STAATNEVPEVTVFSKSPVTLGHPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSETSFLSKSDHSFFKISYLTFLPSAD
EIYDCRVEHWGLDEPLLKHW
>gi|187953079|gb|AAI38998.1| Histocompatibility 2, O region alpha locus [Mus musculus] >gi|187954151|gb|AAI38997.1| Histocompatibility 2, O region alpha locus [Mus musculus]
MVLFVELVPVLLTVMSFLSPRGVRAIKADHMGSYGPAFYQSYDASGQFTHEFDGEQIFSVDLKNEEVVWRLPEFGDFAHS
DFQSGLMSISMIKAHLDILVERSNRTRAVSVPPRVTVLPKTRVELGKPNVLICIVDDIFPPVINVTWLRNSQPITKGVAQ
TSFYSQPNHRFRKFHYLTFVPSAEDVYDCKVEHWGLDTPLLQHWEPQVLTPPPDTIETLICGLGLVLGLMGCLLGTVLMI
TGTRRPSIRR
>gi|551702053|pdb|4MAY|A Chain A, Crystal Structure Of An Immune Complex >gi|557129198|pdb|4GRL|A Chain A, Crystal Structure Of A Autoimmune Tcr-mhc Complex
DIVADHVASCGVNLYQFYGPSGQYTHEFDGDEQFYVDLERKETAWRWPEFSKFGGFDPQGALRNMAVAKHNLNIMIKRYN
STAATNEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGQSVTEGVSETSFLSKSDHSFFKISYLTFLPSAD
EIYDCKVEHWGLDQPLLKHWEPE
>gi|9256955|pdb|1ES0|A Chain A, Crystal Structure Of The Murine Class Ii Allele I-A(G7) Complexed With The Glutamic Acid Decarboxylase (Gad65) Peptide 207-220 >gi|227343693|pdb|3CUP|A Chain A, Crystal Structure Of The Mhc Class Ii Molecule I-Ag7 In Complex With The Peptide Gad221-235 >gi|295982526|pdb|3MBE|A Chain A, Tcr 21.30 In Complex With Mhc Class Ii I-ag7hel(11-27) >gi|295982531|pdb|3MBE|E Chain E, Tcr 21.30 In Complex With Mhc Class Ii I-ag7hel(11-27)
EDDIEADHVGFYGTTVYQSPGDIGQYTHEFDGDELFYVDLDKKKTVWRLPEFGQLILFEPQGGLQNIAAEKHNLGILTKR
SNFTPATNEAPQATVFPKSPVLLGQPNTLICFVDNIFPPVINITWLRNSKSVTDGVYETSFLVNRDHSFHKLSYLTFIPS
DDDIYDCKVEHWGLEEPVLKHWSSADLVPR
>gi|20664203|pdb|1KTD|A Chain A, Crystal Structure Of Class Ii Mhc Molecule Iek Bound To Pigeon Cytochrome C Peptide >gi|20664205|pdb|1KTD|C Chain C, Crystal Structure Of Class Ii Mhc Molecule Iek Bound To Pigeon Cytochrome C Peptide
IKEEHTIIQAEFYLLPDKRGEFMFDFDGDEIFHVDIEKSETIWRLEEFAKFASFEAQGALANIAVDKANLDVMKERSNNT
PDANVAPEVTVLSRSPVNLGEPNILICFIDKFSPPVVNVTWLRNGRPVTEGVSETVFLPRDDHLFRKFHYLTFLPSTDDF
YDCEVDHWGLEEPLRKTWEFEE
>gi|15988325|pdb|1JL4|A Chain A, Crystal Structure Of The Human Cd4 N-Terminal Two Domain Fragment Complexed To A Class Ii Mhc Molecule
HVGSYGITVYQSPGDIGQYTFEFDGDELFYVDLDKKETVWMLPEFAQLRRFEPQGGLQNIATGKHNLEILTKRSNSTPAT
NEAPQATVFPKSPVLLGQPNTLICFVDNIFPPVINITWLRNSKSVTDGVYETSFFVNRDYSFHKLSYLTFIPSDDDIYDC
KVEHWGLEEPVLKHWEPE
>gi|42543497|pdb|1R5V|A Chain A, Evidence That Structural Rearrangements AndOR FLEXIBILITY DURING TCR Binding Can Contribute To T-Cell Activation >gi|42543500|pdb|1R5V|C Chain C, Evidence That Structural Rearrangements AndOR FLEXIBILITY DURING TCR Binding Can Contribute To T-Cell Activation >gi|46015426|pdb|1R5W|A Chain A, Evidence That Structural Rearrangements And/or Flexibility During Tcr Binding Can Contribute To T-cell Activation >gi|46015428|pdb|1R5W|C Chain C, Evidence That Structural Rearrangements And/or Flexibility During Tcr Binding Can Contribute To T-cell Activation
EEHTIIQAEFYLLPDKRGEFMFDFDGDEIFHVDIEKSETIWRLEEFAKFASFEAQGALANIAVDKANLDVMKERSNNTPD
ANVAPEVTVLSRSPVNLGEPNILICFIDKFSPPVVNVTWLRNGRPVTEGVSETVFLPRDDHLFRKFHYLTFLPSTDDFYD
CEVDHWGLEEPLRKHWEFEE
>gi|339266055|gb|AEJ36151.1| MHC class II antigen [Ovis aries]
VGIYGADFYQSHGPSGQYTHEFDGDELFYVDLGKKETVWRLPMFGEFTSFDPQGALSEIAKAKQTLDIMIKRSNFTPVIN
EVPEVTVFSKSPVMLGQPNTLICHVDNIFPPVINITWLKNGHAVTEGVSETSFLPKDDHSFLKIGYLTFLPSDDDVYDCK
VEHWGLEEPLLKHWEP
>gi|339266081|gb|AEJ36164.1| MHC class II antigen [Ovis aries]
IAAYGINVYHSYGPSGYYTHEFDGDEEFYVDLEKRETVWHLPVFSQFRSFDPQGALRNIATVKHNLEVLIQRSNSTAATN
KVPEVTVFSKSPMMLGQPNTLICHVDNIFPPVINITWLRNGHSVIEGVSETSFLSKDDHSFSKISYLTFLPSDDDVYDCK
VEHWGLDKPLLKHWEP
>gi|1197182|dbj|BAA08164.1| RT1.DOa [Rattus norvegicus]
MVLFVELVQVFLTIMSFLGPRGVWAIKADHMGSYGPAFYQSYDASGQFTHEFDGEQIFSVDLKKGEVVWRLPEFADFAYS
DFQSGLMSISMIRAHLDVLVERSNRTRAVSVPPRVTVFPKSRVELGKPNVLICMVEDIFPPMINITWLRNSQPITKGVTQ
TSFYSQPNHRFRKFHYLTFVPTAEDVYDCRVEHWGLDAPLLQHWEPQVLTPPPDTTETLICGLGLALGLVGCLLGTVLMV
TATRMPSTRR
>gi|339266075|gb|AEJ36161.1| MHC class II antigen [Ovis aries]
FGSYGTEIYQSHGPSGQYTQEFDGDELFYVDLGKKETVWRLPMFSQFAGFDPQGALSEIATAKQNLDILTKRSNFTPAIN
EVPEVTVFSKSPVMLGQPNTLICHVDNIFPPVINITWLKNGHAVTEGVSETSFLPKDDHSFLKIGYLTFLPSDDDVYDCK
VEHWGLDEPLLKHWEP
>gi|28848931|gb|AAO47362.1| MHC class II HLA-DQ-alpha chain [Homo sapiens]
DHVASYGVNLYQSYGPSGQFTHEFDGDEQFYVDLGRKETVWCLPVLRQFRFDPQFALTNIAVTKHNLNILIKRSNSTAAT
NEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSETRFLSKSDHSFFKISYLTFLPSADEIYDC
KVEHWGLDEPLLKHW
>gi|330689608|pdb|3QIU|A Chain A, Crystal Structure Of The 226 Tcr In Complex With MccI-Ek
EEHTIIQAEFYLLPDKRGEFMFDFDGDEIFHVDIEKSETIWRLEEFAKFASFEAQGALANIAVDKANLDVMKERSNNTPD
ANVAPEVTVLSRSPVNLGEPNILICFIDKFSPPVVNVTWLRNGRPVTEGVSETVFLPRDDHLFRKFHYLTFLPSTDDFYD
CEVDHWGLEEPLRKHWEFE
>gi|59938802|gb|AAX12164.1| MHC class II antigen [Bos taurus]
DHMGSYGPAFYQSYDGAGQFTYDFDGEQLFSVDLKKXEAVWRLPEFGNFAYFDPQSGLVSIAMIKAHLEDLVKRSNGTRA
PNVSPRVAVLPKSXVQLGEPNVLICIVDKIFPPVINITWLRNGHPVTQGVTQSSFYAQPDHLFRKFHYLTFVPLVDDFYD
CKVEHWGLDQPLFQHWEPQVPTALPDTTGTLVCALGLVLGLGGFLGGITLIITGTCLSSTPR
>gi|339266085|gb|AEJ36166.1| MHC class II antigen [Ovis aries]
FGSYGTTIYQSHGPSGQFTQEFDGDELFYVDLEKKETVWRLPMFSQFAGFDPQGALSNIAAAKHNLDILTKRSNSTPVIN
DVPEVTVFSKSPVMLGQPNTLICHVDNIFPPVINITWLKNGHAVTEGVYETSFLPKDGHSFFKIGYLTFLPSDDDVYDCK
VEHWGLEEPLLKHWEP
>gi|258613960|ref|NP_898874.2| RT1 class II, locus DOa precursor [Rattus norvegicus] >gi|564396610|ref|XP_006255976.1| PREDICTED: RT1 class II, locus DOa isoform X1 [Rattus norvegicus] >gi|46237555|emb|CAE83936.1| RT1 class II, DO alpha [Rattus norvegicus] >gi|149043367|gb|EDL96818.1| RT1 class II, locus DOa [Rattus norvegicus]
MVLFVELVQVFLTIMSFLGPRGVWAIKADHMGSYGPAFYQSYDASGQFTHEFDGEQIFSVDLKKGEVVWRLPEFADFAYS
DFQSGLMSISMIRAHLDVLVERSNRTRAVSVPPRVTVFPKSRVELGKPNVLICMVEDIFPPVINITWLRNSQPITKGVTQ
TSFYSQPNHRFRKFHYLTFVPTAEDVYDCRVEHWGLDAPLLQHWEPQVLTPPPDTTETLICGLGLALGLVGCLLGTLLMV
TATRMPSTRR
>gi|27819284|gb|AAO23559.1| MHC class II antigen [Homo sapiens]
DHVASYGVNLYQSYGPSGQYTHEFDGDEQFYVDLGRKETVWCLPVLRQFRFDPQFALTNIAVTKHNLNILIKRSNSTAAT
NEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSETSFLSKSDHSFFKISYLTFLPSADEIYDC
KVEHWGLDEPLLKHW
>gi|211925596|dbj|BAG82021.1| MHC class II antigen DR alpha chain [Macaca fascicularis]
EHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMTKRSNNTPIT
NEVTVLTNSPVELGEPNILICFIDKFSPPVVKVTWLKNGKPVTTGVSETVFLPREDHLFRKFHYLPFLPSTEDIYDCKVE
HWGLDAPLLKHW
>gi|339266061|gb|AEJ36154.1| MHC class II antigen [Ovis aries]
VGSYGTVIYQSHGPSGQYTHEFDRDELFYVDLEKKETVWRLPMFSQFADFDPQGALSNIATAKHNLDIMTQWHNSTPVIN
EVPEVTVFSKSPVMLGQPNTLICHVDNIFPPVINITWLKNGHAVSEGVSETSFLPKDDDSFFRFGYLTFLPSDDDVYDCK
VEHWGLDEPLLKHWEP
>gi|404299|emb|CAA81345.1| major histocompatibility complex class II [Vulpes lagopus]
GVNVYQSYGPSGQYTHEFDGDEEFYVDLEKKETVWRLPVFSTFTSFDPQGALRNLAIAKQNLNILIERSNQTAATNEVPE
VTVFSKSPVMLGQPNTLICLVDNIFPPVINVTWLKNRHSVTEGVSETSFLAKEDHSFSKISYLTFLPSAEDIYDCKVEHW
GLDEPLLKH
>gi|28630937|gb|AAO45622.1| MHC class II HLA-DQ-alpha chain [Homo sapiens] >gi|375270222|gb|AFA43495.1| MHC class II antigen, partial [Homo sapiens]
DHVASYGVNLYQSYGPSGQYTHEFDGDEQFYVDLGRKETVWCLPVLRQFRFDPQFALTNIAVTKHNLNILIKRSNSTAAT
NEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSEISFLSKSDHSFFKISYLTFLPSADEIYDC
KVEHWGLDEPLLKHW
>gi|339266057|gb|AEJ36152.1| MHC class II antigen [Ovis aries]
VGCYSTIIYQSHGPSGQFTHEFDGDELLYVDLEKKETVWRLPIFGELTSFDPQGALSNIATAKHNLDILTKCSNCTPVIN
EVPEVTVFSKSPVMLGQPNTLICYVDNIFPPVINITWLKNGHAVTEGVSEISFLPKDDNSFFKIGYLTFLPSDDDVYDCK
VEHWGLDEPLLKHWEP
>gi|1666303|emb|CAA69242.1| dqa1 [Canis lupus familiaris]
GINVYQSYGPSGQYTHEFDGDEEFYVDLEKKETVWRLPVFSTFTSFDPQGALRNLAIIKQNLNILTKRSNQTAATNEVPE
VTVFSKSPVMLGQPNTLICLVDNIFPPVINVTWLKNRHSVTEGVSETSFLAKGDHSFSKISYLTFLPSAEDIYDCKVEHW
GLDEPLLKH
>gi|44953801|gb|AAS49496.1| MHC class II antigen [Homo sapiens]
DHVASYGVNLYQSYGPSGQYTHEFDGDEQFYVDLGRKETVWCLPVLRQFRFDPQFALTNIAVTKHNLNILIKRSNSTAAT
NEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSETSFLSKSDHSFFKISHLTFLPSADEIYDC
KVEHWGLDEPLLKHW
>gi|527354612|emb|CDF76728.1| MHC class II antigen, partial [Homo sapiens]
DHVASCGVNLYQFYGPSGQYTHEFDGDEEFYVDLERKETAWRWPEFSKFGGFDPQGALRNMAVAKHNLNIMIKRYNSTAA
TNEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGQSVTEGVSETSFLSKSDHSFFKISYLTFLPSADEIYD
CKVQHWGLDQPLLKHW
>gi|164009|gb|AAA30867.1| integral membrane protein, partial [Canis lupus familiaris]
GINVYQSYGPSGQFTHEFDGDEEFYVDLEKKETVWRLPVFSTFTSFDPQGALRNLAITKQNLNIMTKRSNKTAATNEVPE
VTVFSKSPVMLGQPNTLICLVDNIFPPVINVTWLKNRHSVTEGVSETSFLAKGDHSFSKISYLTFLPSAEDIYDCKVEHW
GLDEPLLKH
>gi|9438772|gb|AAB35455.2| major histocompatibility complex class II alpha chain [Rattus sp.]
MVLFVELVQVFLTIMSFLGPRGVWDIKADHMGSYGPAFYQSYDASGQFTHEFDGAQIFSVDLKKGEVVWRLPEFADFAYS
DFQSGLMSISMIRAHLDVLVERSNRTRAVSVPPRVTVFPKSRVELGKPNVLICMVEDIFPPMINITWLRNSQPITKGVTQ
TSFYSQPNHRFRKFHYLTFVPTAEDVYDCRVEHWGLDAPLLQHWEPQVLTPPPDTTETLI
>gi|339266067|gb|AEJ36157.1| MHC class II antigen [Ovis aries]
VGTYGAEFYQSHGPSSEYTQEFDEDELLYVDLEKKETVWRLPMFGQFAGFHIQVALSNIATAKHNLDVMTKWYNFTPVIN
EVPEVTVFSKSPVMLGQPNTLICHVDNIFPPVINITWLKNGHAVTKGVYETSFLPKDDHSFFKFGYLTFLPSDDDVYDCK
VEHWGLEEPLLKHWEP
>gi|339266077|gb|AEJ36162.1| MHC class II antigen [Ovis aries]
VGSYGTEIYQSHGPSGQYTMESDGDELFYVDLEKKETVWRLPMFGELTSFDPQGALSEIAKAKQNLDILTKLSNFTPVIN
EVPEVTVFSKSPVMLGQPNTLICHVDNIFPPVINITWLKNGHAVTEGVYETSFLPKDDDSFFKFGYLTFLPSDDDIYDCK
VEHWGLEEPLLKHWEP
>gi|164013|gb|AAA30869.1| integral membrane protein, partial [Canis lupus familiaris]
GINVYQSYGPSGQFTHEFDGDEEFYVDLEKKETVWRLPVFSTFRSFDPQGALRNLAIIKQNLNIMTKRSNQTAATNEVPE
VTVFSKSPVMLGQPNTLICLVDNIFPPVINVTWLKNRHSVTEGVSETSFFAKGDHSFSKISYLTFLPSAEDIYDCKVEHW
GLDEPLLKH
>gi|164007|gb|AAA30866.1| integral membrane protein, partial [Canis lupus familiaris]
GINVYQSYGPSGQYTHEFDGDEEFYVDLEKKETVWRLPVFSTFTSFDPQGALRNLAITKQNLNIMTKRSNKTAATNEVPE
VTVFSKSPVMLGQPNTLICLVDNIFPPVINVTWLKNRHSVTEGVSETSFLAKGDHSFSKISYLTFLPSAEDIYDCKVEHW
GLDEPLLKH
>gi|1666301|emb|CAA69241.1| dqa1 [Canis lupus familiaris]
GINVYQSYGPSGQYTHEFDGDEEFYVDLEKKETVWRLPVFSTFRSFDPQGALRNLAIIKQNLNILTKRSNQTAATNEVPE
VTVFSKSPVMLGQPNTLICLVDNIFPPVINVTWLKNRHSVTEGVSETSFFAKGDHSFSKISYLTFLPSAEDIYDCKVEHW
GLDEPLLKH
>gi|339266065|gb|AEJ36156.1| MHC class II antigen [Ovis aries]
VGTYGAEFYQSHGPSSEYTQEFDEDELLYVDLEKKETVWRLPMFGQFAGFHIQVALSNIATEKHNLDVMTKWYNFTPVIN
EVPEVTVFSKSPVMLGQPNTLICHVDNIFPPVINITWLKNGHAVTKGVYETSFLPKDDHSFFKFGYLTFLPSDDDVYDCK
VEHWGLEEPLLKHWEP
>gi|164011|gb|AAA30868.1| integral membrane protein, partial [Canis lupus familiaris]
GINVYQSYGPSGQYTHEFDGDEEFYVDLEKKETVWRLPVFSTFRSFDPQGALRNLAIIKQNLNIMTKRSNQTAATNEVPE
VTVFSKSPVMLGQPNTLICLVDNIFPPVINVTWLKNRHSVTEGVSETSFFAKGDHSFSKISYLTFLPSAEDIYDCKVEHW
GLDEPLLKH
>gi|339266073|gb|AEJ36160.1| MHC class II antigen [Ovis aries]
IGTYGVNVYQTYGPSGYYTHEFDGDEEFYVDLEKRETVWRLPMFSEVGYFDPQFALRNIATFKHNLELMIQRSNSTAATN
KVPEVTVFSKSPMMLGQPNTLICHVDNIFPPVINITWLRNGHSVIEGVSATSFLSKDDYSFSKISYLTFLPSDDDVYDCK
VEHWGLDKPLLKHWEP
>gi|47078703|gb|AAT09985.1| MHC class II antigen [Homo sapiens]
DHVASCGVNLYQFYGPSGQYTHEFDGDEEFYVDLERKETAWRWPEFSKFGGFDPQGALRNMAVAKHNLNIMIKCYNSTAA
TNEVPEVTVFSKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGQSVTEGVSETSFLSKSDHSFFKISYLTFLPSADEIYD
CKVEHWGLDQPLLKHW
>gi|339266063|gb|AEJ36155.1| MHC class II antigen [Ovis aries]
IAAYGINVYHSYGPSGYYTHEFDGDEQFYVDLEKKETVWRLPEFSKFTSFDPQGALRNMASGKQTLEIMIQRSNSTAATN
KVPEVTVFSKSPVMLGQPNTLICHVDNIFPPVINITWLRNGHSVIEGTSETSFLSKDDHSFSKISYLTFLPSDDDVYDCK
VEHWGLEEPLLKHWEP
>gi|1666305|emb|CAA69243.1| dqa1 [Canis lupus familiaris]
GINVYQSYGPSGQYTHEFDGDEEFYVDLEKKETVWRLPVFSTFTSFDPQGALRNLARAKQNLNILTKSSNQTAATNEVPE
VTVFSKSPVMLGQPNTLICLVDNIFPPVINVTWLKNRHSVTEGVSETSFLAKGDHSFSKISYLTFLPSAEDIYDCKVEHW
GLDEPLLKH
>gi|339266047|gb|AEJ36147.1| MHC class II antigen [Ovis aries]
IGTYGTDFYQSHGPSGQYIHEFDGDEQLYVDLEKKETVWRLPMFDGLSFDPQRALSNIAIAKHNLDRLTKWYNFTPVINE
VPEVTVFSKSPVMLDQPNTLICHVDKIFPPVINITWLRNGHAVTEHVSETSFLLRSDYSYLKISYLTFLPSDDDVYDCKV
EHWGLDEPLLKHWEP
>gi|507986206|ref|XP_004695882.1| PREDICTED: HLA class II histocompatibility antigen, DR alpha chain-like, partial [Condylura cristata]
MKRSNYTRNTNVPPKVTVISEKPVELGEPNILICFIDKFSPPVINVTWLQNGKPVTTGVSETVFLPRKDQLFRKFHYLSF
IPSTEDFYDCKVDHWGLEEPLLKHWEFDLPTSHPETTESVVCALGLFVGLVGIIVGTILIIKGVHRGNAAELCG
>gi|339266039|gb|AEJ36143.1| MHC class II antigen [Ovis aries]
IGSYGTTIYQSHGPSSQYTQEFDGDELFYVDLEKKETVWRLPMFSQFAGFNIQDALNNIPAAKHNLGILTKRSNFTPVIN
EVPEVTVFSKSPMMLGQPNTLICHVDNIFPPVINITWLKNGHAVTEGVYATSFLPKDDHSFFKIGYLTFLPSDDDVYDCK
VEHWGLDEPLLKHWEP
>gi|339266071|gb|AEJ36159.1| MHC class II antigen [Ovis aries]
IGSYGTTIYQSHGPSSQYTQESDGDELFYVDLEKKETVWRLPMFSQFAGFNIQDALNNIPAAKHNLGILTKRSNFTPVIN
EVPEVTVFSKSPMMLGQPNTLICHVDNIFPPVINITWLKNGHAVTEGVYATSFLPKDDHSFFKIGYLTFLPSDDDVYDCK
VEHWGLDEPLLKHWEP
>gi|339266051|gb|AEJ36149.1| MHC class II antigen [Ovis aries]
FGSYGIHVYQSHGPSGQYTHEFDGDELFYVDLGKKETVWRLPMFSQFAGFDPQRAVIQLATSKHNLDYMTKHSNFTHAIN
EVPEVTVFSKSPVMLGQPNTLICHVDNIFPPVINITWLKNGHAVMEGVSETSFLSKDDHSFLKIGYLTFLPSDDDIYDCK
VEHWGLEEPLLKHWEP
>gi|629265950|dbj|BAO74094.1| major histocompatibility complex class II antigen DPA, partial [Macaca fascicularis]
FLLSLRGAGAIKADHVSTYVMFVQTHRPTGEFMFEFDEDEMFYVDLDKKETVWHLEEFGRAFFFEAQRVLSHIVILNDSL
NIMIQRSNHTPAANDPPEVTVFPKEPVELGQPNTL
>gi|355766445|gb|EHH62516.1| HLA class II histocompatibility antigen, DQ(6) alpha chain, partial [Macaca fascicularis]
GDEQFYVDLERKETVWRLPVLSQFSFDAQFALTNIAVGKQNLNYLMKQSNSTAATNEVPEVTVFSKSPVTLGHPNTLICL
VDNIFPPVVNITWLSNGHSVTEGVSETSFLSKSDHSFFKISYLTFLPSADEIYDCRVEHWGLDEPLLKHW
>gi|584081211|ref|XP_006760449.1| PREDICTED: HLA class II histocompatibility antigen, DQ alpha 1 chain-like, partial [Myotis davidii]
CCFLTAEVPEVTVFPKSPVELGQPNTLICAVDNIFPPVINISWLSNGHSVTQGVSETSFLSKSDDSFLKFSYLTFLPSAE
DVYDCKVEHWGLDQPLLRHWEPEIPAPMSELTETVVCALGLAVGLVGIVTGTVFIIQGLRPAGASRHQGPL
>gi|28189563|dbj|BAC56396.1| similar to MHC class II DQA2 (BoLA-DQA2) [Bos taurus]
ALILGALALTTMMSSSGGEDIVADHVGSYGTEIYQSHGPSGQYTQEFDGDEMFYVDLGKKETVWRLPMFSQFAGFDPQFA
LSEIATAKFNLDLLTKRSNFTPVINEVPEVTVFSKSPVMLGQPNTLICHVDNIFPPVINITWLKNGHAVTEGVSETSFLP
KDDHSFLKIGYLTFLPSDNDIYD
>gi|640778342|ref|XP_008060628.1| PREDICTED: HLA class II histocompatibility antigen, DP alpha 1 chain-like, partial [Tarsius syrichta]
TNLNILIQRSNHTQATSEPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLRNGQPVTEGVSETIFLPRTDYSFHK
FHYLTFMPLTDDVYDCKVDHWGLDKPLVGHW
>gi|629265974|dbj|BAO74106.1| MHC class II antigen, partial [Macaca fascicularis]
VILRALSLAFLLSLRGAGAIKADHVSTYVMFVQTHRPTGEFMFEFDEDEMFYVDLDKKETVWHLEEFGRAFFFEAQRVLS
HIVILNDSLNIMIQRSNHTPAANDPPEVAVFPKEPVELGQPNTL
>gi|35187022|gb|AAQ84179.1| MHC class II antigen [Homo sapiens] >gi|35187030|gb|AAQ84183.1| MHC class II antigen [Homo sapiens] >gi|35187038|gb|AAQ84187.1| MHC class II antigen [Homo sapiens]
PPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGELVTEGVAESLFLPRTDYSFHKFHYLTFVPSAEDFYDCRV
EHWGLDQPLLKHW
>gi|355569968|gb|EHH25558.1| hypothetical protein EGK_21414 [Macaca mulatta]
MILNKALMLAALALTTVMSPCGGEEIVEVPEVTVFSKSPVTLGHPNTLICLVDNIFPPVVNITWLSNGRSVTEGVSETSF
LSKSDHSFFKISYLTFLPSADEIYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLSMGLVGIVVGTVLIIRGL
RSVGASRHQGPL
>gi|119570924|gb|EAW50539.1| hCG2042724 [Homo sapiens]
LTTEVPEVTVFSKSPVTLGQPNILICLVDNIFPPVVNITWLSNGHSVTEGVSETSFLSKSDHSFFKISYLTLLPSAEESY
DCKVEHWGLDKPLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVFIIRGLRSVGASRHQGPL
>gi|511926555|ref|XP_004782399.1| PREDICTED: SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like, partial [Mustela putorius furo]
MMGPSGGEDIVDHVASYGINVYQSYGPSGQFTHEFDGDEEFYVDLEKKETVWRLPVFSTFGSFDPQGALRNLAIAKQNLN
ILIKLYNYTAATNEVPEMALFPKSSVSLGQPNTLICLVDNIFPPVINVTWLKNRHSVTEGVSETSFLAKKDHSFLKFSYL
TFLPSADDIYDCKVEH
>gi|205436|gb|AAA41609.1| MHC RT1.u-D-alpha chain, partial [Rattus norvegicus]
VIPEVTVLPKSPVNLGEPNILICFIDKFSPPAVNVTWLRNGQPVTKGVSETVFLPREDHLFRKFHYLTFLPSVEDYYDCE
VDHWGLEEPLRKHWEFEEKTLLPETKENVLCVLGLFVGLVGIVVGIVLIIKGLRKRNAVERQGAL
>gi|4928091|gb|AAD33402.1|AF129116_1 MHC class II antigen, partial [Ovis aries]
QYTQEFDGDELLYVDLEKKETVWRLPMFGELTSFDPQGALSNIATEKHNLDIMIKRSNFTPVINEVPEVTVFSKSPVMLG
QPNTLICHVDNIFPPVINITWLKNGHAVTEGVSETSFLPKDDHSFLKIGYLTFLPSDDDIYDCKVEHW
>gi|35187024|gb|AAQ84180.1| MHC class II antigen [Homo sapiens] >gi|35187026|gb|AAQ84181.1| MHC class II antigen [Homo sapiens] >gi|35187028|gb|AAQ84182.1| MHC class II antigen [Homo sapiens] >gi|35187032|gb|AAQ84184.1| MHC class II antigen [Homo sapiens] >gi|35187034|gb|AAQ84185.1| MHC class II antigen [Homo sapiens] >gi|35187036|gb|AAQ84186.1| MHC class II antigen [Homo sapiens]
PPEVTVFPKEPVELGQPNTLICHIDRFFPPVLNVTWLCNGEPVTEGVAESLFLPRTDYSFHKFHYLTFVPSAEDVYDCRV
EHWGLDQPLLKHW
>gi|655348966|gb|AIC84033.1| MHC class II antigen A alpha isoform-004 [Mus musculus]
MPRSRALILGVLALTTMLSLCGGEDDIEEAPQATVFPKSPVLLGQPNTLICFVDNIFPPVINITWLRNSKSVTDGVYETS
FLVNRDHSFHKLSYLTFIPSDDDIYDCKVEHWGLEEPVLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTIFIIQG
LRSGGTSRHPGPL
>gi|4928093|gb|AAD33403.1|AF129117_1 MHC class II antigen, partial [Ovis aries]
QYTQEFDGDELFYVDLGKKETVWRLPMFGEFTSFDPQGALSEIATAKQNLDIMIKRSNFTPVINEVPEVTVFSKSPVMLG
QPNTLICHVDNIFPPVINITWLKNGHAVTEGVSETSFLPKDDHSFLKIGYLTFLPSDDDVYDCKVEHW
>gi|35187040|gb|AAQ84188.1| MHC class II antigen [Homo sapiens]
PPEVTVFPKEAVELGQPNTLICHIDKFFPPVLNVTWLCNGEPVTEGVAESLFLPRTDYSFHKFHYLTFVPSAEDVYDCRV
EHWGLDQPLLKHW
>gi|4928107|gb|AAD33410.1|AF129124_1 MHC class II antigen, partial [Ovis aries] >gi|4928109|gb|AAD33411.1|AF129125_1 MHC class II antigen, partial [Ovis aries]
QYTQEFDGDELFYVDLGKKETVWRLPMFSQFAGFDPQGALSEIATAKQNLDILTKRSNFTPAINEVPEVTVFSKSPVMLG
QPNTLICHVDNIFPPVINITWLKNGHAVTEGVSETSFLPKDDHSFLKIGYLTFLPSDDDVYDCKVEHW
>gi|187939|gb|AAA59708.1| HLA-DQA2, partial [Homo sapiens]
SKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGHAVTEGVSETSFLSKSDHSFFKISYLTFLPSADEIYDCKVEHWGLDQ
PLLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTVFIIQGLRSVGASRHQGPL
>gi|187937|gb|AAA59707.1| MHC class II DQ-alpha protein, partial [Homo sapiens]
SKSPVTLGQPNTLICLVDNIFPPVVNITWLSNGQSVTEGVSETSFLSKSDHSFFKISYLTFLPSADEIYDCKVEHWGLDQ
PLLKHWEPEIPAPMSELTETVVCALGLSVGLMGIVVGTVFIIQGLRSVGASRHQGPL
>gi|4928099|gb|AAD33406.1|AF129120_1 MHC class II antigen, partial [Ovis aries]
QYTQEFDGDELFYVDLGKKETVWRLPMFGEFTSFDPQGALSEIAKAKQTLDIMIKRSNFTPVINEVPEVTVFSKSPVMLG
QPNTLICHVDNIFPPVINITWLKNGHAVTEGVSETSFLPKDDHSFLKIGYLTFLPSDDDVYDCKVEHW
>gi|4928095|gb|AAD33404.1|AF129118_1 MHC class II antigen, partial [Ovis aries]
QYTQEFDGDELLYVDLGKKETVWRLPMFSQFADFDPQGALRNIATAKDTLDILTKRSNSTPVINEVPEVTVFSKSPVMLG
QPNTLICHVDNIFPPVINITWLKNGHVVTEGVSETSFLPKDDDSFFKFGYLTFLPSDDDVYDCKVEHW
>gi|390196830|gb|AFL70510.1| MHC class II protein, partial [Macaca fascicularis] >gi|390196832|gb|AFL70511.1| MHC class II protein, partial [Macaca fascicularis] >gi|390196834|gb|AFL70512.1| MHC class II protein, partial [Macaca fascicularis] >gi|390196836|gb|AFL70513.1| MHC class II protein, partial [Macaca fascicularis] >gi|390196838|gb|AFL70514.1| MHC class II protein, partial [Macaca fascicularis] >gi|390196840|gb|AFL70515.1| MHC class II protein, partial [Macaca fascicularis] >gi|390196842|gb|AFL70516.1| MHC class II protein, partial [Macaca fascicularis] >gi|390196844|gb|AFL70517.1| MHC class II protein, partial [Macaca fascicularis] >gi|390196846|gb|AFL70518.1| MHC class II protein, partial [Macaca fascicularis]
EEFGRFASFEAQGALANIAVDKANLEIMTKRSNNTPITNVPPEVTVLTNSPVELGEPNVLICFIDKFSPPVVKVTWLKNG
KPVTTGVSETVFLPREDHLFRKFHYLPFLPSTEDIYDCKVEHWGLDAPLLKHW
>gi|110748652|gb|ABG89870.1| MHC class II antigen, partial [Bubalus bubalis]
DHIGTYGINVYHTYGPSGYYTHEFDGDEQFYVDLEKRETVWRLPVFSKFASFDPQGALRNIATEKHNLEIMIQRSNSTAA
TNKVPEVTVFSKSPVMLGQPNTLICHVDNIFPPVVNITWLRNGHSVIEGVSETSFLSKNDFSFSKISYLTFLPSDDD
>gi|289185481|gb|ADC91878.1| MHC class II antigen [Elephas maximus]
DELLYVDLEKKETVWRLPMFSKFASFDPQGGLRNIAVLKHNLDILIKRSNATAATNEVPEVTVFPKSPVTLGQPNLLICL
VDNIFPPVINITWLSNGHTVTEGVAETNFLPKDDHSFSKISYLTFLPSADDVY
>gi|289185467|gb|ADC91871.1| MHC class II antigen [Loxodonta africana]
DELFYVDLEKKETVWRLPMFSKFASFDPQGGLRNIAVLKHNLDILIKRSNSTAAINEVPEVTVFPKSPVTLGQPNLLICF
VDNIFPPVINITWLSNGHTVTQGVAETNFLPKDDHSFSKISYLTFLPSADDVY
>gi|62087912|dbj|BAD92403.1| major histocompatibility complex, class II, DR alpha precursor variant [Homo sapiens]
PHSRALLTPNRAPKKKMAISGVPVLGFFIIAVLMSAQESWAIKEEHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKK
ETVWRLEEFGRFASFEAQGALANIAVDKANLEIMTKRSNYTPITNVPPEVTVLTNSPVELREPNVLICFIDKFTPPVVNV
TWLRNGKPVTTGVSETVFLPREDHLFLTPHLIHFYLTSPIPSPLVGIPNETFFPSLLRKIIIAYILLYYRV
>gi|113015516|gb|ABI29906.1| MHC class II antigen, partial [Bubalus bubalis]
DHVGSYGTEIYQSHGPSGQYTQEFDGDEMFYVDLGKKETVWRLPMFSQFAGFDPQAALSEIATTKHNLDVLTKRSNFTPV
INEVPEVTVFSKSPVMLGQPNTLICHVDNIFPPVINITWLKNGHSVTEGVSETSFLSKDDHSFLKIGYLTFLPSDDD
>gi|62087696|dbj|BAD92295.1| HLA-DPA1 protein variant [Homo sapiens]
RPHNMRPEDRMFHIRAVILRALSLAFLLSLRGAGAIKADHVSTYAAFVQTHRPTGEFMFEFDEDEQFYVDLDKKETVWHL
EEFGRAFSFEAQGGLANIAILNNNLNTLIQRSNHTQAANGTAYLCLFLCSPTGRDERASLPPSD
>gi|289185469|gb|ADC91872.1| MHC class II antigen [Loxodonta africana]
DELLYVDLEKKETVWRLLMFSKFASLDPQGGLRNIAVLKHNLDILIKRSNATAATNEVPEVTVFPKSPVTLGQPNLLICL
VDNIFPPVINITWLSNGHTVTEGVAETNFLPKDDHSFSKISYLTFLPSADDVY
>gi|4928097|gb|AAD33405.1|AF129119_1 MHC class II antigen, partial [Ovis aries]
QYTQEFDGDELFYVDLEKKETVWRLPMFSQFAGFNIQDALNNIPAAKHNLGILTKRSNFTPVINEVPEVTVFSKSPMMLG
QPNTLICHVDNIFPPVINITWLKNGHAVTEGVYATSFLPKDDHSFFKIGYLTFLPSDDDVYDCKVEHW
>gi|110748648|gb|ABG89868.1| MHC class II antigen, partial [Bubalus bubalis]
DHIGAYGINVYHSYGPSGYYTHEFDGDEEFYVDLEKKETVWHLPLFSKFRSFDPQGALRNIAIVKYNLEIMIQESNSTAA
TNKVPEVTVFSKSPVMLDQPNTLICHVDNIFPPVISITWLRNGHSVIEGVSEASFLSKDDHSFSKISYLTFLPSDDD
>gi|110748646|gb|ABG89867.1| MHC class II antigen, partial [Bubalus bubalis]
DHIGAYGINVYHSYGPSGYYTHEFDGDEEFYVDLEKKETVWHLPLFSKFRSFDPQGALRNIAIVKYNLEIMIQESNSTAA
TNKVPEVTVFSKSPVMLDQPNTLICHVDNIFPPVISITWLRNGHSVIEGVSETSFLSKDDHSFSKISYLTFLPSDDD
>gi|289185471|gb|ADC91873.1| MHC class II antigen [Loxodonta africana]
DELFYVNLEKKETVWRLPMFSKFAGFDPQGGLRNIAVLKHNLDILIKRSNSTAATNEVPEVTVFPKSPVTLGQPNLLICF
VDNIFPPVINITWLSNGHTVTEGVAETNFLPKDDHSFSKISYLTFLPSDDDVY
>gi|71066949|gb|AAZ22693.1| MHC class II antigen [Bubalus bubalis]
TYGPSGYYTHEFDGDEEFYVDLEKKETVWHLPLFSKFRSFDPQGALRNIAIVKYNLEIMIQESNSTAATNKVPEVTVFSK
SPVMLDQPNTLICHVDNIFPPVISITWLRNGHSVIEGVSETSFLSKDDHSFSKISYLTFLPSDDD
>gi|4928101|gb|AAD33407.1|AF129121_1 MHC class II antigen, partial [Ovis aries] >gi|4928103|gb|AAD33408.1|AF129122_1 MHC class II antigen, partial [Ovis aries] >gi|4928105|gb|AAD33409.1|AF129123_1 MHC class II antigen, partial [Ovis aries]
QYTQEFDGDELFYVDLGKKETVWRLPMFSQFAGFDPQRAVIQLATSKHNLDYMTKHSNFTHAINEVPEVTVFSKSPVMLG
QPNTLICHVDNIFPPVINITWLKNGHAVMEGVSETSFLSKDDHSFLKIGYLTFLPSDDDIYDCKVEHW
>gi|113015476|gb|ABI29904.1| MHC class II antigen [Bubalus bubalis]
DHVGSYGTEIYQSHGPPDQYTQEFDGDEMFYVDLGKKETVWRLPMFSQFAGFDPQAALSEIATTKHNLDVLTKRSNFTPV
INEVPEVTVFSKSPVMLGQPNTLICHVDNIFPPVINITWLKNGHSVTEGVSETSFLFKDDHSFLKIGYLTFLPSDDD
>gi|289185473|gb|ADC91874.1| MHC class II antigen [Loxodonta africana]
DELFYVNLEKKETVWRLPMFSKFAGFDPQGGLRNIAVLKHNLDILIKLSNSTAATNEVPEVTVFPKSPVTLGQPNLLICF
VDNIFPPVINITWLSNGHTVTEGVAETNFLPKDDHSFSKISYLTFLPSDDDVY
>gi|113015495|gb|ABI29905.1| MHC class II antigen, partial [Bubalus bubalis]
DHIGAYGINVYHSYGPSGYYTHEFDGDEEFYVDLEKKETVWHLPLFSKFASFDPQGALRNIANAKYNLEFMIQESNSTAA
TNKVPEVTVFSKSPVMLDQPNTLICHVDNIFPPVISITWLRNGHSVIEGVSETSFLSKDDHSFSKISYLTFLPSDDD
>gi|205408|gb|AAA41598.1| MHC RT1-B A-alpha chain, partial [Rattus norvegicus] >gi|205418|gb|AAA41601.1| MHC Ia-A alpha chain, partial [Rattus norvegicus] >gi|224649|prf||1109294A antigen RT1 Aalpha C term
QPNTLICFVDNIFPPVINITWLRNSKPVTEGVYETSFLSNPDHSFHKMAYLTFIPSNDDIYDCKVEHWGLDEPVLKHWEP
EVPAPMSELTETVVCALGLSVGLVGIVVGTIFIIQGLRSDGPSRHPGPL
>gi|161334056|gb|ABX60877.1| MHC class II antigen [Cephalorhynchus hectori]
TTIYQSFGPSGQYTQEFDGDELFYVDLEKKETVWRLPVFSEFAGFDPQGALRNIAVAKHNLDIMIKRSNFTPVTNEVPEV
TVFSKFPVLLRQPNTLICLVDNIYPPVINITWLRNGHTVREGVSEISFLTKNDLSFLKISYLTFLPSDDDVY
>gi|311027|gb|AAC37319.1| MHC class II DN-alpha-1, partial [Macropus eugenii]
DELFYVDLQKKETVWRLPEFSHFSSFDPQGGLREKATCKYNLDILIKRSNRSRAISVPPEVTVFSESPVELGQPNVLICL
VDNIFPPVVNIKWLRNGQVITTGVSETDFYSRPDHKFRKFYYLTFLPNTEDFY
>gi|110748650|gb|ABG89869.1| MHC class II antigen, partial [Bubalus bubalis]
DHIGSYGTEIYQSHGPPGQYTQEFDGDELFYVDLGKETVWRLPMFSQFAGFDPQAALSEIAKAKHNLDVLTKRSNFTPVI
NEVPEVTVFSKSPMVLGQPNILICHMDNIFPPVINITWLKNGHAVIEGVSETSFLPKDDHSFLKIGSLTFLPSDDD
>gi|311029|gb|AAC37320.1| MHC class II DN-alpha-1, partial [Macropus eugenii]
DELFYVDLQRKETVWRLPEFSHFSSFDPQGGLREKATCRYNLDILIKRSNRSRAISVPPEVTVFSESPVELGQPNVLICL
VDNIFPPVVDIKWLRNGQVITTGVSETDFYSRPDHKFRKFHYLTFLPNTEDFY
>gi|311033|gb|AAA31599.1| MHC class II DN-alpha-2, partial [Macropus eugenii]
DEEFYVDLQKKETVWRLPEFSHFASFDPQGGLREIATSKYNLDILIKRSNRSRAISVPPEVTVFSESPVEIDQPNVLICL
VDNIFPPVINITWFRNGQLVTTGVSETNFYTRPDHKFRKFYYLTFLPNTEDFY
>gi|161334076|gb|ABX60887.1| MHC class II antigen [Globicephala macrorhynchus]
DELFYVDLEKKETVWRLPVFSEFAGFDPQGALRNIAVVKHNLDILIKRSNFTPVTNEVPEVTVFSKFPVLLHQPNTLICL
VDNIYPPVINITWLRNGHTVREGVSEISFLTKNDLSFLKISYLTFLPSDDDVYDCK
>gi|1930043|gb|AAB51515.1| major histocompatibility complex class II [Mirounga leonina]
DEEFYVDLEKKETVWQLPMFQTYGRFDPQGALTNLATLKHNLNILTERSNSTAATNEVPEVTVFLKSPAMLGQPNTLICF
VDNIFPPVINVTWLKNRHSVTKGVSETSFLAKRDHSFLKISYLTFLPSADDIY
>gi|161334070|gb|ABX60884.1| MHC class II antigen [Globicephala melas]
DELFYVDLEKKETVWRLPVFSEFTSFDPQGALRNIAVAKHNLDILIKRSNFTPVTNEVPEVTVFSKFPVLLRRPNTLICL
VDNIYPPVINITWLRNGHTVTEGVSEISFLTKNDLSFLKISYLTFLPSDDDVY
>gi|311031|gb|AAA31598.1| MHC class II DN-alpha-1, partial [Macropus eugenii]
ELFYVDLQKKETVWRLPEFSHFSSFDPQGGLREKATCKYNLDILIKRSNRSRAISVPPEVTVFSESPVELGQPNVLICLV
DNIFPPVVNIKWLRNGQVITTGVSETDFYSRPDHKFRKFYYLTFLPNTED
>gi|161334074|gb|ABX60886.1| MHC class II antigen [Delphinus delphis]
DEQFYVDLEKKETVWRLPVFSEFAGFDPQGALRNIAVAKHNLDIMIKRSNFTPVTNEVPEVTVFSKFPVLLRQPNTLICL
VDNIYPPVINITWLRNGHTVREGVSEISFLTKNDLSFLKISYLTFLPSDDDVY
>gi|161334060|gb|ABX60879.1| MHC class II antigen [Tursiops truncatus]
DELFYVDLEKKETVWRLPVFSEFAGFDPQGALRNIAVVKHNLDILIKCSNFTPVTNEVPEVTVFSKFPVLLRQPNTLICL
VDNIYPPVINITWLRNGHTVREGVSEISFLTKNDLSFLKISYLTFLPSDDDVY
>gi|161334072|gb|ABX60885.1| MHC class II antigen [Lagenorhynchus obscurus]
DEQFYVDLEKKETVWRLPVFSEFASFDPQGALRNIAVAKHTLDIMIKRSNFTPVTNEVPEVTVFSKFPVLLRQPNTLICL
VDNIYPPVINITWLRNGHTVREGVSEISFLTKNDLSFLKISYLTFLPSDDD
>gi|242266947|gb|ACS91325.1| MHC class II antigen [Sotalia guianensis]
FYVDLEKKETVWRLPVFSEFTSFDPQGALRNIAVVKHNLDVLIKRSNFTPVTNEVPEVTVFSKFPVLLHQPNTLICLVDN
IYPPVINITWLRNGHTVREGVSEISFLTKNDLSFLKISYLTFLPSDDD
>gi|242266951|gb|ACS91327.1| MHC class II antigen [Sotalia guianensis]
FYVDLEKKETVWRLPVFSEFTSFDPQGALRNIAVAKHNLDILIKRSNFTPVTNEVPEVTVFSKFPVLLRQPNTLICLVDN
IYPPVINITWLRNGHTVREGVSEISFLTKNDLSFLKISYLTFLPSDDD
>gi|242266949|gb|ACS91326.1| MHC class II antigen [Sotalia guianensis]
FYVDLEKKETVWRLPVFSEFASFDPQGALRNIAVAKHNLDIMIKRSNFTPVTNEVPEVTVFSKFPVLLRQPNTLICLVDN
IYPPVINITWLRNGHTVREGVSEISFLTKNDLSFLKISYLTFLPSDDD
>gi|7548411|gb|AAD14359.2|S81351_1 unknown [Rangifer tarandus]
GKKETVWRLPMFGDLTSFDPQSALSEIVKSKHNLDVMTKRSNFTPAINEVPEVTVFSKSPVMLGQPNTLICHVDNIFPPV
INITWLRNGHSVTEGVSETSFLPKSDFSFLKIGYLTFLPSDDDV
>gi|12667083|emb|CAC28142.1| MHC class II antigen, alpha chain [Rattus norvegicus]
VIRFFFMAVLMSPQKSWAIREEHTIIQAEFYLSPDQNGEFMFDFDGDEIFHVDIKKSETIWRLEEFAQFASFEAQGALAN
IAVDKANLDIMIKRSNNTPDANVIPEVTVLPKSPVNLGEPNILICFIDKFSPPAVNVT
>gi|3757788|gb|AAC64233.1| MHC class II antigen [Homo sapiens]
TFCRVFLYFLYAADHVSTYAMFVQTHRPTGEFMFEFDEDEMFYVDLDKKETVWHLEEFGQAFSFEAQGGLANIAILNNNL
NTLIQRSNHTQATNGTPYLCLFLCSPTG
>gi|48857017|gb|AAT47114.1| MHC class II antigen [Bos taurus]
PPEVTLLPNKPVELGEPNTLICFIDKFSPPVISVTWLRNGKPVTDGVSQTVFLPRNDHLFRKFHYLPFLPTTEDVYDCKV
EHLGLNEPLLKHWEYEAPAP
>gi|560959515|ref|XP_006202211.1| PREDICTED: mamu class II histocompatibility antigen, DR alpha chain-like [Vicugna pacos]
MVMTGVPVLGVFITVLMRLQGSWAIKEEHVIIQAEFYLNPDKSGEFMFDFDGDEIFHVDLEKKETVWRLEEFGRFASFEA
QGALANIAVDKANLDIMIKRSNHTPNTNVPPEVTVLPNTRVELGEPNTLICFIIKGVRKGNAAERRGPL
>gi|5381293|gb|AAD42927.1| MHC class II antigen [Homo sapiens]
HVSTYAAFVQTHRPTGEFMFEFDEDEMFYVDLDKKETVWHLEEFGQTFSFEAQGGLANIAILNNNLNTLIQRSNHTQATN
GTPYLCLFLCSPT
>gi|5381295|gb|AAD42928.1| MHC class II antigen [Homo sapiens]
HVSTYAAFVQTHRPTGEFMFEFDEDEQFYVDLDKKETVWHLEEFGRAFSFEAQGGLANIAILNNNLNTLIQRSNHTQAAN
GTPYLCLFLCSPT
>gi|161334068|gb|ABX60883.1| MHC class II antigen [Stenella longirostris]
VWRLPVFSEFTSFDPQGALRNIAVAKYNLDILIKRSNFTPVTNEVPEVTVFSKFPVLLRQPNTLICLVDNIYPPVINITW
LRNGHTVREGVSEISFLTKNDLSFLKISYLTFLPSDDDVY
>gi|40287284|gb|AAR83771.1| MHC class II antigen [Cryptomys hottentotus hottentotus]
VPEVTVLPKSPVMLGQPNILICVVDNVFPPVINITWLSNGRLVTEGISETSFLSKSDHSFQKIAYLTFLPSADDIYDCKV
EHWGSG
>gi|40287300|gb|AAR83779.1| MHC class II antigen [Fukomys damarensis] >gi|40287316|gb|AAR83787.1| MHC class II antigen [Heliophobius argenteocinereus] >gi|40287318|gb|AAR83788.1| MHC class II antigen [Heliophobius argenteocinereus]
VPEVTVLPKSPVMLGEPNTLICVVDNIFPPVINITWLSNGRLVTEGISETSFLSKSDHAFQKIAYLTFLPSADDIYDCKV
EHWGSG
>gi|40287302|gb|AAR83780.1| MHC class II antigen [Fukomys damarensis]
VPEVIVLPKSPVVLGQPNTLICVVDNIFPPVINITWLSNGHLVTEGISETSFLSKSDHSFQKIAYLTFLPSADDIYDCKV
EHWGSG
>gi|40287322|gb|AAR83790.1| MHC class II antigen [Heliophobius argenteocinereus]
VPEVTVLPKSPVMLGEPNTLICVVDNIFPPVINITWLSNGRLVTEGISETSFLSKSDHAFQKIAYLTFLPSADDIYDCKV
EHWGSI
>gi|40287320|gb|AAR83789.1| MHC class II antigen [Heliophobius argenteocinereus]
VPEVTVLPKSPVMLGEPNTLICVVDNIFPPVINITWLSNGRLVTEGISETSFLSKSDHAFQKIAYLTFLPSADDIYDCKV
EHWGSE
>gi|40287294|gb|AAR83776.1| MHC class II antigen [Fukomys damarensis] >gi|40287312|gb|AAR83785.1| MHC class II antigen [Heliophobius argenteocinereus] >gi|40287314|gb|AAR83786.1| MHC class II antigen [Heliophobius argenteocinereus]
VPEVTVLPKSPVMLGEPNTLICVVDNIFPPVINITWLNNGRLVTEGISETSFLSKSDHAFQKIAYLTFLPSADDIYDCKV
EHWGSG
>gi|40287296|gb|AAR83777.1| MHC class II antigen [Fukomys damarensis]
VPEVTVLPKPPVMLGEPNTLICVVDNIFPPVINITWLNNGRLVTEGISETSFLSKSDHAFQKIAYLTFLPSADDIYDCKV
EHWGSG
>gi|40287286|gb|AAR83772.1| MHC class II antigen [Cryptomys hottentotus hottentotus]
VPEVTVLPKSPVMLGQPNILICVVDNILPPVINITWLNNGRLVTEGISETSFLSKSDHSFQKIAYLTFLPSADDIYDCKV
EHWGSG
>gi|371929155|gb|AEX59170.1| MHC class II antigen, partial [Sus scrofa]
DHVASYGLNVYQSYGPSGYYTHEFDGDEQFYVDLEKKETVWQLPLFSKFTSFDPQGALRNIATAKHNLNTLIKRSNNTAA
VNQVPEVTVFPKSPVMLGQPNTLIC
>gi|371929135|gb|AEX59160.1| MHC class II antigen, partial [Sus scrofa]
DHVASYGLNVYQSYGPSGYYTHEFDGDEQFYVDLEKKETVWQLPLFSKFTSFDPQGALRNIATAKHNLNILIKRSNNTAA
VNQVPEVTVFPKSPVMLGQPNTLIC
>gi|371929147|gb|AEX59166.1| MHC class II antigen, partial [Sus scrofa]
DHVASYGLNVYQSYGPSGYFTHEFDGDEEFYVDLEKKETVWQLPLFSKFRSFDPQGALRNIATAKYNLNILIKRSNNTAA
VNQVPEVTVFPKSPVMLGQPNTLIC
>gi|371929133|gb|AEX59159.1| MHC class II antigen, partial [Sus scrofa]
DHVASYGLNVYQSYGPSGYYTHEFDGDEEFYVDLEKKETVWQLPLFSKFTSFDPQGALRNIATAKHNLNILIKRSNNTAA
VNQVPEVTVFPKSPVMLGQPNTLIC
>gi|371929159|gb|AEX59172.1| MHC class II antigen [Sus scrofa]
DHVASYGLNVYQSYGPSGYYTHEFDGDEQFYVDLEKKETVWRLPLFSEFTSFDPQGALRNIATLKHNLNIVTKRSNNTAA
VNQVPEVTVFPKSPVMLGQPNTLIC
>gi|371929143|gb|AEX59164.1| MHC class II antigen, partial [Sus scrofa]
DHVASYGLNVYQSYGPSGYYTHEFDGDEEFYVDLGKKETVWQLPLFSKFRSFDPQGALRNIATAKHNLNILIKRSNNTAA
VNQVPEVTVFPKSPVILGQPNTLIC
>gi|70608531|gb|AAZ04541.1| MHC class II antigen [Bos taurus x Bos indicus] >gi|167989731|gb|ACA13570.1| MHC class II antigen DQ-alpha chain [Bos indicus]
DHIGTYGISIYHTYGPSGYYTHEFDGDEEFYVDLEKRETVWRLPVFSKFTSFDPQGALRNIAIVKHNLEIVIQRSNSTAA
TNKVPEVTVFSKSPVMLGQPNTLIC
>gi|371929139|gb|AEX59162.1| MHC class II antigen, partial [Sus scrofa]
DHVASYGLNVYQSYGPSGYYTHEFDGDEQFYVDLEKKETVWQLPLFSKFTSFDPQGALRNIATAKHNLNILIKRSNNTAA
VNQVPEVTVFSKSPVILGQPNTLIC
>gi|371929157|gb|AEX59171.1| MHC class II antigen, partial [Sus scrofa]
DHVASYGLNVYQSYGPRGYFTHEFDGDEQFYVDLEKKETVWRLPLFSEFTSFDPQGALRNIATLKHNLNIVTKRSNNTAA
VNKVPEVTVFSKSPVILGQPNTLIC
>gi|371929151|gb|AEX59168.1| MHC class II antigen, partial [Sus scrofa]
DHVASYGLNVYQSYGPSGYFTHEFDGDEEFYVDLEKKETVWRLPLFSEFTSFDPQGALRNIATLKHNLNIVTKRSNNTAA
VNQVPEVTVFSKSPVILGQPNTLIC
>gi|371929145|gb|AEX59165.1| MHC class II antigen, partial [Sus scrofa]
DHVASYGLNVYQSYGPSGYYTHEFDGDEEFYVDLEKKETVWQLPLFSKFTSFDPQGALRNIATLKHNLNIVTKRSNNTAA
VNKVPEVTVFSKSPVILGQPNTLIC
>gi|371929161|gb|AEX59173.1| MHC class II antigen [Sus scrofa]
DHVASYGLNVYQSYGPSGYYTHEFDGDEEFYVDLEKKETVWRLPLFSEFTSFDPQGALRNIATLKHNLNIVTKRSNNTAA
VNKVPEVTVFSKSPVILGQPNTLIC
>gi|371929149|gb|AEX59167.1| MHC class II antigen, partial [Sus scrofa]
DHVASYGLNVYQSYGPSGYYTHEFDGDEEFYVDLEKKETVWRLPLFSEFTSFDPQGALRNIATLKHNLNIVTKRSNNTAA
VNQVPEVTVFSKSPVILGQPNTLIC
>gi|371929163|gb|AEX59174.1| MHC class II antigen [Sus scrofa]
DHVASYGLHVYHSYGPSGYYTHEFDGDEQFYVDLEKKETVWRLPLFSKFTSFDPQGALRNIATSKYNLNVMIKQSNNTAA
VNQVPEVTVFPKSPVILGQPNTLIC
>gi|371929131|gb|AEX59158.1| MHC class II antigen, partial [Sus scrofa]
DHVASYGLNVYQSYGPRGYYTHEFDGDEQFYVDLEKKETVWRLPLFSEFTSFDPQGALRNIATLKHNLNIVTKRSNNTAA
VNKVPEVTVFSKSPVILGQPNTLIC
>gi|161334066|gb|ABX60882.1| MHC class II antigen [Balaena mysticetus]
ETVWRLPVFSQFAGFDPQGALRNIAVGKHNLDILIKRSNFTPVTNEVPEVTVFSKFPVSLHQPNTLICLVDNIYPPVINI
TWLRNGHSVREGVSEISFLPKND
>gi|70608533|gb|AAZ04542.1| MHC class II antigen [Bos taurus x Bos indicus] >gi|70608539|gb|AAZ04545.1| MHC class II antigen [Bos taurus x Bos indicus] >gi|78059486|gb|ABB18112.1| MHC class II antigen [Bos taurus x Bos indicus] >gi|78059488|gb|ABB18113.1| MHC class II antigen [Bos taurus x Bos indicus] >gi|78059490|gb|ABB18114.1| MHC class II antigen [Bos taurus x Bos indicus]
DHIGTYGISIYHTYGPSGYYTHEFDGDEEFYVDLEKRETVWRLPVFSKFATFDPQGALRNIATSKHDLEVLIQRSNSTAA
TNKVPEVTVFSKSPVMLGQPNTLIC
>gi|167989733|gb|ACA13571.1| MHC class II antigen DQ-alpha chain [Bos indicus]
DHVGSYGTEIYQSHGPSGQYTQEFDGDEMFYVDLGKKETVWRLPMFSQFAGFDPQAALSEIATAKHNLDVLTKRSNFTPV
INEVPEVTVFSKSPVMLGQPNTLIC
>gi|70608535|gb|AAZ04543.1| MHC class II antigen [Bos taurus x Bos indicus]
DHVGSYGTEIYQSHGPSGQYTQEFDGDEMFYVDLGKKETVWRLPMFSQFAGFDPQAALSEIATSKHNLDVLTKRSNFTPV
INEVPEVTVFSKSPVMLGQPNTLIC
>gi|70608529|gb|AAZ04540.1| MHC class II antigen [Bos taurus x Bos indicus] >gi|70608537|gb|AAZ04544.1| MHC class II antigen [Bos taurus x Bos indicus]
DHVGSYGTEIYQSHGPSGQYTQEFDGDEMFYVDLGKKETVWRLPMFSQFAGFDPQAALSEIATAKHNLDVLTKRSNFTPV
INGVPEVTVFSKSPVMLGQPNTLIC
>gi|371929137|gb|AEX59161.1| MHC class II antigen, partial [Sus scrofa]
DHVASYGLNVYQSYGPSGYYTHEFDGDEEFYVDLEKKETVWQLPLFRKFRSFDPQGALRNIAVGKLTLNILTKRSNNTAA
VNKVPEVTVFSKSPVILGQPNTLIC
>gi|371929153|gb|AEX59169.1| MHC class II antigen, partial [Sus scrofa]
DHVASYGLNVYQSYGSSGYYTHEFDGDEQFYVDLEKKETVWQLPLFSKFTSFDPQGALRNIAVGKLTLNILTKRSNNTAA
VNKVPEVTVFSKSPVILGQPNTLIC
>gi|371929141|gb|AEX59163.1| MHC class II antigen, partial [Sus scrofa]
DHVASYGLNVYQSYGSSGYYTHEFDGDEQFYVDLEKKETVWKLPLFSKFTSFDPQGALRNIAVGKLTLNILTKRSNNTAA
VNKVPEVTVFSKSPVILGQPNTLIC
>gi|85035302|gb|ABC68943.1| MHC class II antigen [Bos taurus x Bos indicus]
DHIGAYGINVYHTYGPSGYYTHEFDGDEEFYVDLEKRETVWNLPLFSKFRRFDPQGALRNIATVKHNLEIVIQRSNSTAA
TNKVPEVTVFSKSPKMLGQPNTLIC
>gi|161334064|gb|ABX60881.1| MHC class II antigen [Balaenoptera musculus]
ETVWRLPVFSKFTSFDPQGALRNIAVGKYNLDILMKRSNFTPVTNEVPEVTVFSKFPVSLHQPNTLICLVDNIYPPVINI
TWLRNGHSVREGVSEISFLLKND
>gi|167989725|gb|ACA13567.1| MHC class II antigen DQ-alpha chain [Bos indicus]
DHIGAYGINIYHTYGPSGYYTHEFDGDEGFYVDLEKRETVWNLPLFSKFRRFDPQGALRNIATAKHNLEIVIQRSNSTAA
TNKVPEVTVFSKSPMMLGQPNTLIC
>gi|167989721|gb|ACA13565.1| MHC class II antigen DQ-alpha chain [Bos indicus] >gi|167989723|gb|ACA13566.1| MHC class II antigen DQ-alpha chain [Bos indicus]
DHIGAYGINVYHSYGPSGYYTHEFDGDEQFYVDLEKKETVWRLPVFSKFATFDPQGALRNIAVGKQTLEVMIRRSNSTAA
TNKVPEVTVFSKSPMMLGQPNTLIC
>gi|167989729|gb|ACA13569.1| MHC class II antigen DQ-alpha chain [Bos indicus]
DHIGAYGINVYHSYGPSGYYTHEFDGDEEFYVDLEKRETVWNLPLFSKFRRFDPQGALRNIATTKHNLEIMMQRSNSTAA
TNKVPEVTVFSKSPMMLGQPNTLIC
>gi|167989727|gb|ACA13568.1| MHC class II antigen DQ-alpha chain [Bos indicus]
DHIGAYGINIYHTYGPSGYYTHEFDGDEEFYVDLEKRETVWNLPLFSKFRRFDPQGALRNIGTAKHNLEIVIQRSNSTAA
TNKVPEVTVFSKSPMMLGQPNTLIC
>gi|4581767|gb|AAD24764.1|AF110320_1 MHC class II antigen [Bos taurus]
PEESAEFMFDFDGDEIFHVDMGKKETVWRLPEFGHFASFEAQGALANMAVMKANLDIMIKRSNNTPNTNVPPEVTLLPNK
PVELGE
>gi|356707408|gb|AET36879.1| MHC class II antigen DR alpha chain, partial [Taxidea taxus]
DHVIIQAEFYLTPDPSGEFMFDFDGDEIFHVDMEKKETVWRLEEFGRFASFEAQGALANIAVDKANLNIMIKRSNHTPNT
N
>gi|283145456|gb|ADB13147.1| MHC class II antigen, partial [Ailuropoda melanoleuca]
DHVIIQAEFYMTPDPSGEYMFDFDGDEIFHVDLEKKETVWRLEEFGRFASFEAQGALANIAVDKANLDIMIKRSNHTPNT
N
>gi|356707427|gb|AET36883.1| MHC class II antigen, partial [Meles meles]
DHVIIQAEFYLTPDPSGEFMFDFDGDEIFHVDMEKKETVWRLEEFGRFASFEAQGALANIAVDKANLDIMIKRSNHTPNT
N
>gi|55832202|gb|AAV66428.1| MHC class II DQ-alpha chain [Bison bison]
AYGINVYHTYGPSGYFTHEFDGDEEFYVDLEKRETVWRLPVFSKFTSFDPQGALRNIATVKHNLEILIRRSNSTAATNKV
PEMTVFPKSPVMLG
>gi|59011747|gb|AAW83672.1| MHC class II antigen [Sus scrofa]
IQAEFYLSPDKSGEFMFDFDGDEIFHVDMEKRETVWRLEEFGHFASFEAQGALANIAVDKANLEILIKRSNNTPNTNVPP
EVTVLSD
>gi|375126525|gb|AFA35789.1| MHC class II antigen, partial [Bos taurus]
GTYGADFYQSHGPSGQYIHEFDGDELLYVDLEKKETVWRLPMFGELTGFDPQGALSEIASSKHNLDVLTKRSNFTPVINE
VPEVTVFSKSPVMLG
>gi|390627084|gb|AFM28268.1| MHC class II antigen, partial [Ailuropoda melanoleuca]
DHVIIQAEFYMTPDLSGEFMFDFDGDEIFHVDLEKKETVWRLEEFGRFASFEAQGALANIAVDKANLDIMIKRSNHTPNT
N
>gi|59011721|gb|AAW83671.1| MHC class II antigen [Sus scrofa]
IQAEFYLSPDKSGEFMFDFDGDEIFHVDMEKRETVWRLEEFGHFASFEAQGALANIAVDKANLEIMIKRSNNTPNTNVPP
EVTVLSD
>gi|45724977|emb|CAG23900.1| MHC class II antigen [Mus musculus]
ADHVGTYGISVYQSPGDIGQYTFEFDGDELFYVDLDKKETVWMLPEFGQLASFDPQGGLQNIAVVKHNLGVLTKRSNSTP
ATNGTCSHP
>gi|55832208|gb|AAV66431.1| MHC class II DQ-alpha chain [Bison bison]
SYGTEIYQSHGPSGQYTHEFDGDELFYVDLGKKETVWRLPMFGDLTSFDPQGALSEIATSKHNLDILTRRSNFTPAINKV
PEVTVFSKSPVVLG
>gi|335347100|gb|AEH41999.1| MHC class II antigen [Equus burchellii]
DHVIIQAEFYLNPDDSGEFMFDFDGDEIFHVDMDKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMIKRSNNTPNT
N
>gi|410061106|gb|AFV53464.1| MHC class II antigen, partial [Phascolarctos cinereus]
ADHVGIYGTNMYQSYGPSGQYTHEFDGDELFYVDLQKKETVWRLPEFSHFESFDPQGGLRNIAILKNNLDILIKRSNRTR
AIS
>gi|304561087|gb|ADM43547.1| MHC class II antigen, partial [Equus asinus]
DHVIIQAEFYLNPGDSGEFMFDFDGDEIFHVDMDKKETVWRLEEFGRFASFEAQGALANIAVDKANLENMMKRSNNTPNT
N
>gi|23305891|gb|AAN17332.1| MHC class II DR-alpha [Equus asinus] >gi|197313052|gb|ACH63255.1| MHC class II antigen [Equus zebra hartmannae] >gi|197313054|gb|ACH63256.1| MHC class II antigen [Equus burchellii boehmi] >gi|197313056|gb|ACH63257.1| MHC class II antigen [Equus zebra hartmannae] >gi|197313058|gb|ACH63258.1| MHC class II antigen [Equus burchellii] >gi|197313070|gb|ACH63264.1| MHC class II antigen [Equus burchellii antiquorum] >gi|197313072|gb|ACH63265.1| MHC class II antigen [Equus kiang] >gi|197313074|gb|ACH63266.1| MHC class II antigen [Equus hemionus]
DHVIIQAEFYLNPDDSGEFMFDFDGDEIFHVDMDKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMMKRSNNTPNT
N
>gi|976286|gb|AAC41631.1| MHC class II DR-alpha, partial [Equus asinus] >gi|38153703|emb|CAE01356.1| MHC class II antigen [Equus caballus] >gi|38153709|emb|CAE01359.1| MHC class II antigen [Equus asinus] >gi|38153711|emb|CAE01360.1| MHC class II antigen [Equus burchellii boehmi] >gi|197313050|gb|ACH63254.1| MHC class II antigen [Equus grevyi] >gi|197313064|gb|ACH63261.1| MHC class II antigen [Equus zebra] >gi|197313066|gb|ACH63262.1| MHC class II antigen [Equus zebra] >gi|197313068|gb|ACH63263.1| MHC class II antigen [Equus grevyi] >gi|218533568|gb|ACK86970.1| MHC class II antigen, partial [Equus asinus] >gi|335347096|gb|AEH41997.1| MHC class II antigen [Equus burchellii] >gi|335347098|gb|AEH41998.1| MHC class II antigen [Equus burchellii] >gi|335347102|gb|AEH42000.1| MHC class II antigen [Equus burchellii]
DHVIIQAEFYLNPGDSGEFMFDFDGDEIFHVDMDKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMMKRSNNTPNT
N
>gi|976285|gb|AAC41630.1| MHC class II DR-alpha, partial [Equus caballus] >gi|357381838|gb|AET75160.1| MHC class II antigen [Equus caballus]
DHVIIQAEFYLKPGDSGEFMFDFDGDEIFHVDMDKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMMKRSNNTPNT
N
>gi|38153707|emb|CAE01358.1| MHC class II antigen [Equus asinus] >gi|197313060|gb|ACH63259.1| MHC class II antigen [Equus burchellii burchellii] >gi|197313062|gb|ACH63260.1| MHC class II antigen [Equus burchellii] >gi|197313076|gb|ACH63267.1| MHC class II antigen [Equus zebra] >gi|224037839|gb|ACN38065.1| MHC class II antigen [Equus kiang]
DHVIIQAEFYLNPGDSGEFMFDFDGDEIFHVDMDKKETVWRLEEFGRFTSFEAQGALANIAVDKANLEIMMKRSNNTPNT
N
>gi|357381836|gb|AET75159.1| MHC class II antigen [Equus caballus]
DHVIIQAEFYLKPGDSGEFMFDFDGDEIFHVDMDKKETVWRLEEFGRFTSFEAQGALANIAVDKANLEIMMKRSNNTPNT
N
>gi|410061108|gb|AFV53465.1| MHC class II antigen, partial [Phascolarctos cinereus]
ADHVGIYGTNIYQSYGPSGQFAHEFDGDELFYVDLQKKETVWRLPEFSHFESFDPQGGLRNIAILKHNLDILIKRSNRTR
AIS
>gi|38153705|emb|CAE01357.1| MHC class II antigen [Equus asinus] >gi|335347104|gb|AEH42001.1| MHC class II antigen [Equus burchellii]
DHVIIQAEFYLNPGDSGEYMFDFDGDEIFHVDMDKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMMKRSNNTPNT
N
>gi|976288|gb|AAC41633.1| MHC class II DR-alpha, partial [Equus hemionus]
DHVIIQAEFYLNPGDSGEFMFDFDGDEIFHVDMDKKETVWRLEEFGHFASFEAQGALANIAVDKANLEIMMKRSNNTPNT
N
>gi|224831204|gb|ACN66628.1| MHC class II antigen [Equus caballus] >gi|357381840|gb|AET75161.1| MHC class II antigen [Equus caballus]
DHVIIQAEFYLKPGDSGEYMFDFDGDEIFHVDMDKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMMKRSNNTPNT
N
>gi|976287|gb|AAC41632.1| DRA, partial [Equus caballus]
DHVIIQAEFYLKPGDSGEFMFDFDGDEIFHVDMDKKETVWRLEEFGHFASFEAQGALANIAVEKANLEIMMKRSNNTPNT
N
>gi|220981812|emb|CAX17698.1| MHC class II antigen [Vicugna pacos]
EHVIIQAEFYLNPDKSGEFMFDFDGDEIFHVDLEKKETVWRLEEFGRFASFEAQGALANIAVDKANLDIMIKRSNHTPNT
N
>gi|55832192|gb|AAV66423.1| MHC class II DQ-alpha chain [Bison bison]
AYGINVYHTYGPSGYYTHEFDGDEEFYVDLEKRETVWNLPLFSKFRRFDPQGALRNIATVKHNLEVLIQRSNSTAATNKV
PEVTVFSKSPMMLG
>gi|296474348|tpg|DAA16463.1| TPA: MHC class II antigen-like [Bos taurus]
MVLNRALILGALALTTMMSPSGGKDVVADHVGSYGTVISQSHGPSDQYTQEFDGDKLFYVDLEKKETVWRLPMFSQFASF
DPQAILRNIAISKHNLNIMIKYSNFIPAIN
>gi|55832204|gb|AAV66429.1| MHC class II DQ-alpha chain [Bison bison]
SYGTEIYQSHGPSGQYTQEFDGDEMFYVDLGKKETVWRLPMFSQFAGFDPQAALSEIATSKHNLDVLTKRSNFTPVINEV
PEVTVFSKSPVMLG
>gi|220981818|emb|CAX17701.1| MHC class II antigen [Physeter catodon]
DHVIIQAEFSLAPDQSSEFMFDFDGDEIFHVDLEKKETVWRLKEFGNFASFQAQGALANIAVGKANLDILIKRSNHTPNT
D
>gi|55832190|gb|AAV66422.1| MHC class II DQ-alpha chain [Bison bison]
AYGINVYHSYGPSGYYTHEFDGDEEFYVDLEKRETVWNLPLFSKFRRFDPQGALRNIATAKHNLEVLIQRSNSTAATNKV
PEVTVFSKSPMMLG
>gi|45724991|emb|CAG23907.1| MHC class II antigen [Mus musculus molossinus]
ADHVGTYGISVYQSPGDIGQYTFEFDGDEWFYVDLDKKETVWRLPEFGQLTSFDPQGGLQEIATVKHNLGILTKRSNSTP
ATNGTCSHP
>gi|86517091|gb|ABC96084.1| MHC class II antigen DQA [Lepus yarkandensis]
ADHVGSYGINVYQSYGPSGQYTHEFDGDEEFYVDLDKKEAIWRLPEFSRFASFDPQGALGNIATAKYNLDTLIKRSNSTA
AVN
>gi|45724975|emb|CAG23899.1| MHC class II antigen [Mus musculus]
ADHVGTYGISVYQSPGDIGQYTFEFDGDELFYVDLDKKETVWRLPEFGQLASFDPQGGLQNIATGKYTLGILTKRSNSTP
ATNGTCSHP
>gi|55832194|gb|AAV66424.1| MHC class II DQ-alpha chain [Bison bison]
AYGINVYHTYGPSGYYTHEFDGDEEFYVDLEKRETVWNLPLFSKFGRFDPQGALRNIATAKHNLEIVIQRSNSTAATNKV
PEVTVFSKSPMMLG
>gi|55832200|gb|AAV66427.1| MHC class II DQ-alpha chain [Bison bison]
AYGINVYHSYGPSGYYTHEFDGDEEFYVDLEKRETVWRLPVFSKFTSFDPQGALRNIAAGKRTLEVMIRRSNSTAATNKV
PEMTVFPKSPIMLG
>gi|86517073|gb|ABC96075.1| MHC class II antigen DQA [Lepus yarkandensis] >gi|86517109|gb|ABC96093.1| MHC class II antigen DQA [Lepus yarkandensis]
ADHVGSYGINVYQSYGPSGQYTHEFDGDEEFYVDLDKKETIWRLPEFSRFASFDPQGALGNIATAKYNLDILIKRSNSTA
AVN
>gi|45724981|emb|CAG23902.1| MHC class II antigen [Mus musculus castaneus]
ADHVGSYGISVYQSPGDIGQFTFEFDGDEWFYVDLDKKETVWMLPEFGQLTSFDPQGGLQNIATGKHNLEILTKRSNSTP
ATNGTCSHP
>gi|50402013|gb|AAT76515.1| MHC class II antigen [Capra hircus]
DHIGTYGISIYQTYGPSGYYTHEFDGDEEFYVDLEKRETVWRLPEFSKFASFDPQGALRNIATIKHNLEVLIQRSNSTAA
TN
>gi|55832198|gb|AAV66426.1| MHC class II DQ-alpha chain [Bison bison]
AYGINVYHSYGPSGYYTHEFDGDEQFYVDLEKKETVWRLPVFSKFATFDPQGALRNIAVGKQTLEVMIRRSNSTAATNKV
PEVTVFSKSPMMLG
>gi|188038028|gb|ACD46645.1| MHC class II antigen [Trichosurus vulpecula] >gi|188038030|gb|ACD46646.1| MHC class II antigen [Trichosurus vulpecula] >gi|188038032|gb|ACD46647.1| MHC class II antigen [Trichosurus vulpecula]
NHVIIQAEFYQTHNPSGEFMFDFDGDEIFHVDLENKQTVWRLPDFSKFASFEAQGALANLAVDKANLEIMMKRSNNTPDT
N
>gi|86517143|gb|ABC96110.1| MHC class II antigen DQA [Lepus yarkandensis] >gi|86517147|gb|ABC96112.1| MHC class II antigen DQA [Lepus yarkandensis]
ADHVGSYGINVYQSYGPSGQYTHEFDGDEEFYVDLDKKETIWRLPEFSRFASFDPQGALGNIATAKYNLDIMIKRSNSTA
AVN
>gi|410061102|gb|AFV53462.1| MHC class II antigen, partial [Phascolarctos cinereus] >gi|410061104|gb|AFV53463.1| MHC class II antigen, partial [Phascolarctos cinereus]
EKHVIIQAEFYQTHDPLGEFMFDFDGDEIFHVDLKSKETVWRLPDFSKFASFEAQGALANLAVDKANLETMMKRSNNTPD
T
>gi|55832196|gb|AAV66425.1| MHC class II DQ-alpha chain [Bison bison]
AYGINVYHTYGPSGYYTHEFDGDEEFYVDLEKRETVWNLPLFSKFRRFDPQGALRNIATVKHNLEIMIQESNSTAATNKV
PEVTVFSKSPMMLG
>gi|55832206|gb|AAV66430.1| MHC class II DQ-alpha chain [Bison bison]
SYGTEIYQSHGPSGQYTQEFDGDELFYVDLGKKETVWRLPMFSQFAGFDPQAALSEIATAKHNLDVLTKRSNFTPVINEV
PEVTVFSKSPMVLG
>gi|6466190|gb|AAF12818.1|AF200221_1 MHC class II antigen [Gorilla gorilla]
EHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMTKRSNYTPIT
N
>gi|188038034|gb|ACD46648.1| MHC class II antigen [Trichosurus vulpecula] >gi|188038036|gb|ACD46649.1| MHC class II antigen [Trichosurus vulpecula]
NHVIIQAEFYQTHNPSGEFMFDFDGDEIFHVDLENKQTVWRLPDFSKFASFEAQGALANLAVDKANLEIMMKRSNNTPDS
N
>gi|50402017|gb|AAT76517.1| MHC class II antigen [Capra hircus]
DHIGTYGISIYQTYGPSGYYTHEFDGDEEFYVDLEKRETVWRLPEFSKFASFDPQGALRNIATTKHNLEVLIQRSNSTAA
TN
>gi|410061110|gb|AFV53466.1| MHC class II antigen, partial [Phascolarctos cinereus]
ADHVGIYGTHMYQSYGPSGQYTHEFDGDELFYVDLQKKETVWRLPEFSHFASFDPQGGLRNIDIAKHNLDILIKRSNRTR
AIS
>gi|45725009|emb|CAG23916.1| MHC class II antigen [Mus musculus domesticus]
ADHVGSYGISVYQSPGDIGQYTFEFDGDELFYVDLDKKETVWMLPEFGQLGSFESQGGLQEIATGKHNLGLLTKRSNFTP
PTNGACSHP
>gi|86517089|gb|ABC96083.1| MHC class II antigen DQA [Lepus yarkandensis]
ADHVGSYGINVYQSYGPSGQYTHEFDGDEEFYVDLDKKETIWRLPEFSRFASIDPQGALGNIATAKYNLDILIKRSNSTA
AVN
>gi|86517111|gb|ABC96094.1| MHC class II antigen DQA [Lepus yarkandensis]
ADHVGSYGINVYQSYGPSGQYTHEFDGDEEFYVDLDKKETIWRLPEFSRFASFDPQGALGNIATAKYNLDILIKRPNSTA
AVN
>gi|45724985|emb|CAG23904.1| MHC class II antigen [Mus musculus]
ADHVGFYGISVYQSPGDIGQYTFEFDGDEWFYVDLDKKETVWRLPEFGQLTSFDPQGGLQEIATVKHNLGILTKRSNSTP
ATNGTCSHP
>gi|86517107|gb|ABC96092.1| MHC class II antigen DQA [Lepus yarkandensis]
ADHVGSYGINVYQSYGPSGQYTHEFDGDEEFYVGLDKKETIWRLPEFSRFASFDPQGALGNIATAKYNLDILIKRSNSTA
AVN
>gi|86517085|gb|ABC96081.1| MHC class II antigen DQA [Lepus yarkandensis]
ADHVGSYGINVYQSYGPSGQYTHEFDGDEEFYVDLDKKETIWRLPEFSRFASFDPQGALGYIATAKYNLDILIKRSNSTA
AVN
>gi|86517075|gb|ABC96076.1| MHC class II antigen DQA [Lepus yarkandensis] >gi|86517127|gb|ABC96102.1| MHC class II antigen DQA [Lepus yarkandensis] >gi|86517137|gb|ABC96107.1| MHC class II antigen DQA [Lepus yarkandensis]
ADHVGSYGINVYQSYGPSGQYTHEFDGDEEFYVDLDKKETVWSLPMFRKFRSFDPQGALGNIATAKYNLDILIKRSNSTA
AVN
>gi|98985884|emb|CAJ58456.1| MHC class II antigen [Canis simensis]
DHVAYYGINVYQSYGPSGQYTHEFDGDELFYVDLEKKETVWRLPVFSTFTSFDPQGALRNLAIAKQNLNILTKRSNQTAA
TN
>gi|40950162|gb|AAR97721.1| major histocompatibility class II DQA1 [Capra hircus]
DHIGIYGVNVYQTYGPSGYYTHEFDGDEEFYVDLEKRETVWRLPEFSKFTSFDPQGALRNIATAKHNLEILIQRSNSTAA
TN
>gi|45725007|emb|CAG23915.1| MHC class II antigen [Mus musculus]
ADHVGSYGISVYQSPGDIGQYTFEFDGDELFYVDLDKKETVWMLPEFAQLRSFEPQGGLQYIATGKHNLEILTKRSNSTP
ATNGTCSHP
>gi|45724993|emb|CAG23908.1| MHC class II antigen [Mus musculus domesticus]
ADHVGFYGISVYQSPGDIGQYTFEFDGDEWFYVDLDKKETVWRLPEFGQLTSFDPQGGLQEIATGKHNLGVLTKRSNSTP
ATNGACSHP
>gi|45724989|emb|CAG23906.1| MHC class II antigen [Mus musculus molossinus]
ADHVGFYGISVYQSPGDIGQYTFEFDGDEWFYVDLDKKETVWRLPEFGQLASFDPQGGLQEIATGKHNLGILTKRSNSTP
ATNGTCSHP
>gi|45724987|emb|CAG23905.1| MHC class II antigen [Mus musculus molossinus]
ADHVGFYGISVYQSPGDIGQYTFEFDGDEWFYVDLDKKETVWRLPEFGQLTSFDPQGGLQEIATGKHNLGILTKRSNSTP
ATNGTCSHP
>gi|166065199|gb|ABY78950.1| MHC class II antigen [Sus scrofa]
ANHVASYGLSVYQSYGPSGYYTHEFDGDEQFYVDLEKKETVWQLPLFSKFTSFDPQGALRNIATAKHNLNILIKRSNNTA
AVN
>gi|146216729|gb|ABQ10565.1| MHC class II antigen DQA [Ailuropoda melanoleuca]
DHVAYYGINFYQSYGPSGQYTHEFDGDELFYVDLEKKETVWRLPMFSTFDTFDPQGALRNLAIAKQNLNILIKLSNYTAA
TN
>gi|45724979|emb|CAG23901.1| MHC class II antigen [Mus spretus]
ADHVGFYGISVYQSPGDIGQYTFEFDGDELFYVDLDKKETVWMLPEFGQLTSFDPQGGLQDIATGKYNLEILIKGSNSTP
ATNGTCSHP
>gi|166065197|gb|ABY78949.1| MHC class II antigen [Sus scrofa]
ANHVASYGLNVYQSYGPSGYYTHEFDGDEQFYVDLEKKETVWQLPLFSKFTSFDPQGALRNIATAKHNLNILIKRSNNTA
AVN
>gi|29501669|gb|AAO74837.1| MHC class II antigen [Ovis aries]
DHIAAYGVNVYQTYGPSGYYTHEFDGDEEFYVDLEKKETVWHLPVFSQFRRFDPQGALRNIATAKHNLEITIQRSNSTAA
TN
>gi|12744481|gb|AAK06651.1|AF317617_1 MHC class II antigen [Ovis aries]
DHIGTYGVNVYQTYGPSGYFTHEFDGDEEFYVDLEKRETVWRLPVFSKFASFDPQGALRNIAVGKQSLEILIQRSNSTAA
TN
>gi|46810507|gb|AAT01636.1| MHC class II antigen [Macaca fascicularis]
EHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMTKRSNNTPIT
N
>gi|223556572|gb|ACM90886.1| MHC class II antigen [Lepus europaeus]
DHVGSYGINLYQSYGPSGQYTHEFDGDEQFYVDLDKKETVWRLPEFSKFTSFDPQGALRNIATTKYNLDIMIKRSNSTAA
V
>gi|2231428|gb|AAB62025.1| MHC class II antigen, partial [Bos taurus] >gi|2231430|gb|AAB62026.1| MHC class II antigen, partial [Bos taurus]
DHIGTYGISIYHTYGPSGYYTHEFDGDEEFYVDLEKRETVWRLPVFSKFTSFDPQGALRNIAIVKHNLEIVIQRSNSTAA
TN
>gi|15081394|gb|AAK83886.1|AF395826_1 MHC class II antigen DQ alpha chain domain 1 [Ovibos moschatus moschatus] >gi|15081396|gb|AAK83887.1|AF395827_1 MHC class II antigen DQ alpha chain domain 1 [Ovibos moschatus wardi] >gi|18266151|gb|AAL67481.1|AF458952_1 MHC class II DQ alpha 1 domain [Alces alces]
DHIGTYGVNVYHTYGPSGHYTHEFDGDEEFYVDLEKRETVWRLPEFSKFTSFDPQGALRNIATVKHNLEILIQRSNSTAA
TN
>gi|189086234|dbj|BAG38535.1| MHC class II antigen [Canis lupus familiaris] >gi|384364911|gb|AFH76340.1| MHC class II antigen, partial [Canis lupus familiaris]
DHVAYYGINVYQSYGPSGQYTHEFDGDEEFYVDLEKKETVWRLPVFSTFTSFDPQGALRNLAIAKQNLNILTKRSNQTAA
TN
>gi|45725001|emb|CAG23912.1| MHC class II antigen [Mus musculus]
ADHVGSYGTTVYQSPGDIGQYTHEFDGDELFYVDLDKKETVWMLPEFAQLRSFEPQGGLQNIAAGKYNLEILIKDSNSTP
ATNGTCSHP
>gi|86517083|gb|ABC96080.1| MHC class II antigen DQA [Lepus yarkandensis]
ADHVGSYGINVYQSYGPSGQYTHEFDGDEEFYVDLDKKETVWSLPMFRKFRSFDPQGALGNTATAKYNLDILIKRSNSTA
AVN
>gi|283145786|gb|ADB13157.1| MHC class II antigen, partial [Ailuropoda melanoleuca]
DHVAYYGINVYQSYGPSGQYTHEFDGDEEFYVDLEKKETVWRLPMFSTFASFDPQGALRNLAIAKQNLNILIKLSNYTAA
TN
>gi|220981798|emb|CAX17691.1| MHC class II antigen [Oryx dammah] >gi|220981800|emb|CAX17692.1| MHC class II antigen [Connochaetes taurinus]
DHVIIQAEFYLNPEQSAEFMFDFDGDEIFHVDMQKKETVWRLPEFGHFASFEAQGALANMAVMKANLDVMTKRSNNTPNT
N
>gi|13161203|gb|AAK13505.1|AF343734_1 MHC class II antigen alpha chain, partial [Canis lupus familiaris] >gi|15866650|emb|CAC84380.1| MHC class II antigen [Canis lupus familiaris] >gi|15866654|emb|CAC84381.1| MHC class II antigen [Canis lupus familiaris]
DHVAYYGINVYQSYGPSGQYTHEFDGDEEFYVDLEKKETVWRLPVFSTFASFDPQGALRNLAIAKQNLNIMTKRSNQTAA
TN
>gi|283145827|gb|ADB13158.1| MHC class II antigen, partial [Ailuropoda melanoleuca]
DHVAYYGINVYQSYGPSGQYTHEFDGDELFYVDLEKKETVWRLPMFSTFETFDPQGALRNLAIAKQNLNILIKLSNYTAA
TN
>gi|45724983|emb|CAG23903.1| MHC class II antigen [Mus spretus]
ADHVGVYGTTVYQSPGDIGQYTLEFDGDEWFYVDLDKKETIWMLPEFGQLTSFDPQGGLQNIATGKYTLGILTKRSNSTP
ATNGTCSHP
>gi|45724997|emb|CAG23910.1| MHC class II antigen [Mus musculus]
ADHVGTYGTTVYQSPGDIGQYTHEFDGDELFYVDLDKKKTVWRLPEFGQLILFEPQGGLQYIAAEKHNLGILTKRSNFTP
ATNGTCSHP
>gi|45724999|emb|CAG23911.1| MHC class II antigen [Mus musculus molossinus]
ADHVGSYGISVYQSPGDIGQYTHEFDGDEWFYVDLDKKETVWMLPEFGQLTSFDPQGGLQNIATGKHNLGILTKRSNFTP
PTNGACSHP
>gi|50402015|gb|AAT76516.1| MHC class II antigen [Capra hircus]
DHIGIYGVNVYQTYGPSGYFTHEFDGDEEFYVDLEKRETVWRLPEFSKFTSFDPQGALRNIATAKHNLEILIQRSNSTAA
TN
>gi|111183185|gb|ABH07912.1| MHC class II antigen [Canis rufus]
DHVAYYGINVYQSYGPSGQYTHEFDGDEEFYVDLEKKETVWRLPVFSTFTSFDPQGALRNLAIAKQNLNIMTKRSNQTAA
TN
>gi|98985888|emb|CAJ58458.1| MHC class II antigen [Canis lupus familiaris]
DHVAYYGINVYQSYGPSGQYTHEFDGDEEFYVDLEKKETVWRLPVFSTFTSFDPQGALRNLAIAKQNLNIMTKRSNKTAA
TN
>gi|86517115|gb|ABC96096.1| MHC class II antigen DQA [Lepus yarkandensis]
ADHVGSYGINVHQSYGPSGQYTHEFDGDEEFYVDLDNKETIWRLPEFSRFASFDPQGALGNIATAKYNLDILIKCSNSTA
AVN
>gi|309400350|gb|ADO79601.1| MHC class II antigen [Microcebus murinus]
DHVGAYGINIYQSYGPNGQYTQEFDGDELFYVDLQRRETVWRLPEFSKFAGFDPQGALRNIATAKHNLDILIKRSNSTAA
TN
>gi|29501673|gb|AAO73056.1| MHC class II antigen [Ovis aries]
DHIGTYGVNIYQTYGPSGYYTHEFDGDEEFHVDLEKRETVWRLPEFSKFTSFDPQGALRNIATVKHNLEILIQRSNSTAA
TN
>gi|29501675|gb|AAO73057.1| MHC class II antigen [Ovis aries]
DHIGIYGVNVYQTYGPSGYYTHEFDGDEEFYVDLEKRETVWRLPEFSKFTSFDPQGALRNIATTKHNLEILIQMSNSTAA
TN
>gi|309400346|gb|ADO79599.1| MHC class II antigen [Microcebus murinus]
DHVGAYGINIYQSYGPAGQYTQEFDGDEEFYVDLQRRETVWRLPEFSKFTSFDPQGALRNIATAKYNLDLLIKRSNSTAA
TN
>gi|40950160|gb|AAR97720.1| major histocompatibility class II DQA1 [Capra hircus]
DHIGIYGVNVYQTYGPSGYFTHEFDGDEEFYVDLEKKETVWHLPVFSQFRRFDPQGALRNIAAAKHNLEITIQRSNSTAA
TN
>gi|2231424|gb|AAB62023.1| MHC class II antigen, partial [Bos taurus]
DHIGTYGISIYHTYGPSGYYTHEFDGDEEFYVDLEKRETVWRLPVFSKFATFDPQGALRNIATMKHNLEIVIQRSNSTAA
TN
>gi|45725003|emb|CAG23913.1| MHC class II antigen [Mus musculus]
ADHVGFYGTTVYQSPGDIGQYTHEFDGDELFYVDLDKKETVWVLPEFAQLRSFEPQGGLQNIAAGKYNLEILIKDSNSTP
ATNGTCSHP
>gi|45725005|emb|CAG23914.1| MHC class II antigen [Mus musculus]
ADHVGFYGITVYQSPGDIGQYTHEFDGDELFYVDLDKKETVWVLPEFAQLRSFEPQGGLQNIAAGKYNLEILIKSSNSTP
ATNGTCSHP
>gi|4688664|emb|CAB41409.1| dog leucocyte antigen DQA [Canis lupus familiaris]
DHVAYYGINVYQSYGPSGQYTHEFDGDEEFYVDLEKKETVWRLPVFSTFRSFDPQGALRNLAIAKQNLNILTKSSNQTAA
TN
>gi|2231436|gb|AAB62029.1| MHC class II antigen, partial [Bos taurus]
DHIGAYGINVYHTYGPSGYYTHEFDGDEEFYVDLEKRETVWRLPVFSKFTSFDPQGALRNIATVKHNLEILIQRSNSTAA
TN
>gi|4886586|gb|AAD31946.1|U89288_1 MHC class II H2-E alpha chain precursor [Mus musculus musculus] >gi|4886588|gb|AAD31947.1|U89289_1 MHC class II H2-E alpha chain precursor [Mus spretus] >gi|4886590|gb|AAD31948.1|U89290_1 MHC class II H2-E alpha chain precursor [Mus macedonicus] >gi|4886592|gb|AAD31949.1|U89291_1 MHC class II H2-E alpha chain precursor [Mus spicilegus]
DHTIIQAEFYLLPDKRGEFMFDFDGDEIFHVDIEKSETIWRLEEFAKFASFEAQGALANIAVDKANLDVMKERSNNTPDA
N
>gi|45724995|emb|CAG23909.1| MHC class II antigen [Mus spicilegus]
ADHVGFYGTTVYQSPGDIGQYTHEFDGDELFYVDLDKKKTVWRLPEFGQLALFDPQGGLLNIAAEKHNLGILTKRSNFTP
ATNGACSHP
>gi|2231434|gb|AAB62028.1| MHC class II antigen, partial [Bos taurus]
DHIGAYGINVYHTYGPSGYYTHEFDGDEEFYVDLEKRETVWRLPVFSKFTSFDPQGALRNIATAKHNLEVLIQRSNSTAA
TN
>gi|511927094|ref|XP_004782652.1| PREDICTED: SLA class II histocompatibility antigen, DQ haplotype D alpha chain-like, partial [Mustela putorius furo]
HVASYGINVYQSYGPSGQFTHEFDGDEEFYVDLEKKETVWRLPVFSTFGSFDPQGALRNLAIAKQNLNILIKLYNYTAAT
N
>gi|2231422|gb|AAB62022.1| MHC class II antigen, partial [Bos taurus]
DHIGTYGISIYHTYGPSGYYTHEFDGDEEFYVDLEKRETVWRLPVFSKFATFDPQGALRNIATTKHNLEIVIQRSNSTAA
TN
>gi|97973849|dbj|BAE94369.1| MHC class II antigen [Bos taurus] >gi|116078077|dbj|BAF34902.1| MHC class II antigen [Bos taurus]
DHIGTYGISIYHTYGPSGYYTHEFDGDEEFYVDLEKRETVWRLPVFSKFTSFDPQGALRNIAIVKHNLEIVIQRSNSTAA
>gi|408004555|gb|AFU53994.1| MHC class II antigen, partial [Rhinopithecus roxellana] >gi|408004563|gb|AFU53998.1| MHC class II antigen, partial [Rhinopithecus roxellana] >gi|408004571|gb|AFU54002.1| MHC class II antigen, partial [Rhinopithecus roxellana] >gi|408004581|gb|AFU54007.1| MHC class II antigen, partial [Rhinopithecus roxellana]
DHVASYGVNFYQFYGSSGQYTHEFDGDEQFYVDLERKETVWRLPLFSRFAGFDPQGALRNIAVGKQTLNMMIKRSNSTAA
TN
>gi|18266153|gb|AAL67482.1|AF458953_1 MHC class II DQ alpha 1 domain [Alces alces]
DHIGTYGINVYHSYGPSGHYTHEFDGDEEFYVDLEKKETVWRLPVFSKFAGFDPQGALRNIALMKNALEILIQRSNSTAA
TN
>gi|309400356|gb|ADO79604.1| MHC class II antigen [Microcebus murinus]
DHLGAYGINVYQSYGPAGQYTHEFDGDEEFYVDLQRRETVWRLPEFSKFAGFDPQGALRNIAAAKYNLDLLIKRSNSTAA
TN
>gi|510032715|gb|AGN32854.1| MHC class II antigen, partial [Macaca mulatta]
DHVASYGVNVYQSYGPSGQFTHEFDGDEQFYVDLGRKETVWRLPIPYRYGFDPQFALRNIAVLTHNLNILIKRSNSTAAT
N
>gi|2231426|gb|AAB62024.1| MHC class II antigen, partial [Bos taurus]
DHIGAYGINVYHTYGPSGYYTHEFDGDEEFYVDLEKRETVWRLPVFSKFATFDPQGALRNIATMKHNLEIVIQRSNSTAA
TN
>gi|30267912|gb|AAP21811.1| MHC class II antigen [Ovis aries]
DHIGTYGVNVYQTYGSSGYYTHEFDGDEQFYVDLEKRETVWRLPMFSEVGYFDAQFALRNIATFKHNLELMIQRSNSTAA
TN
>gi|572937922|gb|AHF58470.1| MHC class II antigen alpha chain, partial [Tursiops truncatus]
DHVGSYGTTIYQSFGPSGQYTQEFDGDELFYVDLEKKETVWRLPVFSEFAGFDPQGALRNTAVAKQNLDILIKRSNFTPV
TN
>gi|4886584|gb|AAD31945.1|U89287_1 MHC class II H2-E alpha chain precursor [Mus musculus musculus] >gi|53098|emb|CAA38299.1| I-E alpha MHC class II [Mus musculus]
EHTIIQAEFYLLPDKRGEFMFDFDGDEIFHVDIEKSETIWRLEEFAKFASFEAQGALANIAVDKANLDVMKERSNNTPDA
N
>gi|2231420|gb|AAB62021.1| MHC class II antigen, partial [Bos taurus]
DHIGTYGISIYHTYGPSGYYTHEFDGDEEFYVDLEKRETVWRLPVFSKFATFDPQGALRNIATSKHDLEVLIQRSNSTAA
TN
>gi|506971178|gb|AGM33198.1| MHC class II antigen, partial [Bos taurus]
DHIGAYGINVYHTYGPSGHYTHEFDGDEEFYVDLEKRETVWRLPVFSKFTSFDPQGALKNIATAKHNLEVLLQRSNSSAA
TN
>gi|157734598|dbj|BAF80715.1| MHC class II antigen [Bos taurus]
DHIGAYGINVYHTYGPSGYYTHEFDGDEEFYVDLEKRETVWRLPVFSKFTSFDPQGALRNIAIVKHNLDIVIQRSNSTAA
>gi|510032712|gb|AGN32853.1| MHC class II antigen, partial [Macaca mulatta]
DHVASYGVNVYQSYGPSGQYSHEFDGDEQFYVDLGRKETVWRLPIPYRYGFDPQFALRNIAVLTHNLNILIKRSNSTAAT
N
>gi|506971184|gb|AGM33201.1| MHC class II antigen, partial [Bos taurus]
DHIGTYGISIYHTYGPSGYFTHEFDGDEEFYVDLEKRETVWRLPVFSKFATFDPQGALKNIATAKHNLEIVIQRSTSTAA
TN
>gi|4886582|gb|AAD31944.1|U89286_1 MHC class II H2-E alpha chain precursor [Mus caroli]
EHTIIQAEFYLLPDKRGEFMFDFDGDEIFHVDIEKSETIWRLEEFAKFASFEAQGALANIAVDKANLEVMKKRSNNTPDA
N
>gi|29501671|gb|AAO73055.1| MHC class II antigen [Ovis aries]
DHIGTYGVNVYQTYGPSGYFTHEFDGDEQFYVDLEKRETVWRLPMFSKFGDFDPQFALRNIATLKHNLELIIQRSNSTAA
TN
>gi|2231414|gb|AAB62018.1| MHC class II antigen, partial [Bos taurus]
DHIGAYGINVYHTYGPSGYYTHEFDGDEEFYVDLEKRETVWNLPLFSKFRRFDPQGALRNIATVKHNLEIVIQRSNSTAA
TN
>gi|4886578|gb|AAD31942.1|U89284_1 MHC class II H2-E alpha chain precursor [Mus cookii] >gi|4886580|gb|AAD31943.1|U89285_1 MHC class II H2-E alpha chain precursor [Mus cervicolor]
EHTIIQAEFYLLPDKRGEFMFDFDGDEIFHVDIEKSETIWRLEEFAKFASFEAQGALANIAVDKANLEIMKKRSNNTPDA
N
>gi|2231432|gb|AAB62027.1| MHC class II antigen, partial [Bos taurus]
DHIGAYGINVYHTYGPSGYYTHEFDGDEEFYVDLEKRETVWRLPVFSKFTSFDPQGALRNIATTKHNLEIMIRRSNSTAA
TN
>gi|55832210|gb|AAV66432.1| MHC class II DQ-alpha chain [Bison bison]
TYGTDFYQSHGPSGQYIHQFDGDEEFYVDLEKEEAVWRLPMFDKLRFHPQGALRNIAVAKHNLDVLTKCYNFTPVINEVP
EVTVFSKSPVMLS
>gi|2231410|gb|AAB62016.1| MHC class II antigen, partial [Bos taurus]
DHIGAYGINVYHSYGPSGYYTHEFDGDEEFYVDLEKRETVWNLPLFSKFRRFDPQGALRNIATAKHNLEVLIQRSNSTTA
TN
>gi|9280557|gb|AAF86469.1| MHC class II antigen [Ovis aries]
DHIGTYGVNVYQTYGPSGYYTHEFDGDEQFYVDLEKRETVWRLPMFSKFGDFDPQFALRNIATLKHNLELIIQRSNSTAA
TN
>gi|116078085|dbj|BAF34906.1| MHC class II antigen [Bos taurus]
DHIGTYGISIYHTYGPSGYYTHEFDGDEEFYVDLEKRETVWRLPVFSKFATFDPQGALRNIATMKHNLEIVIQRSNSTAA
>gi|158530369|gb|ABW71893.1| MHC class II antigen [Bison bonasus]
ADHVGSYGTEIYQSHGPSGQYTQEFDGDEMFYVDLGKKETVWRLPMFSQFAGFDPQAALSEIATSKHNLDVLTKRSNFTP
VINGKCPPITS
>gi|117969884|dbj|BAF36751.1| MHC class II antigen [Bos taurus]
DHIGAYGINVYHTYGPSGYYTHEFDGDEEFYVDLEKRETVWRLPVFSKFTSFDPQGALRNIATVKHNLEILIQRSNSTAA
>gi|9280555|gb|AAF86468.1| MHC class II antigen [Ovis aries]
DHIAAYGINVYHKYGPSGYYTHEFDGDEEFYVDLEKRETVWHLPMFSKFRRFDPQGALRNIAAAKHNLEVLIQDSNSTAA
TN
>gi|2231412|gb|AAB62017.1| MHC class II antigen, partial [Bos taurus]
DHIGAYGINIYHTYGPSGYYTHEFDGDEEFYVDLEKRETVWNLPLFSKFRRFDPQGALRNIATAKHNLEIVIQRSNSTAA
TN
>gi|2231416|gb|AAB62019.1| MHC class II antigen, partial [Bos taurus]
DHIGAYGINVYHSYGPSGYYTHEFDGDEQFYVDLEKRETVWRLPVFSKFASFDPQGALRNIATAKHNLEIMIQESNSTAA
TN
>gi|116078065|dbj|BAF34896.1| MHC class II antigen [Bos taurus]
DHIGAYGINVYHTYGPSGYYTHEFDGDEEFYVDLEKRETVWRLPVFSKFTSFDPQGALRNIATAKHNLEVLIQRSNSTAA
>gi|283146039|gb|ADB13164.1| MHC class II antigen, partial [Ailuropoda melanoleuca]
DHVAYYGINVYQSYGPSGQYTHEFDGDELFYVDLEKKETVWRPPMFSTFETFDPQGALRSLAIAKQNLDILIKLSNYTAA
TN
>gi|2231418|gb|AAB62020.1| MHC class II antigen, partial [Bos taurus]
DHIGAYGINVYHSYGPSGYYTHEFDGDEQFYVDLEKRETVWRLHVFSKFASFDPQGALRNIATAKHNLEIMIQESNSTAS
TN
>gi|12744479|gb|AAK06650.1|AF317616_1 MHC class II antigen [Ovis aries]
DHIGTYGVNVYQTYGPSGYYTHEFDGDEEFYVDLEKRETVWRLPMFSEVGYFDPQFALRNIATFKHNLELMIQRSNSTAA
TN
>gi|116078079|dbj|BAF34903.1| MHC class II antigen [Bos taurus] >gi|116078081|dbj|BAF34904.1| MHC class II antigen [Bos taurus]
DHIGTYGISIYHTYGPSGYYTHEFDGDEEFYVDLEKRETVWRLPVFSKFATFDPQGALRNIATTKHNLEIVIQRSNSTAA
>gi|2231406|gb|AAB62014.1| MHC class II antigen, partial [Bos taurus]
DHIGAYGINVYHSYGPSGYYTHEFDGDEEFYVDLEKRETVWRLPVFSKFASFDPQGALRNIAVGKRTLEVMIRRSNSTAA
TN
>gi|2231408|gb|AAB62015.1| MHC class II antigen, partial [Bos taurus]
DHIGAYGINVYHSYGPSGYYTHEFDGDEEFYVDLEKRETVWNLPLFSKFRRFDPQGALRNIATTKHNLEIMMQRSNSTAA
TN
>gi|116078061|dbj|BAF34894.1| MHC class II antigen [Bos taurus]
DHIGTYGISIYHTYGPSGYYTHEFDGDEEFYVDLEKRETVWRLPVFSKFATFDPQGALRNIATSKHDLEVLIQRSNSTAA
>gi|157734600|dbj|BAF80716.1| MHC class II antigen [Bos taurus]
DHIGTYGISIYHSYGPSGYYTHEFDGDEEFYVDLEKRETVWRLPVFSKFATFDPQGALRNIATTKHNLEIVIQRSNSTAA
>gi|110835663|dbj|BAF02287.1| MHC class II antigen [Bos taurus] >gi|116078067|dbj|BAF34897.1| MHC class II antigen [Bos taurus]
DHIGAYGINVYHTYGPSGYYTHEFDGDEEFYVDLEKRETVWNLPLFSKFRRFDPQGALRNIATVKHNLEIVIQRSNSTAA
>gi|116078075|dbj|BAF34901.1| MHC class II antigen [Bos taurus]
DHIGAYGINVYHTYGPSGYYTHEFDGDEEFYVDLEKRETVWRLPVFSKFTSFDPQGALRNIATTKHNLEIMIRRSNSTAA
>gi|116078073|dbj|BAF34900.1| MHC class II antigen [Bos taurus]
DHIGAYGINVYHSYGPSGYYTHEFDGDEEFYVDLEKRETVWNLPLFSKFRRFDPQGALRNIATAKHNLEVLIQRSNSTTA
>gi|116078083|dbj|BAF34905.1| MHC class II antigen [Bos taurus]
DHIGAYGINVYHSYGPSGYYTHEFDGDEEFYVDLEKRETVWRLPVFSKFASFDPQGALRNIAVGKRTLEVMIQRSNSTAA
>gi|116078069|dbj|BAF34898.1| MHC class II antigen [Bos taurus]
DHIGAYGINIYHTYGPSGYYTHEFDGDEEFYVDLEKRETVWNLPLFSKFRRFDPQGALRNIATAKHNLEIVIQRSNSTAA
>gi|116078063|dbj|BAF34895.1| MHC class II antigen [Bos taurus]
DHIGAYGINVYHSYGPSGYYTHEFDGDEQFYVDLEKRETVWRLPVFSKFASFDPQGALRNIATAKHNLEIMIQESNSTAA
>gi|157734596|dbj|BAF80714.1| MHC class II antigen [Bos taurus]
DHIGAYGINVYHSYGPSGYYTHEFDGDEEFYVDLEKRETVWRLPVFSKFASFDPQGALRNIAVGKRTLEVMIRRSNSTAA
>gi|116078071|dbj|BAF34899.1| MHC class II antigen [Bos taurus]
DHIGAYGINVYHSYGPSGYYTHEFDGDEEFYVDLEKRETVWNLPLFSKFRRFDPQGALRNIATTKHNLEIMMQRSNSTAA
>gi|221043500|dbj|BAH13427.1| unnamed protein product [Homo sapiens]
MAISGVPVLGFFIIAVLMSAQESWAIKEEHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFE
APTILRSPMVPPSLLHSWTWESIV
